2,138 research outputs found
Generalized Bayesian Record Linkage and Regression with Exact Error Propagation
Record linkage (de-duplication or entity resolution) is the process of
merging noisy databases to remove duplicate entities. While record linkage
removes duplicate entities from such databases, the downstream task is any
inferential, predictive, or post-linkage task on the linked data. One goal of
the downstream task is obtaining a larger reference data set, allowing one to
perform more accurate statistical analyses. In addition, there is inherent
record linkage uncertainty passed to the downstream task. Motivated by the
above, we propose a generalized Bayesian record linkage method and consider
multiple regression analysis as the downstream task. Records are linked via a
random partition model, which allows for a wide class to be considered. In
addition, we jointly model the record linkage and downstream task, which allows
one to account for the record linkage uncertainty exactly. Moreover, one is
able to generate a feedback propagation mechanism of the information from the
proposed Bayesian record linkage model into the downstream task. This feedback
effect is essential to eliminate potential biases that can jeopardize resulting
downstream task. We apply our methodology to multiple linear regression, and
illustrate empirically that the "feedback effect" is able to improve the
performance of record linkage.Comment: 18 pages, 5 figure
Formation and transportation of sand-heap in an inclined and vertically vibrated container
We report the experimental findings of formation and motion of heap in
granular materials in an inclined and vertically vibrated container. We show
experimentally how the transport velocity of heap up container is related to
the driving acceleration as well as the driving frequency of exciter. An
analogous experiment was performed with a heap-shaped Plexiglas block. We
propose that cohesion force resulted from pressure gradient in ambient gas
plays a crucial role in enhancing and maintaining a heap, and ratchet effect
causes the movement of the heap. An equation which governs the transport
velocity of the heap is presented.Comment: 9 pages, 5 figures, submitted to PR
Weighted ergodic theorems for Banach-Kantorovich lattice
In the present paper we prove weighted ergodic theorems and multiparameter
weighted ergodic theorems for positive contractions acting on
. Our main tool is the use of methods of
measurable bundles of Banach-Kantorovich lattices.Comment: 11 page
The Effect of Air on Granular Size Separation in a Vibrated Granular Bed
Using high-speed video and magnetic resonance imaging (MRI) we study the
motion of a large sphere in a vertically vibrated bed of smaller grains. As
previously reported we find a non-monotonic density dependence of the rise and
sink time of the large sphere. We find that this density dependence is solely
due to air drag. We investigate in detail how the motion of the intruder sphere
is influenced by size of the background particles, initial vertical position in
the bed, ambient pressure and convection. We explain our results in the
framework of a simple model and find quantitative agreement in key aspects with
numerical simulations to the model equations.Comment: 14 pages, 16 figures, submitted to PRE, corrected typos, slight
change
High energy pion-deuteron elastic scattering
High energy pion-deuteron elastic scatterin
Spectral properties of the Dirichlet-to-Neumann operator for exterior Helmholtz problem and its applications to scattering theory
We prove that the Dirichlet-to-Neumann operator (DtN) has no spectrum in the
lower half of the complex plane. We find several application of this fact in
scattering by obstacles with impedance boundary conditions. In particular, we
find an upper bound for the gradient of the scattering amplitude and for the
total cross section. We justify numerical approximations by providing bounds on
difference between theoretical and approximated solutions without using any a
priory unknown constants
Anatomical Network Comparison of Human Upper and Lower, Newborn and Adult, and Normal and Abnormal Limbs, with Notes on Development, Pathology and Limb Serial Homology vs. Homoplasy
How do the various anatomical parts (modules) of the animal body evolve into very different integrated forms (integration) yet still function properly without decreasing the individual's survival? This long-standing question remains unanswered for multiple reasons, including lack of consensus about conceptual definitions and approaches, as well as a reasonable bias toward the study of hard tissues over soft tissues. A major difficulty concerns the non-trivial technical hurdles of addressing this problem, specifically the lack of quantitative tools to quantify and compare variation across multiple disparate anatomical parts and tissue types. In this paper we apply for the first time a powerful new quantitative tool, Anatomical Network Analysis (AnNA), to examine and compare in detail the musculoskeletal modularity and integration of normal and abnormal human upper and lower limbs. In contrast to other morphological methods, the strength of AnNA is that it allows efficient and direct empirical comparisons among body parts with even vastly different architectures (e.g. upper and lower limbs) and diverse or complex tissue composition (e.g. bones, cartilages and muscles), by quantifying the spatial organization of these parts-their topological patterns relative to each other-using tools borrowed from network theory. Our results reveal similarities between the skeletal networks of the normal newborn/adult upper limb vs. lower limb, with exception to the shoulder vs. pelvis. However, when muscles are included, the overall musculoskeletal network organization of the upper limb is strikingly different from that of the lower limb, particularly that of the more proximal structures of each limb. Importantly, the obtained data provide further evidence to be added to the vast amount of paleontological, gross anatomical, developmental, molecular and embryological data recently obtained that contradicts the long-standing dogma that the upper and lower limbs are serial homologues. In addition, the AnNA of the limbs of a trisomy 18 human fetus strongly supports Pere Alberch's ill-named "logic of monsters" hypothesis, and contradicts the commonly accepted idea that birth defects often lead to lower integration (i.e. more parcellation) of anatomical structures
First anatomical network analysis of fore- and hindlimb musculoskeletal modularity in bonobos, common chimpanzees, and humans
Studies of morphological integration and modularity, and of anatomical complexity in human evolution typically focus on skeletal tissues. Here we provide the first network analysis of the musculoskeletal anatomy of both the fore- and hindlimbs of the two species of chimpanzee and humans. Contra long-accepted ideas, network analysis reveals that the hindlimb displays a pattern opposite to that of the forelimb: Pan big toe is typically seen as more independently mobile, but humans are actually the ones that have a separate module exclusively related to its movements. Different fore- vs hindlimb patterns are also seen for anatomical network complexity (i.e., complexity in the arrangement of bones and muscles). For instance, the human hindlimb is as complex as that of chimpanzees but the human forelimb is less complex than in Pan. Importantly, in contrast to the analysis of morphological integration using morphometric approaches, network analyses do not support the prediction that forelimb and hindlimb are more dissimilar in species with functionally divergent limbs such as bipedal humans
Denaturation of Heterogeneous DNA
The effect of heterogeneous sequence composition on the denaturation of
double stranded DNA is investigated. The resulting pair-binding energy
variation is found to have a negligible effect on the critical properties of
the smooth second order melting transition in the simplest (Peyrard-Bishop)
model. However, sequence heterogeneity is dramatically amplified upon adopting
a more realistic treatment of the backbone stiffness. The model yields features
of ``multi-step melting'' similar to those observed in experiments.Comment: 4 pages, LaTeX, text and figures also available at
http://matisse.ucsd.edu/~hw
- …