Concatenation of convolutional and block codes Final report

Comparison of concatenated and sequential decoding systems and convolutional code structural propertie

A comparison of spectral element and finite difference methods using statically refined nonconforming grids for the MHD island coalescence instability problem

A recently developed spectral-element adaptive refinement incompressible magnetohydrodynamic (MHD) code [Rosenberg, Fournier, Fischer, Pouquet, J. Comp. Phys. 215, 59-80 (2006)] is applied to simulate the problem of MHD island coalescence instability (MICI) in two dimensions. MICI is a fundamental MHD process that can produce sharp current layers and subsequent reconnection and heating in a high-Lundquist number plasma such as the solar corona [Ng and Bhattacharjee, Phys. Plasmas, 5, 4028 (1998)]. Due to the formation of thin current layers, it is highly desirable to use adaptively or statically refined grids to resolve them, and to maintain accuracy at the same time. The output of the spectral-element static adaptive refinement simulations are compared with simulations using a finite difference method on the same refinement grids, and both methods are compared to pseudo-spectral simulations with uniform grids as baselines. It is shown that with the statically refined grids roughly scaling linearly with effective resolution, spectral element runs can maintain accuracy significantly higher than that of the finite difference runs, in some cases achieving close to full spectral accuracy.Comment: 19 pages, 17 figures, submitted to Astrophys. J. Supp

A review of the clinical utility of the Enhanced Liver Fibrosis test in multiple aetiologies of chronic liver disease

The rising incidence of chronic liver disease continues to be an increasing health burden. The morbidity and mortality associated with chronic liver disease typically occur in patients with advanced fibrosis. Hence, early identification of those at-risk is of vital importance to ensure appropriate ongoing management. Currently, tools for appropriate risk stratification remain limited. Increasing awareness of the limitations of liver biopsy has driven research into alternative non-invasive methods of fibrosis assessment including serological markers assessing functional changes. One such biomarker, the Enhanced Liver Fibrosis test, was initially validated in a cohort of 1021 patients with mixed aetiology chronic liver disease and shown to perform well. Since this pathfinder study, it has been independently validated in cohorts of hepatitis C, non-alcoholic fatty liver disease, alcoholic liver disease, primary biliary cirrhosis and primary sclerosing cholangitis. In addition to performing well as a diagnostic tool, the Enhanced Liver Fibrosis test has been shown to outperform liver biopsy in prognostic studies and is the only non-invasive marker to do so. However, questions remain regarding the use of this test, particularly regarding the possible effect age and alcohol may have on test scores. This review examines the current literature published in relation to the Enhanced Liver Fibrosis test and its clinical utility and highlights areas requiring further study

The Arecibo L-band Feed Array Zone of Avoidance Survey I: Precursor Observations through the Inner and Outer Galaxy

The Arecibo L-band Feed Array (ALFA) is being used to conduct a low-Galactic latitude survey, to map the distribution of galaxies and large-scale structures behind the Milky Way through detection of galaxies' neutral hydrogen (HI) 21-cm emission. This Zone of Avoidance (ZOA) survey finds new HI galaxies which lie hidden behind the Milky Way, and also provides redshifts for partially-obscured galaxies known at other wavelengths. Before the commencement of the full survey, two low-latitude precursor regions were observed, totalling 138 square degrees, with 72 HI galaxies detected. Detections through the inner Galaxy generally have no cataloged counterparts in any other waveband, due to the heavy extinction and stellar confusion. Detections through the outer Galaxy are more likely to have 2MASS counterparts. We present the results of these precursor observations, including a catalog of the detected galaxies, with their HI parameters. The survey sensitivity is well described by a flux- and linewidth-dependent signal-to-noise ratio of 6.5. ALFA ZOA galaxies which also have HI measurements in the literature show good agreement between our measurements and previous work. The inner Galaxy precursor region was chosen to overlap the HI Parkes Zone of Avoidance Survey so ALFA performance could be quickly assessed. The outer Galaxy precursor region lies north of the Parkes sky. Low-latitude large-scale structure in this region is revealed, including an overdensity of galaxies near l = 183 deg and between 5000 - 6000 km/s in the ZOA. The full ALFA ZOA survey will be conducted in two phases: a shallow survey using the observing techniques of the precursor observations, and also a deep phase with much longer integration time, with thousands of galaxies predicted for the final catalog.Comment: 26 pages, 7 figures, 2 tables, Astronomical Journal accepte

Distinct expression pattern of the full set of secreted phospholipases A2 in human colorectal adenocarcinomas: sPLA2-III as a biomarker candidate

Recent studies suggest that secreted phospholipases A2 (sPLA2s) represent attractive potential tumour biomarkers and therapeutic targets for various cancers. As a first step to address this issue in human colorectal cancer, we examined the expression of the full set of sPLA2s in sporadic adenocarcinomas and normal matched mucosa from 21 patients by quantitative PCR and immunohistochemistry. In normal colon, PLA2G2A and PLA2G12A were expressed at high levels, PLA2G2D, PLA2G5, PLA2G10 and PLA2G12B at moderate levels, and PLA2G1B, PLA2G2F and PLA2G3 at low levels. In adenocarcinomas from left and right colon, the expression of PLA2G3 was increased by up to 40-fold, while that of PLA2G2D and PLA2G5 was decreased by up to 23- and 14-fold. The variations of expression for sPLA2-IID, sPLA2-III and sPLA2-V were confirmed at the protein level. The expression pattern of these sPLA2s appeared to be linked respectively to the overexpression of interleukin-8, defensin α6, survivin and matrilysin, and downregulation of SFRP-1 and RLPA-1, all these genes being associated to colon cancer. This original sPLA2 profile observed in adenocarcinomas highlights the potential role of certain sPLA2s in colon cancer and suggests that sPLA2-III might be a good candidate as a novel biomarker for both left and right colon cancers

Dynamics of the Destruction and Rebuilding of a Dipole Gap in Glasses

After a strong electric bias field was applied to a glass sample at temperatures in the millikelvin range its AC-dielectric constant increases and then decays logarithmically with time. For the polyester glass mylar we have observed the relaxation of the dielectric constant back to its initial value for several temperatures and histories of the bias field. Starting from the dipole gap theory we have developed a model suggesting that the change of the dielectric constant after transient application of a bias field is only partly due to relaxational processes. In addition, non-adiabatic driving of tunneling states (TSs) by applied electric fields causes long lasting changes in the dielectric constant. Moreover, our observations indicate that at temperatures below 50 mK the relaxation of TSs is caused primarily by interactions between TSs.Comment: 4 pages, 4 figures, submitted to PR

3D integrated superconducting qubits

As the field of superconducting quantum computing advances from the few-qubit stage to larger-scale processors, qubit addressability and extensibility will necessitate the use of 3D integration and packaging. While 3D integration is well-developed for commercial electronics, relatively little work has been performed to determine its compatibility with high-coherence solid-state qubits. Of particular concern, qubit coherence times can be suppressed by the requisite processing steps and close proximity of another chip. In this work, we use a flip-chip process to bond a chip with superconducting flux qubits to another chip containing structures for qubit readout and control. We demonstrate that high qubit coherence ($T_1$, $T_{2,\rm{echo}} > 20\,\mu$s) is maintained in a flip-chip geometry in the presence of galvanic, capacitive, and inductive coupling between the chips

Structural and electronic properties of Pb1-xCdxTe and Pb1-xMnxTe ternary alloys

A systematic theoretical study of two PbTe-based ternary alloys, Pb1-xCdxTe and Pb1-xMnxTe, is reported. First, using ab initio methods we study the stability of the crystal structure of CdTe - PbTe solid solutions, to predict the composition for which rock-salt structure of PbTe changes into zinc-blende structure of CdTe. The dependence of the lattice parameter on Cd (Mn) content x in the mixed crystals is studied by the same methods. The obtained decrease of the lattice constant with x agrees with what is observed in both alloys. The band structures of PbTe-based ternary compounds are calculated within a tight-binding approach. To describe correctly the constituent materials new tight-binding parameterizations for PbTe and MnTe bulk crystals as well as a tight-binding description of rock-salt CdTe are proposed. For both studied ternary alloys, the calculated band gap in the L point increases with x, in qualitative agreement with photoluminescence measurements in the infrared. The results show also that in p-type Pb1-xCdxTe and Pb1-xMnxTe mixed crystals an enhancement of thermoelectrical power can be expected.Comment: 10 pages, 13 figures, submitted to Physical Review