On the Putative Detection of z>0 X-ray Absorption Features in the Spectrum of Markarian 421

In a series of papers, Nicastro et al. have reported the detection of z>0 OVII absorption features in the spectrum of Mrk421 obtained with the Chandra Low Energy Transmission Grating Spectrometer (LETGS). We evaluate this result in the context of a high quality spectrum of the same source obtained with the Reflection Grating Spectrometer (RGS) on XMM-Newton. The data comprise over 955ks of usable exposure time and more than 26000 counts per 50 milliAngstrom at 21.6 Angstroms. We concentrate on the spectrally clean region (21.3 < lambda < 22.5 Angstroms) where sharp features due to the astrophysically abundant OVII may reveal an intervening, warm--hot intergalactic medium (WHIM). We do not confirm detection of any of the intervening systems claimed to date. Rather, we detect only three unsurprising, astrophysically expected features down to the Log(N_i)~14.6 (3 sigma) sensitivity level. Each of the two purported WHIM features is rejected with a statistical confidence that exceeds that reported for its initial detection. While we can not rule out the existence of fainter, WHIM related features in these spectra, we suggest that previous discovery claims were premature. A more recent paper by Williams et al. claims to have demonstrated that the RGS data we analyze here do not have the resolution or statistical quality required to confirm or deny the LETGS detections. We show that our careful analysis resolves the issues encountered by Williams et al. and recovers the full resolution and statistical quality of the RGS data. We highlight the differences between our analysis and those published by Williams et al. as this may explain our disparate conclusions.Comment: 19 pages/7 figures/4 tables. 060424 submitted to ApJ 060522 re-submitted following ApJ reques

Middle Ordovician carbonate facies development, conodont biostratigraphy and faunal diversity patterns at the Lynna River, northwestern Russia

The Ordovician Period has emerged as a highly dynamic time in Earth history. Comprehensive work on chrono, chemo-and biostratigraphy has resulted in an overall wellconstrained systemic framework, but several local successions around the globe still await detailed analysis in many respects. Herein we perform a highresolution analysis of abiotic and biotic signals in the Lynna River section, a key locality in northwestern Russia. As this section has been pivotal in documenting the temporal evolution of the Great Ordovician Biodiversification Event on Baltica, the macroscopic and microscopic characteristics of the local succession reveal important paleoenvironmental information that ties into the global development during the Middle Ordovician. The results add particularly to the understanding of the characteristics and largescale sedimentary ‘behavior’ of the Baltoscandian paleobasin. Microfacies vary consistently with the macroscopic appearance of the rocks, with intervals characterized by competent limestone being associated with coarser carbonate textures and intervals dominated by marly beds associated with finer textures. Along with carbonate textures, fossil grain assemblages vary in a rhythmic (~cyclic) manner. The local rocks are commonly partly dolomitized, with the proportion of dolomitization increasing upsection. Regional comparisons suggest that the changes in overall macro and microfacies were strongly related to variations in sea level. New highresolution conodont biostratigraphic data largely confirm previous regional correlations based on lithostratigraphy and trilobite faunas, and enable more robust correlations worldwide

Lactadherin Inhibits Secretory Phospholipase A2 Activity on Pre-Apoptotic Leukemia Cells

Secretory phospholipase A2 (sPLA2) is a critical component of insect and snake venoms and is secreted by mammalian leukocytes during inflammation. Elevated secretory PLA2 concentrations are associated with autoimmune diseases and septic shock. Many sPLA2’s do not bind to plasma membranes of quiescent cells but bind and digest phospholipids on the membranes of stimulated or apoptotic cells. The capacity of these phospholipases to digest membranes of stimulated or apoptotic cells correlates to the exposure of phosphatidylserine. In the present study, the ability of the phosphatidyl-L-serine-binding protein, lactadherin to inhibit phospholipase enzyme activity has been assessed. Inhibition of human secretory phospholipase A2-V on phospholipid vesicles exceeded 90%, whereas inhibition of Naja mossambica sPLA2 plateaued at 50–60%. Lactadherin inhibited 45% of activity of Naja mossambica sPLA2 and >70% of human secretory phospholipase A2-V on the membranes of human NB4 leukemia cells treated with calcium ionophore A23187. The data indicate that lactadherin may decrease inflammation by inhibiting sPLA2

A revised lithostratigraphy for the Palaeogene – lower Neogene of the Danish North Sea

Intense drilling activity following the discovery of the Siri Field in 1995 has resulted in an improved understanding of the siliciclastic Palaeogene succession in the Danish North Sea sector (Fig. 1). Many of the new wells were drilled in the search for oil reservoirs in sand bodies of Paleocene–Eocene age. The existing lithostratigraphy was based on data from a generation of wells that were drilled with deeper stratigraphic targets, with little or no interest in the overlying Palaeogene sediments, and thus did not adequately consider the significance of the Palaeogene sandstone units in the Danish sector. In order to improve the understanding of the distribution, morphology and age of the Palaeogene sediments, in particular the economically important sandstone bodies, a detailed study of this succession in the Danish North Sea has recently been undertaken. An important aim of the project was to update the lithostratigraphic framework on the basis of the new data. The project was carried out at the Geological Survey of Denmark and Greenland (GEUS) with participants from the University of Aarhus, DONG E&amp;P and Statoil Norway, and was supported by the Danish Energy Agency. Most scientific results cannot be released until September 2006, but a revised lithostratigraphic scheme may be published prior to that date. Formal definition of new units and revision of the lithostratigraphy are in preparation. All of the widespread Palaeogene mudstone units in the North Sea have previously been formally established in Norwegian or British wells, and no reference sections exist in the Danish sector. As the lithology of a stratigraphic unit may vary slightly from one area to another, Danish reference wells have been identified during the present project, and the lithological descriptions of the formations have been expanded to include the appearance of the units in the Danish sector. Many of the sandstone bodies recently discovered in the Danish sector have a limited spatial distribution and were sourced from other areas than their contemporaneous counterparts in the Norwegian and British sectors. These sandstone bodies are therefore defined as new lithostratigraphic units in the Danish sector, and are assigned Danish type and reference sections. There is a high degree of lithological similarity between the Palaeogene–Neogene mudstone succession from Danish offshore boreholes and that from onshore exposures and boreholes, and some of the mudstone units indeed seem identical. However, in order to acknowledge the traditional distinction between offshore and onshore stratigraphic nomenclature, the two sets of nomenclature are kept separate herein. In recent years oil companies operating in the North Sea have developed various in-house lithostratigraphic charts for the Paleocene–Eocene sand and mudstone successions in the Danish and Norwegian sectors. A number of informal lithostratigraphic units have been adopted and widely used. In the present project, these units have been formally defined and described, maintaining their original names whenever feasible, with the aim of providing an unequivocal nomenclature for the Palaeogene – lower Neogene succession in the Danish sector. It has not been the intention to establish a sequence stratigraphic model for this succession in the North Sea; the reader is referred to the comprehensive works of Michelsen (1993), Neal et al. (1994), Mudge &amp; Bujak (1994, 1996a, b), Michelsen et al. (1995, 1998), Danielsen et al. (1997) and Rasmussen (2004)

The Sirius Passet Lagerstätte of North Greenland—A geochemical window on early Cambrian low‐oxygen environments and ecosystems

The early Cambrian Sirius Passet fauna of northernmost Greenland (Cambrian Series 2, Stage 3) contains exceptionally preserved soft tissues that provide an important window to early animal evolution, while the surrounding sediment holds critical data on the palaeodepositional water‐column chemistry. The present study combines palaeontological data with a multiproxy geochemical approach based on samples collected in situ at high stratigraphic resolution from Sirius Passet. After careful consideration of chemical alterations during burial, our results demonstrate that fossil preservation and biodiversity show significant correlation with iron enrichments (FeHR/FeT), trace metal behaviour (V/Al), and changes in nitrogen cycling (δ15N). These data, together with Mo/Al and the preservation of organic carbon (TOC), are consistent with a water column that was transiently low in oxygen concentration, or even intermittently anoxic. When compared with the biogeochemical characteristics of modern oxygen minimum zones (OMZs), geochemical and palaeontological data collectively suggest that oxygen concentrations as low as 0.2–0.4 ml/L restricted bioturbation but not the development of a largely nektobenthic community of predators and scavengers. We envisage for the Sirius Passet biota a depositional setting where anoxic water column conditions developed and passed over the depositional site, possibly in association with sea‐level change, and where this early Cambrian biota was established in conditions with very low oxygen

Stratigraphy and palaeoceanography of upper Maastrichtian chalks, southern Danish Central Graben

Upper Maastrichtian chalks form important hydrocarbon reservoirs in the Danish sector of the North Sea and have been intensively studied, yet their lithological uniformity can frustrate attempts to develop a high-resolution stratigraphic subdivision and a genetic understanding of the factors controlling production and sedimentation of the pelagic carbonate ooze. Recent research into these topics, supported by the Danish Energy Authority, was carried out by the Geological Survey of Denmark and Greenland (GEUS) in collaboration with the Geological Institute, University of Copenhagen by means of a multidisciplinary study involvingquantitative/semiquantitative palynology, micropalaeontology (nannofossils, foraminifers) and isotope geochemistry, integrated with detailed sedimentology. Two key wells were selected, the M-10X well from the Dan Field and the E-5X well from the Tyra SE Field (Fig. 1), based on the extensive core coverage in these wells and on their position in the southern part of the Danish Central Graben where evidence of large-scale resedimentation (and consequent stratigraphic complexity) is uncommon within the Maastrichtian section. In focusing on such a pelagic carbonate system, the ultimate aim is a holistic understanding of the marine system including temperature variation, nutrient supply and distribution, salinity, watermass layering, circulation and oxygen distribution. All these factors influence organic productivity and thus the accumulation of biogenic sediment. This study concentrated on a number of palaeoceanographic signals that can be derived from the sedimentary record, summarised in Fig. 2. Planktonic organisms, both phytoplankton (e.g. coccolithophores, some dinoflagellates) and zooplankton (e.g. foraminifers) provide a record of conditions in the upper water masses, largely within the photic zone, while bottom conditions are indicated by epifaunal/infaunal organisms (e.g. benthic foraminifers) and bioturbation, and by the sedimentological evidence of depositional processes at the sea floor. On a larger scale, the input of terrestrial organic material relative to the marine component can provide an indirect measure of shoreline migration and thus relative sea-level change, a factor that is also reflected in the δ13C isotopic composition of the seawater, as recorded by the biogenic carbonate ooze

Co-diversification of an intestinal Mycoplasma and its salmonid host

Understanding the evolutionary relationships between a host and its intestinal resident bacteria can transform how we understand adaptive phenotypic traits. The interplay between hosts and their resident bacteria inevitably affects the intestinal environment and, thereby, the living conditions of both the host and the microbiota. Thereby this co-existence likely influences the fitness of both bacteria and host. Whether this co-existence leads to evolutionary co-diversification in animals is largely unexplored, mainly due to the complexity of the environment and microbial communities and the often low host selection. We present the gut metagenome from wild Atlantic salmon (Salmo salar), a new wild organism model with an intestinal microbiota of low complexity and a well-described population structure, making it well-suited for investigating co-evolution. Our data reveal a strong host selection of a core gut microbiota dominated by a single Mycoplasma species. We found a clear co-diversification between the population structure of Atlantic salmon and nucleotide variability of the intestinal Mycoplasma populations conforming to expectations from co-evolution between host and resident bacteria. Our results show that the stable microbiota of Atlantic salmon has evolved with its salmonid host populations while potentially providing adaptive traits to the salmon host populations, including defence mechanisms, biosynthesis of essential amino acids, and metabolism of B vitamins. We highlight Atlantic salmon as a novel model for studying co-evolution between vertebrate hosts and their resident bacteria.publishedVersio