Simulation of the response of a silicon pixel detector

A model to simulate the response of a silicon pixel detector is described. The effects of geometrical charge sharing, electronic noise threshold dispersion, capacitive coupling between pixel channels and d -rays production have been taken into account. The model has been tested on the Omega3chip, which is the direct predecessor of the ALICE pixel detector, to be used in the inner tracking system of the ALICE experiment. The model is able to reproduce the experimental data and the resulting parameters are consistent with the measurements made on the Omega3chip. Key words:silicon pixel, simulation PACS:07.05.T,29.40.

Deep optical observations of the gamma-ray pulsar PSR J0007+7303 in the CTA 1 supernova remnant

The Fermi Large Area Telescope (LAT) discovered the time signature of a radio-silent pulsar coincident with RX J0007.0+7302, a plerion-like X-ray source at the centre of the CTA 1 supernova remnant. The inferred timing parameters of the gamma-ray pulsar PSR J0007+7303 (P=315.8 ms; dot{P}\sim3.6 10^{-13} s s^{-1}) point to a Vela-like neutron star, with an age comparable to that of CTA 1. The PSR J0007+7303 low distance (\sim 1.4 kpc), interstellar absorption (A_V\sim 1.6), and relatively high energy loss rate (dot{E} \sim4.5 10^{35} erg s^{-1}), make it a suitable candidate for an optical follow-up. Here, we present deep optical observations of PSR J0007+7303. The pulsar is not detected in the Gran Telescopio Canarias (GTC) images down to a limit of r'\sim 27.6 (3 sigma), the deepest ever obtained for this pulsar, while William Herschel Telescope (WHT) images yield a limit of V \sim 26.9. Our r'-band limit corresponds to an optical emission efficiency \eta_{opt}= L_{opt}/dot{E} < 9.4 10^{-8}. This limit is more constraining than those derived for other Vela-like pulsars, but is still above the measured optical efficiency of the Vela pulsar. We compared the optical upper limits with the extrapolation of the XMM-Newton X-ray spectrum and found that the optical emission is compatible with the extrapolation of the X-ray power-law component, at variance with what is observed, e.g. in the Vela pulsar.Comment: 5 pages, 3 figures, accepted for publication on MNRA

Study of a New Trigger on Multiplicity and Primary Interaction Vertex using the ALICE Silicon Pixel Detector

New trigger inputs for the ALICE Central Trigger Processor (CTP) are proposed. They are based on the use of Fast Multiplicity (FM) output signals generated by the ALICE Silicon Pixel Detector (SPD). These can be used for a multiplicity based centrality trigger and for a fast on-line computation of the primary vertex. A simple algorithm for primary vertex location at the trigger level is proposed. The precision that can be achieved with this method on centrality selection and primary vertex location, is discussed for interactions with different pseudo-rapidity density level. The feasibility of background rejection is also considered

The missing GeV {\gamma}-ray binary: Searching for HESS J0632+057 with Fermi-LAT

The very high energy (VHE; >100 GeV) source HESS J0632+057 has been recently confirmed as a \gamma-ray binary, a subclass of the high mass X-ray binary (HMXB) population, through the detection of an orbital period of 321 days. We performed a deep search for the emission of HESS J0632+057 in the GeV energy range using data from the Fermi Large Area Telescope (LAT). The analysis was challenging due to the source being located in close proximity to the bright \gamma-ray pulsar PSR J0633+0632 and lying in a crowded region of the Galactic plane where there is prominent diffuse emission. We formulated a Bayesian block algorithm adapted to work with weighted photon counts, in order to define the off-pulse phases of PSR J0633+0632. A detailed spectral-spatial model of a 5 deg circular region centred on the known location of HESS J0632+057 was generated to accurately model the LAT data. No significant emission from the location of HESS J0632+057 was detected in the 0.1-100 GeV energy range integrating over ~3.5 years of data; with a 95% flux upper limit of F_{0.1-100 GeV} < 3 x 10-8 ph cm-2 s-1. A search for emission over different phases of the orbit also yielded no significant detection. A search for source emission on shorter timescales (days--months) did not yield any significant detections. We also report the results of a search for radio pulsations using the 100-m Green Bank Telescope (GBT). No periodic signals or individual dispersed bursts of a likely astronomical origin were detected. We estimated the flux density limit of < 90/40 \mu Jy at 2/9 GHz. The LAT flux upper limits combined with the detection of HESS J0632+057 in the 136-400 TeV energy band by the MAGIC collaboration imply that the VHE spectrum must turn over at energies <136 GeV placing constraints on any theoretical models invoked to explain the \gamma-ray emission.Comment: 11 pages, 4 figures, accepted for publication in Monthly Notices of the Royal Astronomical Society (MNRAS) Main Journa

Possible Evidence of Disoriented Chiral Condensates from the Anomaly in Omega and AntiOmega Abundances at the SPS

No conventional picture of nucleus-nucleus collisions has yet been able to explain the abundance of Omega and AntiOmega in central collisions between Pb nuclei at 158 A GeV at the CERN SPS. We argue that such a deviation from predictions of statistical thermal models and numerical simulations is evidence that they are produced as topological defects in the form of skyrmions arising from the formation of disoriented chiral condensates. The estimated domain size falls in the right range to be consistent with the so far non-observation of DCC from the distribution of neutral pions.Comment: paper presented at the ICPAQGP-2001, Jaipur, Indi

Enniatin and Beauvericin Biosynthesis in Fusarium Species: Production Profiles and Structural Determinant Prediction

Citation: Liuzzi, V. C., Mirabelli, V., Cimmarusti, M. T., Haidukowski, M., Leslie, J. F., Logrieco, A. F., . . . Mule, G. (2017). Enniatin and Beauvericin Biosynthesis in Fusarium Species: Production Profiles and Structural Determinant Prediction. Toxins, 9(2), 17. doi:10.3390/toxins9020045Members of the fungal genus Fusarium can produce numerous secondary metabolites, including the nonribosomal mycotoxins beauvericin (BEA) and enniatins (ENNs). Both mycotoxins are synthesized by the multifunctional enzyme enniatin synthetase (ESYN1) that contains both peptide synthetase and S-adenosyl-L-methionine-dependent N-methyltransferase activities. Several Fusarium species can produce ENNs, BEA or both, but the mechanism(s) enabling these differential metabolic profiles is unknown. In this study, we analyzed the primary structure of ESYN1 by sequencing esyn1 transcripts from different Fusarium species. We measured ENNs and BEA production by ultra-performance liquid chromatography coupled with photodiode array and Acquity QDa mass detector (UPLC-PDA-QDa) analyses. We predicted protein structures, compared the predictions by multivariate analysis methods and found a striking correlation between BEA/ENN-producing profiles and ESYN1 three-dimensional structures. Structural differences in the beta strand's Asn789-Ala793 and His797-Asp802 portions of the amino acid adenylation domain can be used to distinguish BEA/ENN-producing Fusarium isolates from those that produce only ENN

Three-dimensional structure of human cyclooxygenase (hCOX)-1

The beneficial effects of Cyclooxygenases (COX) inhibitors on human health have been known for thousands of years. Nevertheless, COXs, particularly COX-1, have been linked to a plethora of human diseases such as cancer, heart failure, neurological and neurodegenerative diseases only recently. COXs catalyze the first step in the biosynthesis of prostaglandins (PGs) and are among the most important mediators of inflammation. All published structural work on COX-1 deals with the ovine isoenzyme, which is easier to produce in milligram-quantities than the human enzyme and crystallizes readily. Here, we report the long-sought structure of the human cyclooxygenase-1 (hCOX-1) that we refined to an R/Rfree of 20.82/26.37, at 3.36 Å resolution. hCOX-1 structure provides a detailed picture of the enzyme active site and the residues crucial for inhibitor/substrate binding and catalytic activity. We compared hCOX-1 crystal structure with the ovine COX-1 and human COX-2 structures by using metrics based on Cartesian coordinates, backbone dihedral angles, and solvent accessibility coupled with multivariate methods. Differences and similarities among structures are discussed, with emphasis on the motifs responsible for the diversification of the various enzymes (primary structure, stability, catalytic activity, and specificity). The structure of hCOX-1 represents an essential step towards the development of new and more selective COX-1 inhibitors of enhanced therapeutic potential

Clocking hadronization in relativistic heavy ion collisions with balance functions

A novel state of matter has been hypothesized to exist during the early stage of relativistic heavy ion collisions, with normal hadrons not appearing until several fm/c after the start of the reaction. To test this hypothesis, correlations between charges and their associated anticharges are evaluated with the use of balance functions. It is shown that late-stage hadronization is characterized by tightly correlated charge/anticharge pairs when measured as a function of relative rapidity.Comment: 5 pages, 3 figure