Catalysing the host plant resistance: An insight into phyto-hormone mediated ISR against dry root rot of chickpea

Dry root rot (DRR) of chickpea caused by Rhizoctonia bataticola has become a serious concern to chickpea production. Changing climatic elements like frequent low soil moisture stress and high temperature are among the probable factors increasing DRR incidence in chickpea. Management of the DRR is challenging, owing to its wide host range, lack of resistant sources and uneconomical chemical control measures. Therefore, an alternate resistance management approach against this disease may be achieved by exploitation of host plant resistance through phyto-hormone mediated induced systemic resistance (ISR). The present study aims to identify the role of phyto-hormones in inducing systemic resistance against chickpea DRR. Two Phytohormones Methyl Jasmonic Acid (MeJA) and Salicylic Acid (SA) were used in this study to induce systemic resistance (ISR) against DRR. Of them MeJA was proved to be a robust in playing vital role in inducing resistance against targeted pathogen. The disease severity based on per-cent disease susceptibility index (derived from modified 0-9 rating scale) showed that plants treated with MeJA 50ppm displayed lower degree of DRR severity than the other subtreatments viz., MeJA at 25ppm and 75ppm. Also, the fungal propagule concentrations present in the root tissues sampled at different time points were analogous with theabove findings. A high positive correlation was observed in the results from real-time qPCR based absolute quantification

Diagnostic Techniques of Soil Borne Plant Diseases: Recent Advances and Next Generation Evolutionary Trends

All about 80000 diseases have been recorded in plants throughout the world, of them majority are associated with soil-borne diseases. Early, speedy and reliable detection of plant pathogens is prerequisite to optimize suitable and accurate management strategy. Traditionally, the most prevalent techniques used to identify plant pathogens relied upon culture-based morphological approaches; these methods were laborious, time-consuming. Molecular detection strategies could solve these limitations with improved accuracy and reliability. The DNA and protein based pathogen detection techniques such as DNA fingerprinting, biochemical assays, isothermal amplification techniques and serology are gaining importance in rapid soil borne pathogen detection due to their high degree of specificity to distinguish closely related organisms at different taxonomic levels. Here, we review the various molecular tools used for detection of several soil borne plant pathogens and its implementation in agriculture

Exploring Combined Effect of Abiotic (Soil Moisture) and Biotic (Sclerotium rolfsii Sacc.) Stress on Collar Rot Development in Chickpea

Plants being sessile are under constant threat of multiple abiotic and biotic stresses within its natural habitat. A combined stress involving an abiotic and a biotic factor reportedly increases susceptibility of the plants to pathogens. The emerging threat, collar rot disease of chickpea (caused by Sclerotium rolfsii Sacc.) is reported to be influenced by soil moisture condition (SMC). Hence, we studied the influence of differential SMC viz. upper optimum (100%), optimum (80%), lower optimum (60%), and limiting (40%) soil moisture conditions on colonization and collar rot development over the course of infection in two chickpea cultivars, Annigeri (susceptible to collar rot) and ICCV 05530 (moderately resistant to collar rot). Disease incidence was found to be directly proportional to increase in soil moisture (R2 = 0.794). Maximum incidence was observed at 80% SMC, followed by 100 and 60% SMC. Expression of genes (qPCR analysis) associated with host cell wall binding (lectin) and degradation viz. endopolygalacturonase-2, endoglucosidase, and cellobiohydrolase during collar rot development in chickpea were relatively less at limiting soil moisture condition (40%) as compared to optimum soil moisture condition (80%). As compared to individual stress, the expression of defense response genes in chickpea seedlings were highly up-regulated in seedlings challenged with combined stress. Our qPCR results indicated that the expression of defense-related genes in chickpea during interaction with S. rolfsii at low SMC was primarily responsible for delayed disease reaction. Involvement of moisture and biotic stress-related genes in combined stress showed a tailored defense mechanism

Exploring the Genetic Cipher of Chickpea (Cicer arietinum L.) Through Identification and Multi-environment Validation of Resistant Sources Against Fusarium Wilt (Fusarium oxysporum f. sp. ciceris)

Fusarium wilt (Fusarium oxysporum f. sp. ciceris) of chickpea is the major limitation to chickpea production worldwide. As the nature of the pathogen is soil borne, exploitation of host plant resistance is the most suitable and economical way to manage this disease. Present study was therefore conducted with an aim to find new, stable and durable sources of resistance of chickpea against Fusarium wilt through multi-environment and multi-year screening. During 2007/2008 crop season, 130 promising genotypes having <10% wilt incidence were selected from initial evaluation of 893 chickpea genotypes in wilt sick plot at ICRISAT, Patancheru. Of them 61 highly resistant lines were selected through further evaluation in 2008/2009 and 2009/2010 crop season. Finally, a set of 31 genotypes were selected to constitute a Chickpea Wilt Nursery (CWN) and tested at 10 locations in India for three cropping seasons (2010/2011, 2011/2012 and 2012/2013) coordinated through Indian Council of Agricultural Research (ICAR) and ICRISAT collaboration. The genotype and genotype × environment interaction (GGE) indicated significant variations (p ≤ 0.001) due to genotype × environment (G × E) interaction. Most of genotypes were resistant at two locations, ICRISAT (Patancheru) and Badnapur. On the contrary most of them were susceptible at Dholi and Kanpur indicating the variability in pathogen. GGE biplot analyses allowed the selection six genotypes ICCVs 98505, 07105, 07111, 07305, 08113, and 93706 with high resistance and stability across most of the locations and eight moderately resistant (<20% mean incidence) genotypes viz., ICCVs 08123, 08125, 96858, 07118, 08124, 04514, 08323, and 08117. As chickpea is grown in diverse agro-ecological zones and environments; these stable/durable sources can be used in future resistance breeding program to develop Fusarium wilt resistant cultivars

Engagement of ethics and regulatory authorities on human infection studies: proceedings of an engagement workshop in Zambia

Human infection studies (HIS) have generally been used as a tool in the pathway for vaccine development in high income settings. Over the last decade, this model has been implemented in LMICs with the aim of accelerating development of next generation vaccines that would perform better in these settings. However, in most LMICs, the ethics and regulatory framework for the conduct of these studies are not in place. In Zambia, these studies are yet to be conducted and thus we conducted a stakeholder engagement workshop in October 2019. We engaged with bioethicists, regulatory authority officials, and scientists from within Zambia and other African countries to anticipate and address foreseeable ethical and regulatory issues when conducting HIS in Zambia for the first time. The workshop largely focused on sensitizing the stakeholders on the benefits of these studies with the following main points for consideration on the implementation of these studies in Zambia: need for in-country legal framework and guidelines; need for adequate informed consent based on comprehensive understanding of the concept of HIS and study requirements; and requirements for heightened vigilance to assure participant safety including good ethical and clinical practice with regulatory, ethical, data safety, and community oversight. Additionally, the workshop emphasized the need for rigorous health screening prior to enrolment; suitable infrastructure for containment; and personnel to provide appropriate treatment including emergency resuscitation and evacuation if indicated. Specific recommendations included compensation for burden of participation; access to care and provision for study related injury (e.g. no-fault insurance); and withdrawal and exit procedures to preserve individual and community safety. Finally, the meeting concluded that researchers should actively engage key gate keepers including civic leaders such as parliamentarians, universities, researchers, potential participants and laypersons to avoid circulation of misinformation

Diseases of Chickpea

Chickpeas are one of the most economically important legumes and a rich source of carbohydrates, proteins, vitamins, minerals, and fiber. Chickpea is grown mainly in the tropics, in arid and semiarid countries in Asia and Africa, but it is also present in Europe, Oceania, North America, and Latin America. The varieties available for cultivation vary in productivity according to edaphoclimatic conditions and the incidence of diseases. The incidence and severity of diseases in chickpeas vary in relation to the planting time, cultivated variety, and the causal agent. Among the main diseases with major economic importance causing losses in productivity are those caused by soil-borne fungal and nematode pathogens, and diseases of the aerial plant portion caused by viruses and fungi. Integrated management and preventive measures such as pathogen identification, field selection, seed quality, use of fungicides, and crop rotation are effective practices for managing chickpea diseases. This chapter will address the main characteristics of the economically important diseases affecting chickpeas in several prominent and expanding production countries

Biotic Stresses in Food Legumes: An Update and Future Prospects

Pests and diseases amount to an estimated 1/sixth of farm produce losses globally each year, and overall losses in attainable yield due to pest and diseases are far greater in Asia and Africa impacting smallholder farmers’ ability to feed their families. In legumes, the production is severely affected by different species of soil-borne and foliar pathogens. Comprehensive detail of the R&D conducted on biotic stresses (diseases) in legumes with special reference to emerging diseases under changing climatic condition has been discussed in this article. Brief account of current distribution, economic importance and management strategy has also been discussed. The recent biotechnological approaches such as marker-assisted selection and genetic engineering are also being touched upon for managing these stresses