Cell wall remodeling in mycorrhizal symbiosis: a way towards biotrophism

Cell walls are deeply involved in the molecular talk between partners during plant and microbe interactions, and their role in mycorrhizae, i.e., the widespread symbiotic associations established between plant roots and soil fungi, has been investigated extensively. All mycorrhizal interactions achieve full symbiotic functionality through the development of an extensive contact surface between the plant and fungal cells, where signals and nutrients are exchanged. The exchange of molecules between the fungal and the plant cytoplasm takes place both through their plasma membranes and their cell walls; a functional compartment, known as the symbiotic interface, is thus defined. Among all the symbiotic interfaces, the complex intracellular interface of arbuscular mycorrhizal (AM) symbiosis has received a great deal of attention since its first description. Here, in fact, the host plasmamembrane invaginates and proliferates around all the developing intracellular fungal structures, and cell wall material is laid down between this membrane and the fungal cell surface. By contrast, in ectomycorrhizae (ECM), where the fungus grows outside and between the root cells, plant and fungal cell walls are always in direct contact and form the interface between the two partners. The organization and composition of cell walls within the interface compartment is a topic that has attracted widespread attention, both in ecto- and endomycorrhizae. The aim of this review is to provide a general overview of the current knowledge on this topic by integrating morphological observations, which have illustrated cell wall features during mycorrhizal interactions, with the current data produced by genomic and transcriptomic approaches

Symbiotic Proteomics — State of the Art in Plant–Mycorrhizal Fungi Interactions

Mycorrhizae are symbiotic associations between soil fungi belonging to diverse taxa and the roots of about 90% of all terrestrial plant species. The mutualistic nature of these symbioses is based on the nutritional exchanges between the partners. However, the benefits to the plant partner are not limited to an improved mineral nutrition because they also include a general increase in stress tolerance and health. Because of these benefits, mycorrhizae are of great interest in sustainable agriculture and forestry. In the past few years, the development of high-throughput molecular tools, in addition to the advancements in microscopy techniques, has allowed us to gain a deeper insight on the molecular mechanisms underlying the establishment and functioning of these symbioses. In this chapter, we focus on the use of proteomic tools to better understand the molecular bases of cell communication and the regulation of developmental and metabolic pathways in mycorrhizal associations

Italian reference rivers under the Water Framework Directive umbrella: do natural factors actually depict the observed nutrient conditions?

Abstract Background Despite the efforts made in the last century to counteract the nutrient enrichment from diffuse and point-sources, the excess of nitrogen and phosphorous is among the main causes of degradation of European rivers. In this context, determining natural background concentrations of nutrients in rivers is crucial for a correct definition of their ecological status. In the most anthropized regions, this is a difficult task. This study provides a nation-wide assessment of the nutrient concentration variability between Italian river reference sites. Results We applied the Affinity Propagation technique to identify groups of river sites classified as reference based on measured nutrients and oxygen water saturation. The role of natural and anthropogenic factors determining differences in nutrients concentration between groups of sites was explored. Nitrate concentrations varied from 0.01 mg N l−1 to more than 5 mg N l−1. Ammonia and total phosphorous varied between 0.001 and 0.12 mg l−1. Observed nutrient levels, although in line with those identified for reference sites in other countries, largely exceed the ranges reported for natural basins. Atmospheric deposition of inorganic N and artificial and/or high-impact agricultural land use are the major factors determining differences in nutrient concentration. Factors like, e.g. catchment size, precipitation amount and altitude do not play a relevant role in explaining nutrient differences between groups of reference sites. Conclusions We especially focused on (i) major causes of failure in the selection of appropriate reference sites in Italy; (ii) the potential of setting higher NO3-N thresholds for the classification of ecological status in specific areas, and (iii) the prospective of a regionalization approach, in which human effects are accepted to a low degree for reference site selection or when setting thresholds for peculiar geographical areas

Application of Laser Microdissection to plant pathogenic and symbiotic interactions

Abstract Laser Microdissection (LM) is a technology that allows the rapid procurement of selected cell populations from a section of heterogeneous tissues in a manner conducive to the extraction of DNA, RNA, proteins and even metabolites. In the past few years, it has also been applied to plant biology in order to study gene expression in plant-nematode and plant-microbe interactions. LM represents a powerful tool since cells associated with a particular infection stage can be visualized under the microscope and harvested. Therefore, verification of the response of the plant during the progression of the colonization can be performed in different cell types. Applications of LM to study the interaction between the plant and both pathogenic and symbiotic organisms (i.e. nematode and fungi, respectively) are explored in this review