Conversion of relativistic pair energy into radiation in the jets of active galactic nuclei

It is generally accepted that relativistic jet outflows power the nonthermal emission from active galactic nuclei (AGN). The composition of these jets -- leptonic versus hadronic -- is still under debate. We investigate the microphysical details of the conversion process of the kinetic energy in collimated relativistic pair outflows into radiation through interactions with the ambient interstellar medium. Viewed from the coordinate system comoving with the pair outflow, the interstellar protons and electrons represent a proton-electron beam propagating with relativistic speed in the pair plasma. We demonstrate that the beam excites both electrostatic and low-frequency magnetohydrodynamic Alfven-type waves via a two-stream instability in the pair background plasma, and we calculate the time evolution of the distribution functions of the beam particles and the generated plasma wave turbulence power spectra. For standard AGN jet outflow and environment parameters we show that the initial beam distributions of interstellar protons and electrons quickly relax to plateau-distributions in parallel momentum, transferring thereby one-half of the initial energy density of the beam particles to electric field fluctuations of the generated electrostatic turbulence. On considerably longer time scales, the plateaued interstellar electrons and protons will isotropise by their self-generated transverse turbulence and thus be picked-up in the outflow pair plasma. These longer time scales are also characteristic for the development of transverse hydromagnetic turbulence from the plateaued electrons and protons. This hydromagnetic turbulence upstream and downstream is crucial for diffusive shock acceleration to operate at external or internal shocks associated with pair outflows.Comment: A&A in pres

Analysis of Accordion DNA Stretching Revealed by The Gold Cluster Ruler

A promising new method for measuring intramolecular distances in solution uses small-angle X-ray scattering interference between gold nanocrystal labels (Mathew-Fenn et al, Science, 322, 446 (2008)). When applied to double stranded DNA, it revealed that the DNA length fluctuations are strikingly strong and correlated over at least 80 base pair steps. In other words, the DNA behaves as accordion bellows, with distant fragments stretching and shrinking concertedly. This hypothesis, however, disagrees with earlier experimental and computational observations. This Letter shows that the discrepancy can be rationalized by taking into account the cluster exclusion volume and assuming a moderate long-range repulsion between them. The long-range interaction can originate from an ion exclusion effect and cluster polarization in close proximity to the DNA surface.Comment: 9 pages, 4 figures, to appear in Phys. Rev.

Absolute velocity measurements in sunspot umbrae

In sunspot umbrae, convection is largely suppressed by the strong magnetic field. Previous measurements reported on negligible convective flows in umbral cores. Based on this, numerous studies have taken the umbra as zero reference to calculate Doppler velocities of the ambient active region. To clarify the amount of convective motion in the darkest part of umbrae, we directly measured Doppler velocities with an unprecedented accuracy and precision. We performed spectroscopic observations of sunspot umbrae with the Laser Absolute Reference Spectrograph (LARS) at the German Vacuum Tower Telescope. A laser frequency comb enabled the calibration of the high-resolution spectrograph and absolute wavelength positions. A thorough spectral calibration, including the measurement of the reference wavelength, yielded Doppler shifts of the spectral line Ti i 5713.9 {\AA} with an uncertainty of around 5 m s-1. The measured Doppler shifts are a composition of umbral convection and magneto-acoustic waves. For the analysis of convective shifts, we temporally average each sequence to reduce the superimposed wave signal. Compared to convective blueshifts of up to -350 m s-1 in the quiet Sun, sunspot umbrae yield a strongly reduced convective blueshifts around -30 m s-1. {W}e find that the velocity in a sunspot umbra correlates significantly with the magnetic field strength, but also with the umbral temperature defining the depth of the titanium line. The vertical upward motion decreases with increasing field strength. Extrapolating the linear approximation to zero magnetic field reproduces the measured quiet Sun blueshift. Simply taking the sunspot umbra as a zero velocity reference for the calculation of photospheric Dopplergrams can imply a systematic velocity error.Comment: 10 pages, 7 figures, 2 tables, Appendix with 5 figure

Feller Processes: The Next Generation in Modeling. Brownian Motion, L\'evy Processes and Beyond

We present a simple construction method for Feller processes and a framework for the generation of sample paths of Feller processes. The construction is based on state space dependent mixing of L\'evy processes. Brownian Motion is one of the most frequently used continuous time Markov processes in applications. In recent years also L\'evy processes, of which Brownian Motion is a special case, have become increasingly popular. L\'evy processes are spatially homogeneous, but empirical data often suggest the use of spatially inhomogeneous processes. Thus it seems necessary to go to the next level of generalization: Feller processes. These include L\'evy processes and in particular Brownian motion as special cases but allow spatial inhomogeneities. Many properties of Feller processes are known, but proving the very existence is, in general, very technical. Moreover, an applicable framework for the generation of sample paths of a Feller process was missing. We explain, with practitioners in mind, how to overcome both of these obstacles. In particular our simulation technique allows to apply Monte Carlo methods to Feller processes.Comment: 22 pages, including 4 figures and 8 pages of source code for the generation of sample paths of Feller processe

Equation of Motion for the Solvent Polarization Apparent Charges in the Polarizable Continuum Model: Application to Time-Dependent CI

The dynamics of the electrons for a molecule in solution is coupled to the dynamics of its polarizable environment, i.e., the solvent. To theoretically investigate such electronic dynamics, we have recently developed equations of motion (EOM) for the apparent solvent polarization charges that generate the reaction field in the Polarizable Continuum Model (PCM) for solvation and we have coupled them to a real-time time-dependent density functional theory (RT TDDFT) description of the solute [Corni et al. J. Phys. Chem. A 119, 5405 (2014)]. Here we present an extension of the EOM-PCM approach to a Time-Dependent Configuration Interaction (TD CI) description of the solute dynamics, which is free from the qualitative artifacts of RT TDDFT in the adiabatic approximation. As tests of the developed approach, we investigate the solvent Debye relaxation after an electronic excitation of the solute obtained either by a $\pi$ pulse of light or by assuming the idealized sudden promotion to the excited state. Moreover, we present EOM for the Onsager solvation model and we compare the results with PCM. The developed approach provides qualitatively correct real-time evolutions and is promising as a general tool to investigate the electron dynamics elicited by external electromagnetic fields for molecules in solution.Comment: This is the final peer-reviewed manuscript accepted for publication in The Journal of Chemical Physics. Copyright by AIP, the final published version can be found at http://scitation.aip.org/content/aip/journal/jcp/146/6/10.1063/1.497562

A forceful connection: mechanoregulation of oncogenic YAP

The Yes-associated protein (YAP) is an important transcriptional co-activator that mediates the cellular response to mechanical and cytoskeletal cues. In two recent papers published in The EMBO Journal, Dae-Sik Lim and colleagues show how YAP activity affects cancer formation and metastasis via a crosstalk with myocardin-related transcription factors (MRTFs; Kim et al, 2017) and SKP2-dependent cell cycle progressio

Interpretation of increased energetic particle flux measurements by SEPT aboard the STEREO spacecraft and contamination

Context. Interplanetary (IP) shocks are known to be accelerators of energetic charged particles observed in-situ in the heliosphere. However, the acceleration of near-relativistic electrons by shocks in the interplanetary medium is often questioned. On 9 August 2011 a Corotating Interaction Region (CIR) passed STEREO B (STB) that resulted in a flux increase in the electron and ion channels of the Solar Electron and Proton Telescope (SEPT). Because electron measurements in the few keV to several 100 keV range rely on the so-called magnet foil technique, which is utilized by SEPT, ions can contribute to the electron channels. Aims. We aim to investigate whether the flux increase in the electron channels of SEPT during the CIR event on 9 August 2011 is caused by ion contamination only. Methods. We compute the SEPT response functions for protons and helium utilizing an updated GEANT4 model of SEPT. The CIR energetic particle ion spectra for protons and helium are assumed to follow a Band function in energy per nucleon with a constant helium to proton ratio. Results. Our analysis leads to a helium to proton ratio of 16.9% and a proton flux following a Band function with the parameters $I_0 = 1.24 \cdot 10^4$ / (cm2 s sr MeV/nuc.), $E_c = 79$ keV/nuc. and spectral indices of $\gamma_1 = -0.94$ and $\gamma_2 = -3.80$ which are in good agreement with measurements by the Suprathermal Ion Telescope (SIT) aboard STB. Conclusions. Since our results explain the SEPT measurements, we conclude that no significant amount of electrons were accelerated between $55$ keV and $425$ keV by the CIR

A new ordering parameter of spectral energy distributions from synchrotron-self-Compton emitting blazars

The broadband SEDs of blazars exhibit two broad spectral components, which in leptonic emission models are attributed to synchrotron radiation and synchrotron self-Compton (SSC) radiation of relativistic electrons. During high state phases, the high-frequency SSC component often dominates the low-frequency synchrotron component, implying that the inverse Compton SSC losses of electrons are at least equal to or greater than the synchrotron losses of electrons. We calculate from the analytical solution of the kinetic equation of relativistic electrons, subject to the combined linear synchrotron and nonlinear synchrotron self-Compton cooling, for monoenergetic injection the time-integrated total synchrotron and SSC radiation fluences and spectral energy distributions (SED). Depending on the ratio of the initial cooling terms, displayed by the injection parameter $\alpha$, we find for $\alpha\ll 1$, implying complete linear cooling, that the synchrotron peak dominates the inverse Compton peak and the usual results of the spectra are recovered. For $\alpha\gg 1$ the SSC peak dominates the synchrotron peak, proving our assumption that in such a case the cooling becomes initially non-linear. The spectra also show some unique features, which can be attributed directly to the non-linear cooling. To show the potential of the model, we apply it to outbursts of 3C 279 and 3C 454.3, successfully reproducing the SEDs. The results of our analysis are promising, and we argue that this non-equilibrium model should be considered in future modeling attempts for blazar flares.Comment: accepted by MNRAS, 32 pages (single column), 7 figure