103 research outputs found
Reconstruction of a first-order phase transition from computer simulations of individual phases and subphases
We present a new method for investigating first-order phase transitions using
Monte Carlo simulations. It relies on the multiple-histogram method and uses
solely histograms of individual phases. In addition, we extend the method to
include histograms of subphases. The free energy difference between phases,
necessary for attributing the correct statistical weights to the histograms, is
determined by a detour in control parameter space via auxiliary systems with
short relaxation times. We apply this method to a recently introduced model for
structure formation in polypeptides for which other methods fail.Comment: 13 pages in preprint mode, REVTeX, 2 Figures available from the
authors ([email protected], [email protected]
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Comparison of modeled snow properties in Afghanistan, Pakistan, and Tajikistan
Ice and snowmelt feed the Indus River and Amu Darya in western High Mountain Asia, yet there are limited in situ measurements of these resources. Previous work in the region has shown promise using snow water equivalent (SWE) reconstruction, which requires no in situ measurements, but validation has been a problem. However, recently we were provided with daily manual snow depth measurements from Afghanistan, Tajikistan, and Pakistan by the Aga Khan Agency for Habitat (AKAH). To validate SWE reconstruction, at each station, accumulated precipitation and SWE were derived from snow depth using the numerical snow cover model SNOWPACK. High-resolution (500 m) reconstructed SWE estimates from the Parallel Energy Balance Model (ParBal) were then compared to the modeled SWE at the stations. The Alpine3D model was then used to create spatial estimates at 25 km resolution to compare with estimates from other snow models. Additionally, the coupled SNOWPACK and Alpine3D system has the advantage of simulating snow profiles, which provides stability information. The median number of critical layers and percentage of faceted layers across all of the pixels containing the AKAH stations were computed. For SWE at the point scale, the reconstructed estimates showed a bias of −42 mm (−19 %) at peak SWE. For the coarser spatial SWE estimates, the various models showed a wide range, with reconstruction being on the lower end. A heavily faceted snowpack was observed in both years, but 2018, a dry year, according to most of the models, showed more critical layers that persisted for a longer period.
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Climate change impacts on maritime mountain snowpack in the Oregon Cascades
This study investigates the effect of projected temperature increases on maritime mountain snowpack in the McKenzie River Basin (MRB; 3041 km(2)) in the Cascades Mountains of Oregon, USA. We simulated the spatial distribution of snow water equivalent (SWE) in the MRB for the period of 1989-2009 with SnowModel, a spatially-distributed, process-based model (Liston and Elder, 2006b). Simulations were evaluated using point-based measurements of SWE, precipitation, and temperature that showed Nash-Sutcliffe Efficiency coefficients of 0.83, 0.97, and 0.80, respectively. Spatial accuracy was shown to be 82% using snow cover extent from the Landsat Thematic Mapper. The validated model then evaluated the inter-and intra-year sensitivity of basin wide snowpack to projected temperature increases (2 degrees C) and variability in precipitation (+/- 10 %). Results show that a 2 degrees C increase in temperature would shift the average date of peak snowpack 12 days earlier and decrease basin-wide volumetric snow water storage by 56 %. Snowpack between the elevations of 1000 and 2000m is the most sensitive to increases in temperature. Upper elevations were also affected, but to a lesser degree. Temperature increases are the primary driver of diminished snowpack accumulation, however variability in precipitation produce discernible changes in the timing and volumetric storage of snowpack. The results of this study are regionally relevant as melt water from the MRB's snowpack provides critical water supply for agriculture, ecosystems, and municipalities throughout the region especially in summer when water demand is high. While this research focused on one watershed, it serves as a case study examining the effects of climate change on maritime snow, which comprises 10% of the Earth's seasonal snow cover.Keywords: Hydrology,
Model,
Energy balance,
Pacific Northwest,
United States,
Snowmelt runoff,
Cover,
System,
Western North America,
water resource
In vivo comparison of arterial lumen dimensions assessed by co-registered three-dimensional (3D) quantitative coronary angiography, intravascular ultrasound and optical coherence tomography
This study sought to compare lumen dimensions as assessed by 3D quantitative coronary angiography (QCA) and by intravascular ultrasound (IVUS) or optical coherence tomography (OCT), and to assess the association of the discrepancy with vessel curvature. Coronary lumen dimensions often show discrepancies when assessed by X-ray angiography and by IVUS or OCT. One source of error concerns a possible mismatch in the selection of corresponding regions for the comparison. Therefore, we developed a novel, real-time co-registration approach to guarantee the point-to-point correspondence between the X-ray, IVUS and OCT images. A total of 74 patients with indication for cardiac catheterization were retrospectively included. Lumen morphometry was performed by 3D QCA and IVUS or OCT. For quantitative analysis, a novel, dedicated approach for co-registration and lumen detection was employed allowing for assessment of lumen size at multiple positions along the vessel. Vessel curvature was automatically calculated from the 3D arterial vessel centerline. Comparison of 3D QCA and IVUS was performed in 519 distinct positions in 40 vessels. Correlations were r = 0.761, r = 0.790, and r = 0.799 for short diameter (SD), long diameter (LD), and area, respectively. Lumen sizes were larger by IVUS (P < 0.001): SD, 2.51 ± 0.58 mm versus 2.34 ± 0.56 mm; LD, 3.02 ± 0.62 mm versus 2.63 ± 0.58 mm; Area, 6.29 ± 2.77 mm2versus 5.08 ± 2.34 mm2. Comparison of 3D QCA and OCT was performed in 541 distinct positions in 40 vessels. Correlations were r = 0.880, r = 0.881, and r = 0.897 for SD, LD, and area, respectively. Lumen sizes were larger by OCT (P < 0.001): SD, 2.70 ± 0.65 mm versus 2.57 ± 0.61 mm; LD, 3.11 ± 0.72 mm versus 2.80 ± 0.62 mm; Area 7.01 ± 3.28 mm2versus 5.93 ± 2.66 mm2. The vessel-based discrepancy between 3D QCA and IVUS or OCT long diameters increased with increasing vessel curvature. In conclusion, our comparison of co-registered 3D QCA and invasive imaging data suggests a bias towards larger lume
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Global snow mass measurements and the effect of stratigraphic detail on inversion of microwave brightness temperatures
Snow provides large seasonal storage of freshwater, and information about the distribution of snow mass as Snow Water Equivalent (SWE) is important for hydrological planning and detecting climate change impacts. Large regional disagreements remain between estimates from reanalyses, remote sensing and modelling. Assimilating passive microwave information improves SWE estimates in many regions but the assimilation must account for how microwave scattering depends on snow stratigraphy. Physical snow models can estimate snow stratigraphy, but users must consider the computational expense of model complexity versus acceptable errors. Using data from the National Aeronautics and Space Administration Cold Land Processes Experiment (NASA CLPX) and the Helsinki University of Technology (HUT) microwave emission model of layered snowpacks, it is shown that simulations of the brightness temperature difference between 19 GHz and 37 GHz vertically polarised microwaves are consistent with Advanced Microwave Scanning Radiometer-Earth Observing System (AMSR-E) and Special Sensor Microwave Imager (SSM/I) retrievals once known stratigraphic information is used. Simulated brightness temperature differences for an individual snow profile depend on the provided stratigraphic detail. Relative to a profile defined at the 10 cm resolution of density and temperature measurements, the error introduced by simplification to a single layer of average properties increases approximately linearly with snow mass. If this brightness temperature error is converted into SWE using a traditional retrieval method then it is equivalent to ±13 mm SWE (7% of total) at a depth of 100 cm. This error is reduced to ±5.6 mm SWE (3 % of total) for a two-layer model
Predictors of pain intensity and persistence in a prospective Italian cohort of patients with herpes zoster: relevance of smoking, trauma and antiviral therapy
Herpes zoster (HZ) is a common disease, characterized by rash-associated localized pain. Its main complication, post-herpetic neuralgia (PHN), is difficult to treat and may last for months to years in the wake of rash resolution. Uncertainties remain as to the knowledge of predictors of HZ-related pain, including the role of antiviral therapy in preventing PHN in ordinary clinical practice. This prospective cohort study was aimed at investigating pain intensity at HZ presentation and its correlates, as well as the incidence of PHN and its predictors
ADAM8/MS2/CD156a: a metalloprotease-disintegrin involved in immune responses
From all ADAM family members known, interesting features of some members of this the family are is their distinct expression patterns. ADAM8 is such an example, as it was identified originally in monocytes and is expressed in many specialised cell types, among them macrophages, B-cells, granulocytes, follicle cells, glandular epithelial cells, osteoclasts, oligodendrocytes, microglia, neurons and astrocytes. ADAM8 is activated by autocatalytic prodomain removal and the substrates like the Close Homologue of L1 (CHL1) and CD23 identified so far are either involved in cell adhesion or immune responses. In turn, ADAM8 expression in some cell types such as macrophages, astrocytes and microglia is regulated by inflammatory mediators including tumor necrosis factor-α, lipopolysaccharides (LPS) and prostaglandins. Whereas embryonal development in ADAM8 deficient mice appears normal, its upregulation under inflammatory conditions like that seen in chronic neurodegeneration, after administration of LPS and in allergic asthma, seems to reflect a specific function of ADAM8 in cytokine response. From recent experiments it can be concluded that the ADAM8 induction by inflammatory cytokines serves protective functions, e.g. by shedding of receptors mediating inflammatory responses or by degrading immune mediators directly
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