97 research outputs found

    Partition of a Binary Matrix into k

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    A biclustering problem consists of objects and an attribute vector for each object. Biclustering aims at finding a bicluster—a subset of objects that exhibit similar behavior across a subset of attributes, or vice versa. Biclustering in matrices with binary entries (“0”/“1”) can be simplified into the problem of finding submatrices with entries of “1.” In this paper, we consider a variant of the biclustering problem: the k-submatrix partition of binary matrices problem. The input of the problem contains an n×m matrix with entries (“0”/“1”) and a constant positive integer k. The k-submatrix partition of binary matrices problem is to find exactly k submatrices with entries of “1” such that these k submatrices are pairwise row and column exclusive and each row (column) in the matrix occurs in exactly one of the k submatrices. We discuss the complexity of the k-submatrix partition of binary matrices problem and show that the problem is NP-hard for any k≥3 by reduction from a biclustering problem in bipartite graphs

    Overall PSD and Fractal Characteristics of Tight Oil Reservoirs: A Case Study of Lucaogou Formation in Junggar Basin, China

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    Lucaogou tight oil reservoir, located in the Junggar Basin, Northwest of China, is one of the typical tight oil reservoirs. Complex lithology leads to a wide pore size distribution (PSD), ranging from several nanometers to hundreds of micrometers. To better understand PSD and fractal features of Lucaogou tight oil reservoir, the experiment methods including scanning electron microscope (SEM), rate-controlled mercury injection (RMI) and pressure-controlled mercury injection (PMI) were performed on the six samples with different lithology. The results indicate that four types of pores exist in Lucaogou tight oil reservoir, including dissolution pores, clay dominated pores, microfractures and inter-granular pores. A combination of PMI and RMI was proposed to calculate the overall PSD of tight oil reservoirs, the overall pore radius of Lucaogou tight oil reservoir ranges from 3.6 nm to 500µm. The fractal analysis was carried out based on the PMI data. Fractal dimension (Fd) values varied between 2.843 and 2.913 with a mean value of 2.88. Fd increases with a decrease of quartz content and an increase of clay mineral content. Samples from tight oil reservoirs with smaller average pore radius have stronger complexity of pore structure. Fractal dimension shows negative correlations with porosity and permeability. In addition, fractal characteristics of different tight reservoirs were compared and analyzed

    Normal Leptin Expression, Lower Adipogenic Ability, Decreased Leptin Receptor and Hyposensitivity to Leptin in Adolescent Idiopathic Scoliosis

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    Leptin has been suggested to play a role in the etiology of Adolescent Idiopathic Scoliosis (AIS), however, the leptin levels in AIS girls are still a discrepancy, and no in vitro study of leptin in AIS is reported. We took a series of case-control studies, trying to understand whether Leptin gene polymorphisms are involved in the etiology of the AIS or the change in leptin level is a secondary event, to assess the level of leptin receptor, and to evaluate the differences of response to leptin between AIS cases and controls. We screened all exons of Leptin gene in 45 cases and 45 controls and selected six tag SNPs to cover all the observed variations. Association analysis in 446 AIS patients and 550 healthy controls showed no association between the polymorphisms of Leptin gene and susceptibility/severity to AIS. Moreover, adipogenesis assay of bone mesenchymal stem cells (MSCs) suggested that the adipogenic ability of MSCs from AIS girls was lower than controls. After adjusting the differentiation rate, expressions of leptin and leptin receptor were similar between two groups. Meanwhile, osteogenesis assay of MSC showed the leptin level was similar after adjusting the differentiation rate, but the leptin receptor level was decreased in induced AIS osteoblasts. Immunocytochemistry and western blot analysis showed less leptin receptors expressed in AIS group. Furthermore, factorial designed studies with adipogenesis and osteogenesis revealed that the MSCs from patients have no response to leptin treatment. Our results suggested that Leptin gene variations are not associated with AIS and low serum leptin probably is a secondary outcome which may be related to the low capability of adipogenesis in AIS. The decreased leptin receptor levels may lead to the hyposensitivity to leptin. These findings implied that abnormal peripheral leptin signaling plays an important role in the pathological mechanism of AIS

    Pore Structure Characterization and the Controlling Factors of the Bakken Formation

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    The Bakken Formation is a typical tight oil reservoir and oil production formation in the world. Pore structure is one of the key factors that determine the accumulation and production of the hydrocarbon. In order to study the pore structures and main controlling factors of the Bakken Formation, 12 samples were selected from the Bakken Formation and conducted on a set of experiments including X-ray diffraction mineral analysis (XRD), total organic carbon (TOC), vitrinite reflectance (Ro), and low-temperature nitrogen adsorption experiments. Results showed that the average TOC and Ro of Upper and Lower Bakken shale is 10.72 wt% and 0.86%, respectively. The Bakken Formation develops micropores, mesopores, and macropores. However, the Upper and Lower Bakken shale are dominated by micropores, while the Middle Bakken tight reservoir is dominated by mesopores. The total pore volume and specific surface area of the Middle Bakken are significantly higher than those of the Upper and Lower Bakken, indicating that Middle Bakken is more conducive to the storage of oil and gas. Through analysis, the main controlling factors for the pore structure of the Upper and Lower Bakken shale are TOC and maturity, while those for Middle Bakken are clay and quartz contents

    Data of patient’s age, diagnose time and ultrasound results.

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