Liquid repellent surfaces

The work in this thesis is primarily aimed at supporting the NBe (Nuclear, Biological and Chemical) aspect of Crusader 21, the military clothing programme for the early 21st Century. This aims to produce a multi-purpose, systems-orientated combat ensemble for the UK Armed Services. Conventional "wet" techniques for chemically modifying fabrics have certain disadvantages, however employing plasma technology may provide a route for many novel "multi-functional effects" fabrics such as repellency against toxic chemical agents. In order to produce repellent coatings the surface must have a low surface energy. To obtain this, inert chemical groups need to be attached to the solid substrate. In addition to chemistry, surface roughness plays an important role in repellency. Liquid repellent surfaces have been produced by the pulsed plasma polymerisation of I H, 1 H,2H,2H -heptadecafluorodecyl acrylate. These films have chemical functionalities indicative of polymerisation occurring through the acrylate double bond, as shown by Infrared Spectroscopy analysis. Structural retention was optimised using experimental design techniques and resulted in a critical surface tension of wetting as low as 4.3 mN m-I (c.f. Teflon 18.5 mN m-I). Plasma deposition of a functionalised surface followed by reaction with a fluorinated alcohol proved less affective. Enhanced deposition rates for 1 H, 1 H,2H-perfluorododec-I-ene, over the saturated analogue, have indicated that polymerisation can occur during the off-time of the pulsed plasma period, via free radical polymerisation pathways. X-ray Photoelectron Spectroscopy (XPS) has indicated greater structural group retention for monomers containing double bonds. In order to obtain super liquid repellency the effect of surface roughness was investigated, where both commercially available rough surfaces and plasma roughened substrates were utilised. Once optimised, the rough surfaces were coated with 1 H, 1 H,2H,2H-heptadecafluorodecyl acrylate and produced super repellent films

A thematic analysis of messages posted by moderators within health-related asynchronous online support forums

Objective: To identify and describe the activities performed by online support community moderators. Methods: A total of 790 messages were downloaded for analysis. Messages were written by 59 moderators from 6 forums that represent a diverse range of conditions (arthritis, complex regional pain syndrome, Crohn’s disease, depression, diabetes and Huntington’s disease). Results:Thematic analysis revealed four themes: supportive tasks supportive tasks involve providing help to members, moderators sharing experiences shows how they use forums to fulfil their own personal support needs, making announcements about new discoveries and upcoming events, and administrative tasks such as enforcing rules and deleting spam. Conclusion: These results are consistent with the helper-therapy principle and provide a new insight into the diverse and varied range of activities carried out by moderators. Practice implications: Moderators perform many roles, including using forums for their own support needs

Genetic testing for Huntington’s disease: A thematic analysis of online support community messages

Huntington’s disease is a fatal late-onset genetic illness that causes motor, cognitive and psychiatric disorders. Individuals considering genetic testing may benefit from online social support. This study investigates how genetic testing is discussed within health forums. 337 messages written by 58 individuals were analysed using deductive thematic analysis. Discussions examined three themes: deciding to be tested (enquiring about symptoms, starting a new family), preparing for the test (information seeking, attending appointments), and receiving the results (positive results, negative results). Forums can reduce the uncertainty of ambiguous symptoms, and provide ongoing personalized support before, during and after a genetic test

Optimizing Laboratory Pyrolysis Methods to Compliment Real World Fire Debris

Forensic analysts are tasked with determining the presence of ignitable liquid residue in fire debris. Analysis of fire debris allows the analyst to understand how the fire occurred. However, the presence of some substrates can potentially impact the identification of ignitable liquid residue and classification of a sample as positive or negative for the presence of ignitable liquid. Pyrolysis of building materials and furnishings (substrates) lead to background interference within the resulting chromatographic profile. To combat misclassification of a sample as positive for ignitable liquid residue, knowledge of the pyrolysis products from individual substrates is of utmost importance. However, unburned reference samples from a fire scene can be difficult to obtain. The use of a database in conjunction with the analysis of the samples can lead to a more complete analysis of fire debris. Within this research, four different burn methods (modified destruction distillation method, top heat, bottom heat, and tube furnace) were utilized in burning eight different flooring substrates (polyester, nylon, and olefin carpeting, carpet padding, vinyl flooring, laminate flooring, yellow pine, and plywood) to obtain pyrolysis/combustion product profiles. Each burn method was performed at three different burn times for a total of twelve different burns of each substrate. Standard methods, ASTM E1412-12 and ASTM E1618-14, were used in the extraction and interpretation of the laboratory burn products. Principal component analysis (PCA) was used to relate the laboratory burn results to neat ignitable liquid/substrate and large scale burn data sets. Laboratory burn data projected into the PCA space displayed that the laboratory burn data is similar to the data contained within the ILRC and Substrate databases. Differences observed within laboratory burn data projections illustrated the variability of the laboratory burn methods. The composition of the substrate dictated the pyrolysis/combustion products produced. While this research only focuses on flooring substrates, an increase in the number of different types of materials in the Substrate Database can aid analysts in identifying common pyrolysis/combustion products observed in fire debris

An automated graphics tool for comparative genomics: the Coulson plot generator.

BACKGROUND: Comparative analysis is an essential component to biology. When applied to genomics for example, analysis may require comparisons between the predicted presence and absence of genes in a group of genomes under consideration. Frequently, genes can be grouped into small categories based on functional criteria, for example membership of a multimeric complex, participation in a metabolic or signaling pathway or shared sequence features and/or paralogy. These patterns of retention and loss are highly informative for the prediction of function, and hence possible biological context, and can provide great insights into the evolutionary history of cellular functions. However, representation of such information in a standard spreadsheet is a poor visual means from which to extract patterns within a dataset. RESULTS: We devised the Coulson Plot, a new graphical representation that exploits a matrix of pie charts to display comparative genomics data. Each pie is used to describe a complex or process from a separate taxon, and is divided into sectors corresponding to the number of proteins (subunits) in a complex/process. The predicted presence or absence of proteins in each complex are delineated by occupancy of a given sector; this format is visually highly accessible and makes pattern recognition rapid and reliable. A key to the identity of each subunit, plus hierarchical naming of taxa and coloring are included. A java-based application, the Coulson plot generator (CPG) automates graphic production, with a tab or comma-delineated text file as input and generating an editable portable document format or svg file. CONCLUSIONS: CPG software may be used to rapidly convert spreadsheet data to a graphical matrix pie chart format. The representation essentially retains all of the information from the spreadsheet but presents a graphically rich format making comparisons and identification of patterns significantly clearer. While the Coulson plot format is highly useful in comparative genomics, its original purpose, the software can be used to visualize any dataset where entity occupancy is compared between different classes. AVAILABILITY: CPG software is available at sourceforge http://sourceforge.net/projects/coulson and http://dl.dropbox.com/u/6701906/Web/Sites/Labsite/CPG.html.RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/about/license which is similar to the 'Creative Commons Attribution Licence'. In brief you may : copy, distribute, and display the work; make derivative works; or make commercial use of the work - under the following conditions: the original author must be given credit; for any reuse or distribution, it must be made clear to others what the license terms of this work are

Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum.

RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/about/license which is similar to the 'Creative Commons Attribution Licence'. In brief you may : copy, distribute, and display the work; make derivative works; or make commercial use of the work - under the following conditions: the original author must be given credit; for any reuse or distribution, it must be made clear to others what the license terms of this work are.BACKGROUND: Genes for the production of a broad range of fungal secondary metabolites are frequently colinear. The prevalence of such gene clusters was systematically examined across the genome of the cereal pathogen Fusarium graminearum. The topological structure of transcriptional networks was also examined to investigate control mechanisms for mycotoxin biosynthesis and other processes. RESULTS: The genes associated with transcriptional processes were identified, and the genomic location of transcription-associated proteins (TAPs) analyzed in conjunction with the locations of genes exhibiting similar expression patterns. Highly conserved TAPs reside in regions of chromosomes with very low or no recombination, contrasting with putative regulator genes. Co-expression group profiles were used to define positionally clustered genes and a number of members of these clusters encode proteins participating in secondary metabolism. Gene expression profiles suggest there is an abundance of condition-specific transcriptional regulation. Analysis of the promoter regions of co-expressed genes showed enrichment for conserved DNA-sequence motifs. Potential global transcription factors recognising these motifs contain distinct sets of DNA-binding domains (DBDs) from those present in local regulators. CONCLUSIONS: Proteins associated with basal transcriptional functions are encoded by genes enriched in regions of the genome with low recombination. Systematic searches revealed dispersed and compact clusters of co-expressed genes, often containing a transcription factor, and typically containing genes involved in biosynthetic pathways. Transcriptional networks exhibit a layered structure in which the position in the hierarchy of a regulator is closely linked to the DBD structural class

The Red-Cockaded Woodpecker\u27s Role in the Southern Pine Ecosystem, Population Trends and Relationships with Southern Pine Beetles

This study reviews the overall ecological role of the Red-cockaded Woodpecker (Picoides borealis)in the southern pine ecosystem. It is the only North American woodpecker species to become well adapted to a landscape that was relatively devoid of the substrate typically used by woodpeckers for cavity excavation (i.e. snags and decayed, living hardwoods). Its adaptation to use living pines for cavity excavation has expanded the use of this fire-disclimax ecosystem for numerous other cavity-using species. As such, the Red-cockaded Woodpecker represents an important keystone species of fire-disclimax pine ecosystems of the South. Historically, populations of this woodpecker and other cavity dependent species decreased dramatically with the logging of the southern pine forests between 1870 and 1930. Woodpecker populations continued to decline into the 1980s as a result of inadequate old-growth pine habitat, and suppression of fire which permitted encroachment of hardwoods into the previously pine-dominated ecosystem. Management practices initiated after 1988 have resulted in woodpecker population increases on Texas national forests. Cavity-tree mortality and southern pine beetle (Dendrocconus frontalis) infestation of cavity trees on the Angelina National Forest in eastern Texas were studied from 1983 through 1996. The intensive management activities initiated to stabilize severely declining woodpecker populations in 1989 may have increased beetle infestation rates of cavity trees in loblolly (Pinus taeda) and shortleaf (Pinus echinata) pine habitat resulting in a net loss of cavity trees over the past seven years. Initial results suggest that beetle-caused mortality of cavity trees may be related in part to ambient southern pine beetle population levels in surrounding forest stands