Evaluating the influence of lake morphology, trophic status and diagenesis on geochemical profiles in lake sediments

Recent geochemical studies provide evidence that changes in vertical distributions of nutrients in lake sediments are driven by anthropogenic activities, based primarily on trends of increasing concentrations in upper sediment layers. However, we show that vertical concentration profiles of carbon (C), nitrogen (N) and phosphorus (P) in lake sediments can be higher in the upper, most recently deposited sediment strata, driven largely by natural diagenetic processes and not eutrophication alone. We examined sediment cores from 14 different lakes in New Zealand and China ranging from oligotrophic to highly eutrophic and shallow to deep, and found that the shape of vertical profiles of total P, a key nutrient for lake productivity, can be similar in sediments across gradients of widely differing trophic status. We derived and applied empirical and mechanistic diagenesis steady state profile models to describe the vertical distribution of C, N and P in the sediments. These models, which focus on large scale temporal (decades) and spatial (up to 35 cm in the vertical) processes, revealed that density-differentiated burial and biodiffusive mixing, were strongly correlated with vertical concentration gradients of sediment C, N and P content, whereas lake trophic status was not. A sensitivity analysis of parameters included in the diagenetic model further showed that the processes including flux of organic matter to the sediment-water interface, burial (net sedimentation), breakdown of organic matter and biodiffusion all significantly can influence the vertical distribution of sediment P content. We conclude that geochemical studies attempting to evaluate drivers of the vertical distribution of sediment C, N, and P content in lake sediments should also account for the natural diagenetic drivers of vertical concentration gradients, assisted with application of similar models to those presented in this study. This would include quantification of key sediment diagenesis model parameters to separate out the influence of anthropogenic activities

Temporal and spatial variations in phytoplankton productivity in surface waters of a warm-temperate, monomictic lake in New Zealand

Surface phytoplankton productivity measurements were carried out in morphologically complex Lake Rotoiti with the objective of defining variations between sites and seasons, and the dominant environmental drivers of these variations. Measurements were carried out monthly at two depths at each of three morphologically diverse stations for 1 year throughout the lake. Productivity at the surface of the shallow embayment was significantly higher in most months of the year compared with the surface of the other two stations but there were no significant differences from September to December 2004. There were no relationships between measured environmental variables and primary productivity or specific production. Inorganic nutrient concentrations at the surface of the shallow station were low throughout the whole year but at the other two stations they showed a typical pattern for monomictic lakes of higher levels during winter mixing and declining concentrations during thermal stratification. The high variability between sites found in this study indicates that it is important to account for local differences in productivity in morphologically diverse lakes, and that whole lake productivity estimates may vary greatly depending on the location and depth of productivity measurements

The differential response of kelp to swell and infragravity wave motion

We present field measurements of the movement of the giant kelp Macrocystis pyrifera under wave forcing. We resolve the depth and frequency-dependent responses along the stipe and find different and counterintuitive patterns of response at the infragravity and swell wave forcing frequencies. At swell frequencies, tilting of the stipe is largest toward the holdfast, whereas at infragravity frequencies, the stipe tilting is largest closer to the water surface. It is postulated that the stretching of blades and subsequent pull on the stipe is, in part, responsible for these patterns. This conclusion is supported by results of manipulative experiments, which show a more along-stipe uniform response after removal of blades from the kelp. The length of the kelp also exerts a strong control on the relative magnitudes of movements in the different frequency bands, with the swell band becoming more important relative to the infragravity band for shorter length kelp. These results indicate that kelp will differentially dissipate energy over both frequencies and varying depths within the water column. The variety of movement responses over differing wave forcing frequencies may also imply that there exist differing rates of breakage for kelp exposed to hydrodynamics stressors of multiple frequencies

On the stabilizing influence of silt on sand beds

In marine environments, sediments from different sources are stirred and dispersed, generating beds that are composed of mixed and layered sediments of differing grain sizes. Traditional engineering formulations used to predict erosion thresholds are however, generally for unimodal sediment distributions, and so may be inadequate for commonly occurring coastal sediments. We tested the transport behavior of deposited and mixed sediment beds consisting of a simplified two-grain fraction (silt (D50  =  55 µm) and sand (D50 =  300 µm)) in a laboratory-based annular flume with the objective of investigating the parameters controlling the stability of a sediment bed. To mimic recent deposition of particles following large storm events and the longer-term result of the incorporation of fines in coarse sediment, we designed two suites of experiments: (1) “the layering experiment”: in which a sandy bed was covered by a thin layer of silt of varying thickness (0.2–3 mm; 0.5–3.7 wt %, dry weight in a layer 10 cm deep); and (2) “the mixing experiment” where the bed was composed of sand homogeneously mixed with small amounts of silt (0.07–0.7 wt %, dry weight). To initiate erosion and to detect a possible stabilizing effect in both settings, we increased the flow speeds in increments up to 0.30 m/s. Results showed that the sediment bed (or the underlying sand bed in the case of the layering experiment) stabilized with increasing silt composition. The increasing sediment stability was defined by a shift of the initial threshold conditions towards higher flow speeds, combined with, in the case of the mixed bed, decreasing erosion rates. Our results show that even extremely low concentrations of silt play a stabilizing role (1.4% silt (wt %) on a layered sediment bed of 10 cm thickness). In the case of a mixed sediment bed, 0.18% silt (wt %, in a sample of 10 cm depth) stabilized the bed. Both cases show that the depositional history of the sediment fractions can change the erosion characteristics of the seabed. These observations are summarized in a conceptual model that suggests that, in addition to the effect on surface roughness, silt stabilizes the sand bed by pore-space plugging and reducing the inflow in the bed, and hence increases the bed stability. Measurements of hydraulic conductivity on similar bed assemblages qualitatively supported this conclusion by showing that silt could decrease the permeability by up to 22% in the case of a layered bed and by up to 70% in the case of a mixed bed

Phylogeography of New Zealand’s coastal benthos

During the past 30 years, 42 molecular studies have been undertaken in New Zealand to examine the phylogeography of coastal benthic invertebrates and plants. Here, we identify generalities and/or patterns that have emerged from this research and consider the processes implicated in generating genetic structure within populations. Studies have used various molecular markers and examined taxonomic groups with a range of life histories and dispersal strategies. Genetic disjunctions have been identified at multiple locations, with the most frequently observed division occurring between northern and southern populations at the top of the South Island. Although upwelling has been implicated as a cause of this disjunction, oceanographic evidence is lacking and alternative hypotheses exist. A significant negative correlation between larval duration and genetic differentiation (r2 = 0.39, P < 0.001, n = 29) across all studies suggests that larval duration might be used as a proxy for dispersal potential. However, among taxa with short larval durations (<10 days) there was greater variability in genetic differentiation than among taxa with longer pelagic periods. This variability implies that when larval duration is short, other factors may determine dispersal and connectivity among populations. Although there has been little congruence between the phylogeographic data and recognised biogeographic regions, recent research has resolved population subdivision at finer spatial scales corresponding more closely with existing biogeographic classifications. The use of fast-evolving and ecologically significant molecular markers in hypothesis-driven research could further improve our ability to detect population subdivision and identify the processes structuring marine ecosystems

Temporal Variation in Resuspension Potential and Associated Nutrient Dynamics in Shallow Coastal Environments

Sediment resuspension may play a major role in sediment-water exchange of nutrients, matter and energy in coastal areas where waves and currents dominate sediment transport. Biogeochemical sediment properties regulate sediment erodibility, but there is only limited knowledge of how temporal variability in environmental variables is reflected in the resuspension potential, especially for subtidal habitats. Further, the significance of resuspension on nutrient fluxes in coastal environments has remained unclear as contradicting results have been reported. Here we quantified the temporal variation in resuspension potential metrics (erosion threshold (τc; N m−2) and erosion constant (me; g N−1 s−1)) and associated nutrient fluxes from three sites in the Hanko archipelago (Finland) using a core-based erosion device (EROMES). The sites were sampled bi-monthly from April to December. We also quantified the temporal variation in biogeochemical sediment properties at each site. The τc exhibited the clearest temporal pattern in muddy sediment, where the coefficient of variation (= 67) was two to three times higher than the mixed (= 29) and sandy (= 16) sediments. Dry bulk density was the best predictor for sediment erodibility at all sites explaining 26–46% of the temporal variation in τc despite its limited variability at sandier sites. In addition, temporal variations in the macrofaunal community were important predictors of muddy sediment erodibility and therefore community dynamics need to be considered in sediment transport studies. All sites were potential nutrient sources, yet the overall role of sediment resuspension on nutrient release from the sediments was small.Peer reviewe

The hydrodynamics of the southern basin of Tauranga Harbour

The circulation of the southern basin of Tauranga Harbour was simulated using a 3-D hydrodynamic model ELCOM. A 9-day field campaign in 1999 provided data on current velocity, temperature and salinity profiles at three stations within the main basin. The tidal wave changed most in amplitude and speed in the constricted entrances to channels, for example the M2 tide attenuated by 10% over 500 m at the main entrance, and only an additional 17% over the 15 km to the top of the southern basin. The modelled temperature was sensitive to wind mixing, particularly in tidal flat regions. Residence times ranged from 3 to 8 days, with higher residence times occurring in sub-estuaries with constricted mouths. The typical annual storm events were predicted to reduce the residence times by 24%–39% depending on season. Model scenarios of storm discharge events in the Wairoa River varying from 41.69 m3/s to 175.9 m3/s show that these events can cause salinity gradients across the harbour of up to 4 PSU

Abundance of small individuals influences the effectiveness of processing techniques for deep-sea nematodes

Nematodes are the most abundant metazoans of deep-sea benthic communities, but knowledge of their distribution is limited relative to larger organisms. Whilst some aspects of nematode processing techniques, such as extraction, have been extensively studied, other key elements have attracted little attention. We compared the effect of (1) mesh size (63, 45, and 32 μm) on estimates of nematode abundance, biomass, and body size, and (2) microscope magnification (50 and 100×) on estimates of nematode abundance at bathyal sites (250-3100 m water depth) on the Challenger Plateau and Chatham Rise, south-west Pacific Ocean. Variation in the effectiveness of these techniques was assessed in relation to nematode body size and environmental parameters (water depth, sediment organic matter content, %silt/clay, and chloroplastic pigments). The 63-μm mesh retained a relatively low proportion of total nematode abundance (mean ±SD = 55 ±9%), but most of nematode biomass (90 ± 4%). The proportion of nematode abundance retained on the 45-μm mesh in surface (0-1 cm) and subsurface (1-5 cm) sediment was significantly correlated (P < 0.01) with %silt/clay (R² = 0.39) and chloroplastic pigments (R² = 0.29), respectively. Variation in median nematode body weight showed similar trends, but relationships between mean nematode body weight and environmental parameters were either relatively weak (subsurface sediment) or not significant (surface sediment). Using a low magnification led to significantly lower (on average by 43%) nematode abundance estimates relative to high magnification (P < 0.001), and the magnitude of this difference was significantly correlated (P < 0.05) with total nematode abundance (R²p = 0.53) and the number of small (≤ 250 μm length) individuals (R²p = 0.05). Our results suggest that organic matter input and sediment characteristics influence the abundance of small nematodes in bathyal communities. The abundance of small individuals can, in turn, influence abundance estimates obtained using different mesh sizes and microscope magnifications

Estimating the effect of burrowing shrimp on deep-sea sediment community oxygen consumption

Sediment community oxygen consumption (SCOC) is a proxy for organic matter processing and thus provides a useful proxy of benthic ecosystem function. Oxygen uptake in deep-sea sediments is mainly driven by bacteria, and the direct contribution of benthic macro- and mega-infauna respiration is thought to be relatively modest. However, the main contribution of infaunal organisms to benthic respiration, particularly large burrowing organisms, is likely to be indirect and mainly driven by processes such as feeding and bioturbation that stimulate bacterial metabolism and promote the chemical oxidation of reduced solutes. Here, we estimate the direct and indirect contributions of burrowing shrimp (Eucalastacus cf. torbeni) to sediment community oxygen consumption based on incubations of sediment cores from 490 m depth on the continental slope of New Zealand. Results indicate that the presence of one shrimp in the sediment is responsible for an oxygen uptake rate of about 40 µmol d−1, only 1% of which is estimated to be due to shrimp respiration. We estimate that the presence of ten burrowing shrimp m−2 of seabed would lead to an oxygen uptake comparable to current estimates of macro-infaunal community respiration on Chatham Rise based on allometric equations, and would increase total sediment community oxygen uptake by 14% compared to sediment without shrimp. Our findings suggest that oxygen consumption mediated by burrowing shrimp may be substantial in continental slope ecosystems

Tipping Points in Coastal Ecosystems

Change can happen fast in our coastal ecosystems and we often do not know what has been lost until it’s too late. Once ecological ‘tipping points’ are passed, it is difficult to reverse the state of the ecosystem.1 Often these changes creep up on us because they are caused by the cumulative impact of multiple stressors. These changes in ecosystems mean we can lose important ecosystem functions that underpin many of the things we value about out coastal ecosystems. One of the key challenges of ecosystem-based management (EBM) is therefore to identify what combination of stressors are likely to cause threshold changes and what parts of the ecosystem are most likely to be affected. A multi-institutional team of scientists from across New Zealand is conducting the science to assess the risk of passing these ‘tipping points’ in estuaries before they happen