A toolkit of mechanism and context independent widgets

Most human-computer interfaces are designed to run on a static platform (e.g. a workstation with a monitor) in a static environment (e.g. an office). However, with mobile devices becoming ubiquitous and capable of running applications similar to those found on static devices, it is no longer valid to design static interfaces. This paper describes a user-interface architecture which allows interactors to be flexible about the way they are presented. This flexibility is defined by the different input and output mechanisms used. An interactor may use different mechanisms depending upon their suitability in the current context, user preference and the resources available for presentation using that mechanism

Using cascading Bloom filters to improve the memory usage for de Brujin graphs

De Brujin graphs are widely used in bioinformatics for processing next-generation sequencing data. Due to a very large size of NGS datasets, it is essential to represent de Bruijn graphs compactly, and several approaches to this problem have been proposed recently. In this work, we show how to reduce the memory required by the algorithm of [3] that represents de Brujin graphs using Bloom filters. Our method requires 30% to 40% less memory with respect to the method of [3], with insignificant impact to construction time. At the same time, our experiments showed a better query time compared to [3]. This is, to our knowledge, the best practical representation for de Bruijn graphs.Comment: 12 pages, submitte

Human T‐cell lymphotrophic virus in solid‐organ transplant recipients: Guidelines from the American society of transplantation infectious diseases community of practice

These updated guidelines from the Infectious Diseases Community of Practice of the American Society of Transplantation review the diagnosis, prevention, and management of Human T‐cell lymphotrophic virus 1 (HTLV)‐1 in the pre‐ and post‐transplant period. HTLV‐1 is an oncogenic human retrovirus rare in North America but endemic in the Caribbean and parts of Africa, South America, Asia, and Oceania. While most infected persons do not develop disease, <5% will develop adult T‐cell leukemia/lymphoma or neurological disease. No proven antiviral treatment for established HTLV‐1 infection is available. The effect of immunosuppression on the development of HTLV‐1‐associated disease in asymptomatically infected recipients is not well characterized, and HTLV‐1‐infected individuals should be counseled that immunosuppression may increase the risk of developing HTLV‐1‐associated disease and they should be monitored post‐transplant for HTLV‐1‐associated disease. Currently approved screening assays do not distinguish between HTLV‐1 and HTLV‐2, and routine screening of deceased donors without risk factors in low seroprevalence areas is likely to result in significant organ wastage and is not recommended. Targeted screening of donors with risk factors for HTLV‐1 infection and of living donors (as time is available to perform confirmatory tests) is reasonable.Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/151899/1/ctr13575.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/151899/2/ctr13575_am.pd

Recommendation model based on opinion diffusion

Information overload in the modern society calls for highly efficient recommendation algorithms. In this letter we present a novel diffusion based recommendation model, with users' ratings built into a transition matrix. To speed up computation we introduce a Green function method. The numerical tests on a benchmark database show that our prediction is superior to the standard recommendation methods.Comment: 5 pages, 2 figure

Interaction of Al layers with polycrystalline Si

Auger electron spectroscopy, MeV 4He + backscattering spectrometry and scanning electron microscopy have been used to investigate interactions between Al films and polycrystalline layers of CVD Si deposited on SiO2. Depth profiling techniques showed that intermixing of the Al and Si occurred in the 400–560 °C temperature range (i.e., below the eutectic). Dissolution of the poly Si into the Al film occurs followed by nucleation and growth of Si crystallites in the Al film. The morphology of the final structure depends on the relative thicknesses of the as-deposited Al and Si layers. In the case of the original Al thickness being greater than that of the Si, the Si forms large precipitates in the Al matrix. For Al layers thinner than those of the Si, a nearly continuous Si film is formed on the outer surface. The thickness of this final Si film is approximately that of the original Al layer. The remaining Si and the Al form a two-phase layer between the outer Si film and the SiO2 substrate

On Functionality of Visibly Pushdown Transducers

Visibly pushdown transducers form a subclass of pushdown transducers that (strictly) extends finite state transducers with a stack. Like visibly pushdown automata, the input symbols determine the stack operations. In this paper, we prove that functionality is decidable in PSpace for visibly pushdown transducers. The proof is done via a pumping argument: if a word with two outputs has a sufficiently large nesting depth, there exists a nested word with two outputs whose nesting depth is strictly smaller. The proof uses technics of word combinatorics. As a consequence of decidability of functionality, we also show that equivalence of functional visibly pushdown transducers is Exptime-Complete.Comment: 20 page

Graded contractions and bicrossproduct structure of deformed inhomogeneous algebras

A family of deformed Hopf algebras corresponding to the classical maximal isometry algebras of zero-curvature N-dimensional spaces (the inhomogeneous algebras iso(p,q), p+q=N, as well as some of their contractions) are shown to have a bicrossproduct structure. This is done for both the algebra and, in a low-dimensional example, for the (dual) group aspects of the deformation.Comment: LaTeX file, 20 pages. Trivial changes. To appear in J. Phys.

QUANTIZATION OF A CLASS OF PIECEWISE AFFINE TRANSFORMATIONS ON THE TORUS

We present a unified framework for the quantization of a family of discrete dynamical systems of varying degrees of "chaoticity". The systems to be quantized are piecewise affine maps on the two-torus, viewed as phase space, and include the automorphisms, translations and skew translations. We then treat some discontinuous transformations such as the Baker map and the sawtooth-like maps. Our approach extends some ideas from geometric quantization and it is both conceptually and calculationally simple.Comment: no. 28 pages in AMSTE

Solid-phase crystallization of Si films in contact with Al layers

Low-temperature (400–540 °C) crystallization of amorphous and polycrystalline Si films deposited on SiO2 and covered with an evaporated Al layer has been studied using SEM, TEM, electron diffraction, electron channeling, and MeV 4He + backscattering. Silicon deposited by evaporation and chemical vapor deposition (CVD) at 640 °C (both amorphous) was found to crystallize into islands of polycrystalline aggregates. Silicon deposited by CVD at 900 °C (polycrystalline with ~2000-Å grains) produced relatively large (~10 µm) single-crystal islands. In both cases island size increased with annealing time, and the rate of crystallization increased with temperature. Crystallization rates were observed to be the same for both sources of amorphous Si, while 900 °C CVD Si was noticeably slower, consistent with the postulate that the driving force for the reaction is the free-energy difference between initial and final states. The crystallization rate for 900 °C CVD Si decreased when the Al layer thickness was reduced to a value less than the initial Si grain size. The inclusion of a native oxide layer between the deposited Si and Al layers greatly retarded the crystallization process