Analysis of Immunoglobulin Transcripts in the Ostrich Struthio camelus, a Primitive Avian Species

Previous studies on the immunoglobulin (Ig) genes in avian species are limited (mainly to galliformes and anseriformes) but have revealed several interesting features, including the absence of the IgD and Igκ encoding genes, inversion of the IgA encoding gene and the use of gene conversion as the primary mechanism to generate an antibody repertoire. To better understand the Ig genes and their evolutionary development in birds, we analyzed the Ig genes in the ostrich (Struthio camelus), which is one of the most primitive birds. Similar to the chicken and duck, the ostrich expressed only three IgH chain isotypes (IgM, IgA and IgY) and λ light chains. The IgM and IgY constant domains are similar to their counterparts described in other vertebrates. Although conventional IgM, IgA and IgY cDNAs were identified in the ostrich, we also detected a transcript encoding a short membrane-bound form of IgA (lacking the last two CH exons) that was undetectable at the protein level. No IgD or κ encoding genes were identified. The presence of a single leader peptide in the expressed heavy chain and light chain V regions indicates that gene conversion also plays a major role in the generation of antibody diversity in the ostrich. Because the ostrich is one of the most primitive living aves, this study suggests that the distinct features of the bird Ig genes appeared very early during the divergence of the avian species and are thus shared by most, if not all, avian species

Establishing the carrier scattering phase diagram for ZrNiSn-based half-Heusler thermoelectric materials

Chemical doping is one of the most important strategies for tuning electrical properties of semiconductors, particularly thermoelectric materials. Generally, the main role of chemical doping lies in optimizing the carrier concentration, but there can potentially be other important effects. Here, we show that chemical doping plays multiple roles for both electron and phonon transport properties in half-Heusler thermoelectric materials. With ZrNiSn-based half-Heusler materials as an example, we use high-quality single and polycrystalline crystals, various probes, including electrical transport measurements, inelastic neutron scattering measurement, and first-principles calculations, to investigate the underlying electron-phonon interaction. We find that chemical doping brings strong screening effects to ionized impurities, grain boundary, and polar optical phonon scattering, but has negligible influence on lattice thermal conductivity. Furthermore, it is possible to establish a carrier scattering phase diagram, which can be used to select reasonable strategies for optimization of the thermoelectric performance.Comment: 21 pages, 5 figure

A medium-entropy transition metal oxide cathode for high-capacity lithium metal batteries

The limited capacity of the positive electrode active material in non-aqueous rechargeable lithium-based batteries acts as a stumbling block for developing high-energy storage devices. Although lithium transition metal oxides are high-capacity electrochemical active materials, the structural instability at high cell voltages (e.g., >4.3 V) detrimentally affects the battery performance. Here, to circumvent this issue, we propose a Li1.46Ni0.32Mn1.2O4-x (0 < x < 4) material capable of forming a medium-entropy state spinel phase with partial cation disordering after initial delithiation. Via physicochemical measurements and theoretical calculations, we demonstrate the structural disorder in delithiated Li1.46Ni0.32Mn1.2O4-x, the direct shuttling of Li ions from octahedral sites to the spinel structure and the charge-compensation Mn3+/Mn4+ cationic redox mechanism after the initial delithiation. When tested in a coin cell configuration in combination with a Li metal anode and a LiPF6-based non-aqueous electrolyte, the Li1.46Ni0.32Mn1.2O4-x-based positive electrode enables a discharge capacity of 314.1 mA h g−1 at 100 mA g−1 with an average cell discharge voltage of about 3.2 V at 25 ± 5 °C, which results in a calculated initial specific energy of 999.3 Wh kg−1 (based on mass of positive electrode’s active material)

Spin-orbit-coupled triangular-lattice spin liquid in rare-earth chalcogenides

Spin-orbit coupling is an important ingredient in many spin liquid candidate materials, especially among the rare-earth magnets and Kitaev materials. We explore the rare-earth chalcogenides NaYbS$_2$ where the Yb$^{3+}$ ions form a perfect triangular lattice. Unlike its isostructural counterpart YbMgGaO$_4$ and the kagom\'{e} lattice herbertsmithite, this material does not have any site disorders both in magnetic and non-magnetic sites. We carried out the thermodynamic and inelastic neutron scattering measurements. The magnetic dynamics could be observed with a broad gapless excitation band up to 1.0 meV at 50 mK and 0 T, no static long-range magnetic ordering is detected down to 50 mK. We discuss the possibility of Dirac spin liquid for NaYbS$_2$. We identify the experimental signatures of field-induced transitions from the disordered spin liquid to an ordered antiferromagnet with an excitation gap at finite magnetic fields and discuss this result with our Monte Carlo calculation of the proposed spin model. Our findings could inspire further interests in the spin-orbit-coupled spin liquids and the magnetic ordering transition from them

Immunoglobulin Genomics in the Guinea Pig (Cavia porcellus)

In science, the guinea pig is known as one of the gold standards for modeling human disease. It is especially important as a molecular and cellular biology model for studying the human immune system, as its immunological genes are more similar to human genes than are those of mice. The utility of the guinea pig as a model organism can be further enhanced by further characterization of the genes encoding components of the immune system. Here, we report the genomic organization of the guinea pig immunoglobulin (Ig) heavy and light chain genes. The guinea pig IgH locus is located in genomic scaffolds 54 and 75, and spans approximately 6,480 kb. 507 VH segments (94 potentially functional genes and 413 pseudogenes), 41 DH segments, six JH segments, four constant region genes (μ, γ, ε, and α), and one reverse δ remnant fragment were identified within the two scaffolds. Many VH pseudogenes were found within the guinea pig, and likely constituted a potential donor pool for gene conversion during evolution. The Igκ locus mapped to a 4,029 kb region of scaffold 37 and 24 is composed of 349 Vκ (111 potentially functional genes and 238 pseudogenes), three Jκ and one Cκ genes. The Igλ locus spans 1,642 kb in scaffold 4 and consists of 142 Vλ (58 potentially functional genes and 84 pseudogenes) and 11 Jλ -Cλ clusters. Phylogenetic analysis suggested the guinea pig’s large germline VH gene segments appear to form limited gene families. Therefore, this species may generate antibody diversity via a gene conversion-like mechanism associated with its pseudogene reserves