Metallic and semi-metallic <100> silicon nanowires

Silicon nanowires grown along the -direction with a bulk Si core are studied with density functional calculations. Two surface reconstructions prevail after exploration of a large fraction of the phase space of nanowire reconstructions. Despite their energetical equivalence, one of the reconstructions is found to be strongly metallic while the other one is semi-metallic. This electronic-structure behavior is dictated by the particular surface states of each reconstruction. These results imply that doping is not required in order to obtain good conducting Si nanowires.Comment: 13 pages, 4 figures; Phys. Rev. Lett., in pres

Mixed partial-wave scattering with spin-orbit coupling and validity of pseudo-potentials

We present exact solutions of two-body problem for spin-1/2 fermions with isotropic spin-orbit(SO) coupling and interacting with an arbitrary short-range potential. We find that in each partial-wave scattering channel, the parametrization of two-body wavefunction at short inter-particle distance depends on the scattering amplitudes of all channels. This reveals the mixed partial-wave scattering induced by SO couplings. By comparing with results from a square-well potential, we investigate the validity of original pseudo-potential models in the presence of SO coupling. We find the s-wave pseudo-potential provides a good approximation for low-energy solutions near s-wave resonances, given the length scale of SO coupling much longer than the potential range. However, near p-wave resonance the p-wave pseudo-potential gives low-energy solutions that are qualitatively different from exact ones, based on which we conclude that the p-wave model can not be applied to the fermion system if the SO coupling strength is larger or comparable to the Fermi momentum.Comment: 10 pages, 8 figures. Published version with figures improve

Opaque Service Virtualisation: A Practical Tool for Emulating Endpoint Systems

Large enterprise software systems make many complex interactions with other services in their environment. Developing and testing for production-like conditions is therefore a very challenging task. Current approaches include emulation of dependent services using either explicit modelling or record-and-replay approaches. Models require deep knowledge of the target services while record-and-replay is limited in accuracy. Both face developmental and scaling issues. We present a new technique that improves the accuracy of record-and-replay approaches, without requiring prior knowledge of the service protocols. The approach uses Multiple Sequence Alignment to derive message prototypes from recorded system interactions and a scheme to match incoming request messages against prototypes to generate response messages. We use a modified Needleman-Wunsch algorithm for distance calculation during message matching. Our approach has shown greater than 99% accuracy for four evaluated enterprise system messaging protocols. The approach has been successfully integrated into the CA Service Virtualization commercial product to complement its existing techniques.Comment: In Proceedings of the 38th International Conference on Software Engineering Companion (pp. 202-211). arXiv admin note: text overlap with arXiv:1510.0142

Spectroscopic signatures of the Larkin-Ovchinnikov state in the conductance characteristics of a normal-metal/superconductor junction

Using a discrete-lattice approach, we calculate the conductance spectra between a normal metal and an s-wave Larkin-Ovchinnikov (LO) superconductor, with the junction interface oriented {\em along} the direction of the order-parameter (OP) modulation. The OP sign reversal across one single nodal line can induce a sizable number of zero-energy Andreev bound states around the nodal line, and a hybridized midgap-states band is formed amid a momentum-dependent gap as a result of the periodic array of nodal lines in the LO state. This band-in-gap structure and its anisotropic properties give rise to distinctive features in both the point-contact and tunneling spectra as compared with the BCS and Fulde-Ferrell cases. These spectroscopic features can serve as distinguishing signatures of the LO state.Comment: 8 pages, 5 figures; version as publishe

Clustering Scatter Plots Using Data Depth Measures.

Clustering is rapidly becoming a powerful data mining technique, and has been broadly applied to many domains such as bioinformatics and text mining. However, the existing methods can only deal with a data matrix of scalars. In this paper, we introduce a hierarchical clustering procedure that can handle a data matrix of scatter plots. To more accurately reflect the nature of data, we introduce a dissimilarity statistic based on "data depth" to measure the discrepancy between two bivariate distributions without oversimplifying the nature of the underlying pattern. We then combine hypothesis testing with hierarchical clustering to simultaneously cluster the rows and columns of the data matrix of scatter plots. We also propose novel painting metrics and construct heat maps to allow visualization of the clusters. We demonstrate the utility and power of our new clustering method through simulation studies and application to a microbe-host-interaction study

LexOWL: A Bridge from LexGrid to OWL

The Lexical Grid project is an on-going community driven initiative that provides a common terminology model to represent multiple vocabulary and ontology sources as well as a scalable and robust API for accessing such information. In order to add more powerful functionalities to the existing infrastructure and align LexGrid more closely with various Semantic Web technologies, we introduce the LexOWL project for representing the ontologies modeled within the LexGrid environment in OWL (Web Ontology Language). The crux of this effort is to create a &#x201c;bridge&#x201d; that functionally connects the LexBIG (a LexGrid API) and the OWL API (an interface that implements OWL) seamlessly. In this paper, we discuss the key aspects of designing and implementing the LexOWL bridge. We compared LexOWL with other OWL converting tools and conclude that LexOWL provides an OWL mapping and converting tool with well-defined interoperability for information in the biomedical domain