121 research outputs found
Groundwater externalities of surface irrigation transfers under National River Linking Project: Polavaram – Vijayawada link
River basin managementRiver basin developmentDevelopment projectsWater transferIrrigation canalsGroundwater irrigationTube well irrigationRiceSurface irrigationCrop managementSoil salinityWaterlogging
The lower Krishna Basin trajectory: relationships between basin development and downstream environmental degradation
River basin development / Lakes / Environmental degradation / Ecosystems / Mangroves / Water allocation / Groundwater / Water quality / Salinity / Irrigated farming / Institutions / Irrigation canals / Rural development
Impromptu Deployment of Wireless Relay Networks: Experiences Along a Forest Trail
We are motivated by the problem of impromptu or as- you-go deployment of
wireless sensor networks. As an application example, a person, starting from a
sink node, walks along a forest trail, makes link quality measurements (with
the previously placed nodes) at equally spaced locations, and deploys relays at
some of these locations, so as to connect a sensor placed at some a priori
unknown point on the trail with the sink node. In this paper, we report our
experimental experiences with some as-you-go deployment algorithms. Two
algorithms are based on Markov decision process (MDP) formulations; these
require a radio propagation model. We also study purely measurement based
strategies: one heuristic that is motivated by our MDP formulations, one
asymptotically optimal learning algorithm, and one inspired by a popular
heuristic. We extract a statistical model of the propagation along a forest
trail from raw measurement data, implement the algorithms experimentally in the
forest, and compare them. The results provide useful insights regarding the
choice of the deployment algorithm and its parameters, and also demonstrate the
necessity of a proper theoretical formulation.Comment: 7 pages, accepted in IEEE MASS 201
Privacy-Preserving Predictive Models for Lung Cancer Survival Analysis
MAASTRO clinic, the Netherlands. Privacy-preserving data mining (PPDM) is a recent emergent research area that deals with the incorporation of privacy preserving concerns to data mining techniques. We consider a real clinical setting where the data is horizontally distributed among different institutions. Each one of the medical institutions involved in this work provides a database containing a subset of patients. There is recent work that shows the potential of the PPDM approach in medical applications. However, there is few work in developing/implementing PPDM for predictive personalized medicine. In this paper we use real data from several institutions across Europe to build models for survival prediction for non-small-cell lung cancer patients while addressing the potential privacy preserving issues that may arise when sharing data across institutions located in different countries. Our experiments in a real clinical setting show that the privacy preserving approach may result in improved models while avoiding the burdens of traditional data sharing (legal and/or anonymization expenses).
Full-genome sequencing as a basis for molecular epidemiology studies of bluetongue virus in India
Since 1998 there have been significant changes in the global distribution of bluetongue virus (BTV). Ten previously exotic BTV serotypes have been detected in Europe, causing severe disease outbreaks in naïve ruminant populations. Previously exotic BTV serotypes were also identified in the USA, Israel, Australia and India. BTV is transmitted by biting midges (Culicoides spp.) and changes in the distribution of vector species, climate change, increased international travel and trade are thought to have contributed to these events. Thirteen BTV serotypes have been isolated in India since first reports of the disease in the country during 1964. Efficient methods for preparation of viral dsRNA and cDNA synthesis, have facilitated full-genome sequencing of BTV strains from the region. These studies introduce a new approach for BTV characterization, based on full-genome sequencing and phylogenetic analyses, facilitating the identification of BTV serotype, topotype and reassortant strains. Phylogenetic analyses show that most of the equivalent genome-segments of Indian BTV strains are closely related, clustering within a major eastern BTV ‘topotype’. However, genome-segment 5 (Seg-5) encoding NS1, from multiple post 1982 Indian isolates, originated from a western BTV topotype. All ten genome-segments of BTV-2 isolates (IND2003/01, IND2003/02 and IND2003/03) are closely related (>99% identity) to a South African BTV-2 vaccine-strain (western topotype). Similarly BTV-10 isolates (IND2003/06; IND2005/04) show >99% identity in all genome segments, to the prototype BTV-10 (CA-8) strain from the USA. These data suggest repeated introductions of western BTV field and/or vaccine-strains into India, potentially linked to animal or vector-insect movements, or unauthorised use of ‘live’ South African or American BTV-vaccines in the country. The data presented will help improve nucleic acid based diagnostics for Indian serotypes/topotypes, as part of control strategies
Track D Social Science, Human Rights and Political Science
Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/138414/1/jia218442.pd
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Global burden of 288 causes of death and life expectancy decomposition in 204 countries and territories and 811 subnational locations, 1990–2021: a systematic analysis for the Global Burden of Disease Study 2021
BACKGROUND Regular, detailed reporting on population health by underlying cause of death is fundamental for public health decision making. Cause-specific estimates of mortality and the subsequent effects on life expectancy worldwide are valuable metrics to gauge progress in reducing mortality rates. These estimates are particularly important following large-scale mortality spikes, such as the COVID-19 pandemic. When systematically analysed, mortality rates and life expectancy allow comparisons of the consequences of causes of death globally and over time, providing a nuanced understanding of the effect of these causes on global populations. METHODS The Global Burden of Diseases, Injuries, and Risk Factors Study (GBD) 2021 cause-of-death analysis estimated mortality and years of life lost (YLLs) from 288 causes of death by age-sex-location-year in 204 countries and territories and 811 subnational locations for each year from 1990 until 2021. The analysis used 56 604 data sources, including data from vital registration and verbal autopsy as well as surveys, censuses, surveillance systems, and cancer registries, among others. As with previous GBD rounds, cause-specific death rates for most causes were estimated using the Cause of Death Ensemble model-a modelling tool developed for GBD to assess the out-of-sample predictive validity of different statistical models and covariate permutations and combine those results to produce cause-specific mortality estimates-with alternative strategies adapted to model causes with insufficient data, substantial changes in reporting over the study period, or unusual epidemiology. YLLs were computed as the product of the number of deaths for each cause-age-sex-location-year and the standard life expectancy at each age. As part of the modelling process, uncertainty intervals (UIs) were generated using the 2·5th and 97·5th percentiles from a 1000-draw distribution for each metric. We decomposed life expectancy by cause of death, location, and year to show cause-specific effects on life expectancy from 1990 to 2021. We also used the coefficient of variation and the fraction of population affected by 90% of deaths to highlight concentrations of mortality. Findings are reported in counts and age-standardised rates. Methodological improvements for cause-of-death estimates in GBD 2021 include the expansion of under-5-years age group to include four new age groups, enhanced methods to account for stochastic variation of sparse data, and the inclusion of COVID-19 and other pandemic-related mortality-which includes excess mortality associated with the pandemic, excluding COVID-19, lower respiratory infections, measles, malaria, and pertussis. For this analysis, 199 new country-years of vital registration cause-of-death data, 5 country-years of surveillance data, 21 country-years of verbal autopsy data, and 94 country-years of other data types were added to those used in previous GBD rounds. FINDINGS The leading causes of age-standardised deaths globally were the same in 2019 as they were in 1990; in descending order, these were, ischaemic heart disease, stroke, chronic obstructive pulmonary disease, and lower respiratory infections. In 2021, however, COVID-19 replaced stroke as the second-leading age-standardised cause of death, with 94·0 deaths (95% UI 89·2-100·0) per 100 000 population. The COVID-19 pandemic shifted the rankings of the leading five causes, lowering stroke to the third-leading and chronic obstructive pulmonary disease to the fourth-leading position. In 2021, the highest age-standardised death rates from COVID-19 occurred in sub-Saharan Africa (271·0 deaths [250·1-290·7] per 100 000 population) and Latin America and the Caribbean (195·4 deaths [182·1-211·4] per 100 000 population). The lowest age-standardised death rates from COVID-19 were in the high-income super-region (48·1 deaths [47·4-48·8] per 100 000 population) and southeast Asia, east Asia, and Oceania (23·2 deaths [16·3-37·2] per 100 000 population). Globally, life expectancy steadily improved between 1990 and 2019 for 18 of the 22 investigated causes. Decomposition of global and regional life expectancy showed the positive effect that reductions in deaths from enteric infections, lower respiratory infections, stroke, and neonatal deaths, among others have contributed to improved survival over the study period. However, a net reduction of 1·6 years occurred in global life expectancy between 2019 and 2021, primarily due to increased death rates from COVID-19 and other pandemic-related mortality. Life expectancy was highly variable between super-regions over the study period, with southeast Asia, east Asia, and Oceania gaining 8·3 years (6·7-9·9) overall, while having the smallest reduction in life expectancy due to COVID-19 (0·4 years). The largest reduction in life expectancy due to COVID-19 occurred in Latin America and the Caribbean (3·6 years). Additionally, 53 of the 288 causes of death were highly concentrated in locations with less than 50% of the global population as of 2021, and these causes of death became progressively more concentrated since 1990, when only 44 causes showed this pattern. The concentration phenomenon is discussed heuristically with respect to enteric and lower respiratory infections, malaria, HIV/AIDS, neonatal disorders, tuberculosis, and measles. INTERPRETATION Long-standing gains in life expectancy and reductions in many of the leading causes of death have been disrupted by the COVID-19 pandemic, the adverse effects of which were spread unevenly among populations. Despite the pandemic, there has been continued progress in combatting several notable causes of death, leading to improved global life expectancy over the study period. Each of the seven GBD super-regions showed an overall improvement from 1990 and 2021, obscuring the negative effect in the years of the pandemic. Additionally, our findings regarding regional variation in causes of death driving increases in life expectancy hold clear policy utility. Analyses of shifting mortality trends reveal that several causes, once widespread globally, are now increasingly concentrated geographically. These changes in mortality concentration, alongside further investigation of changing risks, interventions, and relevant policy, present an important opportunity to deepen our understanding of mortality-reduction strategies. Examining patterns in mortality concentration might reveal areas where successful public health interventions have been implemented. Translating these successes to locations where certain causes of death remain entrenched can inform policies that work to improve life expectancy for people everywhere. FUNDING Bill & Melinda Gates Foundation
31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016) : part two
Background
The immunological escape of tumors represents one of the main ob- stacles to the treatment of malignancies. The blockade of PD-1 or CTLA-4 receptors represented a milestone in the history of immunotherapy. However, immune checkpoint inhibitors seem to be effective in specific cohorts of patients. It has been proposed that their efficacy relies on the presence of an immunological response. Thus, we hypothesized that disruption of the PD-L1/PD-1 axis would synergize with our oncolytic vaccine platform PeptiCRAd.
Methods
We used murine B16OVA in vivo tumor models and flow cytometry analysis to investigate the immunological background.
Results
First, we found that high-burden B16OVA tumors were refractory to combination immunotherapy. However, with a more aggressive schedule, tumors with a lower burden were more susceptible to the combination of PeptiCRAd and PD-L1 blockade. The therapy signifi- cantly increased the median survival of mice (Fig. 7). Interestingly, the reduced growth of contralaterally injected B16F10 cells sug- gested the presence of a long lasting immunological memory also against non-targeted antigens. Concerning the functional state of tumor infiltrating lymphocytes (TILs), we found that all the immune therapies would enhance the percentage of activated (PD-1pos TIM- 3neg) T lymphocytes and reduce the amount of exhausted (PD-1pos TIM-3pos) cells compared to placebo. As expected, we found that PeptiCRAd monotherapy could increase the number of antigen spe- cific CD8+ T cells compared to other treatments. However, only the combination with PD-L1 blockade could significantly increase the ra- tio between activated and exhausted pentamer positive cells (p= 0.0058), suggesting that by disrupting the PD-1/PD-L1 axis we could decrease the amount of dysfunctional antigen specific T cells. We ob- served that the anatomical location deeply influenced the state of CD4+ and CD8+ T lymphocytes. In fact, TIM-3 expression was in- creased by 2 fold on TILs compared to splenic and lymphoid T cells. In the CD8+ compartment, the expression of PD-1 on the surface seemed to be restricted to the tumor micro-environment, while CD4 + T cells had a high expression of PD-1 also in lymphoid organs. Interestingly, we found that the levels of PD-1 were significantly higher on CD8+ T cells than on CD4+ T cells into the tumor micro- environment (p < 0.0001).
Conclusions
In conclusion, we demonstrated that the efficacy of immune check- point inhibitors might be strongly enhanced by their combination with cancer vaccines. PeptiCRAd was able to increase the number of antigen-specific T cells and PD-L1 blockade prevented their exhaus- tion, resulting in long-lasting immunological memory and increased median survival
Factors that Influence Customer Satisfaction in the Motor Vehicle Service Industry in Kenya
A Research Project Report by Rao Bharat R., Submitted to the Chandaria School of Business in Partial Fulfillment of the Requirement for the Degree of Master of International Business Administratio
Inverse Engineering: A Machine Learning Approach to Support Engineering Synthesis
152 p.Thesis (Ph.D.)--University of Illinois at Urbana-Champaign, 1993.This research presents a knowledge processing methodology called inverse engineering, that uses machine learning techniques for early stage design in parameterized domains. This methodology functions as a model translator, changing the representation of analysis knowledge embedded in a unidirectional simulator, into a multidirectional model that supports design synthesis. This methodology requires addressing two issues.The first is the task of learning models from data in specified representations. This thesis describes an empirical learning algorithm called KEDS, the Knowledge-based Equation Discovery System. The user selects a restricted hypothesis space bias in the form of a class of parameterized (polynomial) model families, and KEDS learns accurate models that are restricted to those forms. In addition to being a model-driven empirical discovery system, KEDS is also a conceptual clustering system that partitions the problem domain based upon the relationships that it discovers among the problem variables. The use of the minimum description length (MDL) principle as a preference bias for KEDS provides a foundation for learning the "best" models (i.e., those that minimize predictive error on unseen data). KEDS has been applied to model three real-world domains: a diesel engine combustion chamber, a CMOS circuit for an operational amplifier, and a turning process on a lathe.The second issue is that of supporting early stage design. Current computer-aided methods for product and process design require the iterative use of computer-based analysis models in a generate-and-test fashion. While this process is essential to optimize performance during the final stages of design, it has a number of disadvantages during early design. By restricting the models families used by KEDS to forms that can provide synthesis support (hyperplanes), the user can learn a multidirectional model. The user can use this model to propagate constraints in the analysis as well as the synthesis direction. This avoids the time-consuming traditional procedure of iteratively using analysis models to support synthesis. Further this multidirectional model provides the user with great flexibility during early stage design, and the valuable ability to perform "What-if?" analysis. The inverse engineering methodology has been successfully applied to learn models to support early product design of combustion chambers for diesel engines, and to support process design for a turning machine.U of I OnlyRestricted to the U of I community idenfinitely during batch ingest of legacy ETD
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