THEORETICAL STUDIES OF BILIPROTEIN CHROMOPHORES AND RELATED BILE PIGMENTS BY MOLECULAR ORBITAL AND RAMACHANDRAN TYPE CALCULATIONS

Ramachandran calculations have been used to gain insight into steric hindrance in bile pigments related to biliprotein chromophores. The high optical activity of denatured phycocyanin, as compared to phycoerythrin, has been related to the asymmetric substitution at ring A, which shifts the equilibrium towards the P-helical form of the chromophore. Geometric effects on the electronic structures and transitions have then been studied by molecular orbital calculations for several conjugation systems including the chromophores of phycocyanin. phytochrome P,, cations, cation radicals and tautomeric forms. For these different chromophores some general trends can be deduced. For instance, for a given change in the gross shape (e.g. either unfolding of the molecule from a cyclic-helical to a fully extended geometry, or upon out-of-plane twists of the pyrrole ring A) of the molecules under study, the predicted absorption spectra all change in a simikar way. Nonetheless, there are characteristic distinctions between the different n-systems, both in the transition energies and the charge distribution, which can be related to their known differences in spectroscopic properties and their reactivity

Hemophagocytic syndrome caused by primary herpes simplex virus 1 infection: report of a first case

Introduction: Hemophagocytic syndrome represents a severe hyperinflammatory condition by activated macrophages. Leading viral triggering agents are Epstein-Barr virus (EBV), cytomegalovirus (CMV), and adenovirus. Materials and methods: We present a patient with Wegener's granulomatosis on azathioprine and prednisone medication, who developed a life-threatening hemophagocytic syndrome. Positive plasma polymerase chain reaction (PCR) with negative serology revealed a primary, disseminated infection with herpes simplex virus-1 as the triggering pathogen. After treatment with acyclovir, high-dose steroids, immunoglobulins, and etoposide, the patient recovered. Conclusion: Early diagnosis of potentially underlying infections of hemophagocytic syndrome influences the therapeutic approach. It is important to consider a variety of infectious agents, particularly in immunosuppressed individuals. The reported case emphasizes the importance of screening for herpes simplex virus

Angular dependence of domain wall resistivity in SrRuO3_{{\bf 3}} films

${\rm SrRuO_3}$ is a 4d itinerant ferromagnet (T$_{c}$ $\sim$150 K) with stripe domain structure. Using high-quality thin films of SrRuO$_{3}$ we study the resistivity induced by its very narrow ($\sim 3$ nm) Bloch domain walls, $\rho_{DW}$ (DWR), at temperatures between 2 K and T$_{c}$ as a function of the angle, $\theta$, between the electric current and the ferromagnetic domains walls. We find that $\rho_{DW}(T,\theta)=\sin^2\theta \rho_{DW}(T,90)+B(\theta)\rho_{DW}(T,0)$ which provides the first experimental indication that the angular dependence of spin accumulation contribution to DWR is $\sin^2\theta$. We expect magnetic multilayers to exhibit a similar behavior.Comment: 5 pages, 5 figure

Preoperative and perioperative use of levosimendan in cardiac surgery: European expert opinion

In cardiac surgery, postoperative low cardiac output has been shown to correlate with increased rates of organ failure and mortality. Catecholamines have been the standard therapy for many years, although they carry substantial risk for adverse cardiac and systemic effects, and have been reported to be associated with increased mortality. On the other hand, the calcium sensitiser and potassium channel opener levosimendan has been shown to improve cardiac function with no imbalance in oxygen consumption, and to have protective effects in other organs. Numerous clinical trials have indicated favourable cardiac and non-cardiac effects of preoperative and perioperative administration of levosimendan. A panel of 27 experts from 18 countries has now reviewed the literature on the use of levosimendan in on-pump and off-pump coronary artery bypass grafting and in heart valve surgery. This panel discussed the published evidence in these various settings, and agreed to vote on a set of questions related to the cardioprotective effects of levosimendan when administered preoperatively, with the purpose of reaching a consensus on which patients could benefit from the preoperative use of levosimendan and in which kind of procedures, and at which doses and timing should levosimendan be administered. Here, we present a systematic review of the literature to report on the completed and ongoing studies on levosimendan, including the newly commenced LEVO-CTS phase III study (NCT02025621), and on the consensus reached on the recommendations proposed for the use of preoperative levosimendan

Resistance of a domain wall in the quasiclassical approach

Starting from a simple microscopic model, we have derived a kinetic equation for the matrix distribution function. We employed this equation to calculate the conductance $G$ in a mesoscopic F'/F/F' structure with a domain wall (DW). In the limit of a small exchange energy $J$ and an abrupt DW, the conductance of the structure is equal to $G_{2d}=4\sigma_{\uparrow}\sigma_{\downarrow }/(\sigma_{\uparrow}+\sigma_{\downarrow})L$. Assuming that the scattering times for electrons with up and down spins are close to each other we show that the account for a finite width of the DW leads to an increase in this conductance. We have also calculated the spatial distribution of the electric field in the F wire. In the opposite limit of large $J$ (adiabatic variation of the magnetization in the DW) the conductance coincides in the main approximation with the conductance of a single domain structure $G_{1d}=(\sigma_{\uparrow}+\sigma_{\downarrow})/L$. The account for rotation of the magnetization in the DW leads to a negative correction to this conductance. Our results differ from the results in papers published earlier.Comment: 11 pages; replaced with revised versio

Thermal Equilibrium Curves and Turbulent Mixing in Keplerian Accretion Disks

We consider vertical heat transport in Keplerian accretion disks, including the effects of radiation, convection, and turbulent mixing driven by the Balbus-Hawley instability, in astronomical systems ranging from dwarf novae (DNe), and soft X-ray transients (SXTs), to active galactic nuclei (AGN). We propose a modified, anisotropic form of mixing-length theory, which includes radiative and turbulent damping. We also include turbulent heat transport, which acts everywhere within disks, regardless of whether or not they are stably stratified, and can move entropy in either direction. We have generated a series of vertical structure models and thermal equilibrium curves using the scaling law for the viscosity parameter $\alpha$ suggested by the exponential decay of the X-ray luminosity in SXTs. We have also included equilibrium curves for DNe using an $\alpha$ which is constant down to a small magnetic Reynolds number ($\sim 10^4$). Our models indicate that weak convection is usually eliminated by turbulent radial mixing. The substitution of turbulent heat transport for convection is more important on the unstable branches of thermal equilibrium S-curves when $\alpha$ is larger. The low temperature turnover points $\Sigma_{max}$ on the equilibrium S-curves are significantly reduced by turbulent mixing in DNe and SXT disks. However, in AGN disks the standard mixing-length theory for convection is still a useful approximation when we use the scaling law for $\alpha$, since these disks are very thin at the relevant radii. In accordance with previous work, we find that constant $\alpha$ models give almost vertical S-curves in the $\Sigma-T$ plane and consequently imply very slow, possibly oscillating, cooling waves.Comment: 43 pages, 12 figures, 6 tables, to be published in Ap

Negative Domain Wall Resistance in Ferromagnets

The electrical resistance of a diffusive ferromagnet with magnetic domain walls is studied theoretically, taking into account the spatial dependence of the magnetization. The semiclassical domain wall resistance is found to be either negative or positive depending on the difference between the spin-dependent scattering life-times. The predictions can be tested experimentally by transport studies in doped ferromagnets.Comment: 4 pages, 2 figures, accepted Phys. Rev. Let

Accretion Disks around Young Objects. I. The Detailed Vertical Structure

We discuss the properties of an accretion disk around a star with parameters typical of classical T Tauri stars (CTTS), and with the average accretion rate for these disks. The disk is assumed steady and geometrically thin. The turbulent viscosity coefficient is expressed using the alpha prescription and the main heating mechanisms considered are viscous dissipation and irradiation by the central star. The energy is transported by radiation, turbulent conduction and convection. We find that irradiation from the central star is the main heating agent of the disk, except in the innermost regions, R less than 2 AU. The irradiation increases the temperature of the outer disk relative to the purely viscous case. As a consequence, the outer disk (R larger than 5 AU) becomes less dense, optically thin and almost vertically isothermal, with a temperature distribution T proportional to R^{-1/2}. The decrease in surface density at the outer disk, decreases the disk mass by a factor of 4 respect to a purely viscous case. In addition, irradiation tends to make the outer disk regions stable against gravitational instabilities.Comment: 41 pages, 14 postscript figures, LaTeX, accepted by Ap

The derivation of the formyl-group oxygen of chlorophyll b in higher plants from molecular oxygen.

The mechanism of formation of the formyl group of chlorophyll b has long been obscure but, in this paper, the origin of the 7-formyl-group oxygen of chlorophyll b in higher plants was determined by greening etiolated maize leaves, excised from dark-grown plants, by illumination under white light in the presence of either H218O or 18O2 and examining the newly synthesized chlorophylls by mass spectroscopy. To minimize the possible loss of 18O label from the 7-formyl substituent by reversible formation of chlorophyll b-71-gem-diol (hydrate) with unlabelled water in the cell, the formyl group was reduced to a hydroxymethyl group during extraction with methanol containing NaBH4: chlorophyll a remained unchanged during this rapid reductive extraction process. Mass spectra of chlorophyll a and [7-hydroxymethyl]-chlorophyll b extracted from leaves greened in the presence of either H218O or 18O2 revealed that 18O was incorporated only from molecular oxygen but into both chlorophylls: the mass spectra were consistent with molecular oxygen providing an oxygen atom not only for incorporation into the 7-formyl group of chlorophyll b but also for the well-documented incorporation into the 131-oxo group of both chlorophylls a and b [see Walker, C. J., Mansfield, K. E., Smith, K. M. & Castelfranco, P. A. (1989) Biochem. J. 257, 599–602]. The incorporation of isotope led to as much as 77% enrichment of the 131-oxo group of chlorophyll a: assuming identical incorporation into the 131 oxygen of chlorophyll b, then enrichment of the 7-formyl oxygen was as much as 93%. Isotope dilution by re-incorporation of photosynthetically produced oxygen from unlabelled water was negligible as shown by a greening experiment in the presence of 3-(3,4-dichlorophenyl)-1,1-dimethylurea. The high enrichment using 18O2, and the absence of labelling by H218O, unequivocally demonstrates that molecular oxygen is the sole precursor of the 7-formyl oxygen of chlorophyll b in higher plants and strongly suggests a single pathway for the formation of the chlorophyll b formyl group involving the participation of an oxygenase-type enzyme

Explosion dynamics of pyroclastic eruptions at Santiaguito Volcano

In Jan. 2003 we monitored explosions at Santiaguito Volcano (Guatemala) with thermal, infrasonic, and seismic sensors. Thermal data from 2 infrared thermometers allowed computation of plume rise speeds, which ranged from 8 to 20 m/s. Rise rates correlated with cumulative thermal radiance, indicating that faster rising plumes correspond to explosions with greater thermal flux. The relationship between rise speeds and elastic energy is less clear. Seismic radiation may not scale well with thermal output and/or rise speed because some of the thermal component may be associated with passive degassing, which does not induce significant seismicity. But non-impulsive gas release is still able to produce a high thermal flux, which is the primary control on buoyant rise speed