A UIMA wrapper for the NCBO annotator

Summary: The Unstructured Information Management Architecture (UIMA) framework and web services are emerging as useful tools for integrating biomedical text mining tools. This note describes our work, which wraps the National Center for Biomedical Ontology (NCBO) Annotator—an ontology-based annotation service—to make it available as a component in UIMA workflows

Extreme alpha-clustering in the 18O nucleus

The structure of the 18O nucleus at excitation energies above the alpha decay threshold was studied using 14C+alpha resonance elastic scattering. A number of states with large alpha reduced widths have been observed, indicating that the alpha-cluster degree of freedom plays an important role in this N not equal Z nucleus. However, the alpha-cluster structure of this nucleus is very different from the relatively simple pattern of strong alpha-cluster quasi-rotational bands in the neighboring 16O and 20Ne nuclei. A 0+ state with an alpha reduced width exceeding the single particle limit was identified at an excitation energy of 9.9+/-0.3 MeV. We discuss evidence that states of this kind are common in light nuclei and give possible explanations of this feature.Comment: 4 pages, 2 figures, 1 table. Resubmission with minor changes for clarity, including removal of one figur

pp-sdsd shell gap reduction in neutron-rich systems and cross-shell excitations in 20^{20}O

Excited states in $^{20}$O were populated in the reaction $^{10}$Be($^{14}$C,$\alpha$) at Florida State University. Charged particles were detected with a particle telescope consisting of 4 annularly segmented Si surface barrier detectors and $\gamma$ radiation was detected with the FSU $\gamma$ detector array. Five new states were observed below 6 MeV from the $\alpha$-$\gamma$ and $\alpha$-$\gamma$-$\gamma$ coincidence data. Shell model calculations suggest that most of the newly observed states are core-excited 1p-1h excitations across the $N = Z = 8$ shell gap. Comparisons between experimental data and calculations for the neutron-rich O and F isotopes imply a steady reduction of the $p$-$sd$ shell gap as neutrons are added

Liana litter decomposes faster than tree litter in a multispecies and multisite experiment

1. Lianas account for a small fraction of forest biomass, but their contribution to leaf or litter biomass and thus to food webs can be substantial. Globally liana exhibit fast life-history traits. Thus, liana litter may decompose faster than tree litter, and could enhance the decomposition of tree litter (complementarity effect). The differences in decomposition may also vary with mesofauna access or across forest communities. The contribution of these factors to nutrient biogeochemical cycling is poorly understood. 2. We examined the decomposition of litter of 20 liana and 20 tree species of three different tropical forest communities in southern China, over 1 year. (i) We incubated the litter in bags with coarse and fine mesh to distinguish mesofaunal and microfaunal effects. (ii) We used single-species litter bags to compare decomposition rates of lianas and trees, to test which functional traits best explained decomposition, and whether those traits differed between lianas and trees, and among forest types. (iv) We used mixed-species litter bags to test whether liana litter enhances decomposition in litter mixtures. (v) We evaluated how leaf litter nutrients decayed in relation to litter mass. 3. Litter decayed faster in coarse-mesh than fine-mesh bags, but there was no interaction effect with forest type or growth form. Liana litter decayed faster than tree litter in single-species bags with mesofauna access and in mixed bags (liana-only mix, tree-only mix) without mesofauna. Lianas had higher nitrogen content and specific leaf area and lower leaf dry matter content (LDMC) and toughness than trees. Decomposition rate was significantly negatively related to LDMC. Litter of evergreen broadleaved forest decomposed slower than that of other forest types. Liana litter did not enhance the decomposition of tree litter in mixtures. Liana litter released calcium slightly faster than trees. 4. Synthesis: Leaf litter decomposes faster for lianas than trees, despite high variability of traits and decomposition rates within each growth form and overlap between growth forms, and we found no evidence for the complementarity hypothesis. Our study sheds light on the potential role of lianas within brown food webs and their importance on terrestrial biogeochemistry

Evolution of the E(1/21+)−E(3/21+)E(1/2^+_1)-E(3/2^+_1) energy spacing in odd-mass K, Cl and P isotopes for N=20−28N=20-28

The energy of the first excited state in the neutron-rich N=28 nucleus 45Cl has been established via in-beam gamma-ray spectroscopy following proton removal. This energy value completes the systematics of the E(1/2^+_1)-E(3/2^+_1) level spacing in odd-mass K, Cl and P isotopes for N=20-28. The results are discussed in the framework of shell-model calculations in the sd-fp model space. The contribution of the central, spin-orbit and tensor components is discussed from a calculation based on a proton single-hole spectrum from G-matrix and pi + rho meson exchange potentials. A composite model for the proton 0d_{3/2}-1s_{1/2} single-particle energy shift is presented.Comment: Phys. Rev. C, in pres

Population of bound excited states in intermediate-energy fragmentation reactions

Fragmentation reactions with intermediate-energy heavy-ion beams exhibit a wide range of reaction mechanisms, ranging from direct reactions to statistical processes. We examine this transition by measuring the relative population of excited states in several sd-shell nuclei produced by fragmentation with the number of removed nucleons ranging from two to sixteen. The two-nucleon removal is consistent with a non-dissipative process whereas the removal of more than five nucleons appears to be mainly statistical.Comment: 5 pages, 6 figure