MOESM1 of Contemporary epidemiological overview of malaria in Madagascar: operational utility of reported routine case data for malaria control planning

Additional file 1. Summary of data sources consulted. The table provides details of the data sources used for each figure in the paper

MOESM4 of Contemporary epidemiological overview of malaria in Madagascar: operational utility of reported routine case data for malaria control planning

Additional file 4. Additional plots of the trends of reported malaria case data in Madagascar (2010–2015). This file provides additional analysis of the temporal trends in the reported malaria data. Data are adjusted for reporting and diagnostic shortages, and trends are examined using autocorrelation plots, generalized additive models and linear regression models

ALGORITHMIC SUPPORT OF COMPUTER-AIDED DATA PROCESSING SYSTEMS IN HYDROPHYSICAL EXPERIMENT

The work covers the water systems of Socialist Republic of Vietnam. The aim is to analyse the hydrophysical experiment problem taking correlations of the spatial and time scales into consideration and to select on this base the data processing algorithms providing the muptiplanned representation of the studied parameter regularities and to create the necessary software. The computer circuits for analysis of the dynamic processes in the hydrophysical experiment have been developed, and the theoretical evalutions of accuracy in this circuits have been obtained. The software for realization of the developed methods, algorithms and models in the commputer experiment have been created. On their base the processing of the experimental data on the study of the dynamic characteristics in water objects on the South Vietnam territory has been perfomedAvailable from VNTIC / VNTIC - Scientific & Technical Information Centre of RussiaSIGLERURussian Federatio

Cytomegalovirus Reinfections Stimulate CD8 T-Memory Inflation

<div><p>Cytomegalovirus (CMV) has been shown to induce large populations of CD8 T-effector memory cells that unlike central memory persist in large quantities following infection, a phenomenon commonly termed “memory inflation”. Although murine models to date have shown very large and persistent CMV-specific T-cell expansions following infection, there is considerable variability in CMV-specific T-memory responses in humans. Historically such memory inflation in humans has been assumed a consequence of reactivation events during the life of the host. Because basic information about CMV infection/re-infection and reactivation in immune competent humans is not available, we used a murine model to test how primary infection, reinfection, and reactivation stimuli influence memory inflation. We show that low titer infections induce “partial” memory inflation of both mCMV specific CD8 T-cells and antibody. We show further that reinfection with different strains can boost partial memory inflation. Finally, we show preliminary results suggesting that a single strong reactivation stimulus does not stimulate memory inflation. Altogether, our results suggest that while high titer primary infections can induce memory inflation, reinfections during the life of a host may be more important than previously appreciated.</p></div

Phenotypic analysis of murine cytomegalovirus (mCMV) specific T-cells after low titer infection.

<p>Mice infected intraperitoneally at 8–10 weeks of age with 10² or 10⁶ plaque forming units (pfu) Smith mCMV had peripheral blood evaluated by flow cytometry for m123 and m164-specific CD8 T-cells 16 weeks after infection. mCMV-specific CD8+ T-cells identified with tetramer staining were further evaluated for surface expression of CD44, CD27, CD62L, and KLRG1. Representative superimposed histograms from n = 5 replicates each of low titer (10² pfu, open line) and high titer (10⁶ pfu, gray filled) mice are shown.</p

Murine Cytomegalovirus (mCMV) specific T-cell inflation depends upon infecting dose.

<p>Mice 8–10 weeks old infected intraperitoneally with 10² (<b>A&E</b>), 10³ (<b>B&F</b>), 10⁴ (<b>C&G</b>), or 10⁶ (<b>D&H</b>) plaque forming units (pfu) Smith strain mCMV had peripheral blood mononuclear cells (PBMC) evaluated 16 weeks after infection for inflationary mCMV-specific T-cells. PBMC incubated with tetramers specific for m164 (<b>A-D</b>) or m123 (<b>E-H</b>) epitopes and CD8 were evaluated by flow cytometry and representative scatter plots from individual mice are shown. Mice infected with 10⁶ pfu mCMV show classic inflation of m164 and m123-specific CD8+ cells as previously described by others (<b>D&H</b>). In contrast, mice infected with lower titers show less inflation by 16 weeks (m164 <b>A-C</b>, pp89 <b>E-G</b>). <b>I&J.</b> Summary of m164 and m123-specific T-cell results for each cohort 16 weeks after infection. Results represent a single longitudinal experiment. For I-J each point represents a single mouse, and bars represent mean and standard error for each cohort with corresponding p-values in comparison to naive.</p

Influence of reinfection on T-cell and antibody inflation.

<p>Cohorts of mice infected at 8–10 weeks of age with 10² plaque forming units (pfu) Smith strain murine cytomegalovirus (mCMV) were evaluated over time beginning 154 days (22 weeks) after primary infection. Peripheral blood mononuclear cells (PBMC) were evaluated for m123 and m164-specific T-cells 1 week prior to and then sequentially after reinfection (dark arrowhead) with K181 mCMV or mock treatment with vehicle. CD8 T-cell results following reinfections are expressed relative to age and infection duration matched 10⁶ control mice (not shown). Lower panels show mCMV-specific IgG responses. ▲represents mock reinfection, while ○ and ♦ represent reinfections with K181 at respectively 10² or 10⁶ pfu. Data presented are from single longitudinal experiments with each data point representing means of n = 5 mice, with bars showing standard errors. * indicates significantly different than mock reinfected mice (p<0.05), and NS indicates no significant difference (p>0.05).</p

Memory inflation after reactivation stimuli.

<p>Mice latently infected with low titer (10² plaque forming units (pfu)) Smith strain cytomegalovirus (mCMV) (infected at 8–10 weeks of age and allowed 16 weeks to develop latency) were treated with a transcriptional reactivation stimulus lipopolysaccharide (LPS) or control (saline) (both administered intraperitoneal (i.p.)). <b>A</b>. Latently infected mice (16 weeks post-infection (pi)) were treated with LPS and 12 weeks later peripheral blood mononuclear cells (PBMC) were evaluated for mCMV m123 and m164 specific T-cells. PBMC results are absolute percentages of CD8+ cells binding tetramers. <b>B</b>. Latently infected mice 22 weeks after low titer infection had PBMC monitored serially for m123 and m164 specific T-cells, and results are expressed as % of CD8+ cells binding tetramer relative to a 10⁶ pfu control cohort for each time. Data presented are from one of three separate experiments with each point/bars representing means and standard errors from n = 5 mice.</p

Verification of productive infection and viral DNA load of mice infected with different doses of mCMV Smith.

<p>Mice infected at 8–10 weeks of age with 10², 10³, 10⁴ or 10⁶ plaque forming units (pfu) mCMV Smith strain or mock treated with PBS were evaluated on day 10 post infection. Viral DNA loads were determined individually for <b>A.</b> lungs and <b>B.</b> Salivary glands of 5 mice per group. <b>C.</b> Salivary gland viral titers were quantitated in pfu/ml to confirm productive infection. Results represent a single experiment with mean values and standard errors indicated by horizontal bar and error bars, with individual dots representing each mouse. Mock treated mice had no detectable viral DNA or infectious virus. * indicates that means were significantly higher than mock. ** indicates that means are significantly lower than mice infected with 10⁶ pfu. Comparisons were by Students t-test using p-value <0.05.</p

Additional file 1: of Spatio-temporal mapping of Madagascar’s Malaria Indicator Survey results to assess Plasmodium falciparum endemicity trends between 2011 and 2016

Figure S1. Sample screening during the three MIS events in Madagascar, showing the progressive delay in the sampling time window. a Overall bar plots of sampling months. b–d Maps by sampling month by cluster location. (PNG 1353 kb