378 research outputs found
Electron induced nanoscale engineering of rutile TiO2 surfaces
Electron stimulated modifications of the rutile TiO2(110) surface have been investigated using scanning tunnelling microscopy tip pulses and electron beam irradiation. Tip pulses on the 'as-prepared' surface induce local surface reconstruction and removal of surface hydroxyls in a region around the reconstruction. A defocused beam from an electron gun as well as tip pulses have been used to generate a number of oxygen deficient surfaces. All tip pulse features display an oval profile, which can be attributed to the anisotropic conductivity of the TiO2(110) surface. A novel oxygen deficient phase with well-ordered defective 'nano-cracks' has been identified, which can be produced by either electron beam irradiation or low flash anneal temperatures (~570 K). Annealing such surfaces to moderate temperatures (~850 K) leads to mixed 1 × 1 and 1 × 2 surfaces, until now only achievable by annealing in oxygen or ageing by repeated sputter/anneal cycles. Heating to normal preparation temperatures (1000 K) reforms the clean, well-ordered 1 × 1 surface termination. Our results demonstrate the potential of electron induced processes to modify the oxygen composition and structure of the TiO2(110) surface in a controllable and reversible way for selective surface patterning and surface reactivity modification
Profiling of Substrate Specificities of 3C-Like Proteases from Group 1, 2a, 2b, and 3 Coronaviruses
BACKGROUND: Coronaviruses (CoVs) can be classified into alphacoronavirus (group 1), betacoronavirus (group 2), and gammacoronavirus (group 3) based on diversity of the protein sequences. Their 3C-like protease (3CL(pro)), which catalyzes the proteolytic processing of the polyproteins for viral replication, is a potential target for anti-coronaviral infection. METHODOLOGY/PRINCIPAL FINDINGS: Here, we profiled the substrate specificities of 3CL(pro) from human CoV NL63 (group 1), human CoV OC43 (group 2a), severe acute respiratory syndrome coronavirus (SARS-CoV) (group 2b) and infectious bronchitis virus (IBV) (group 3), by measuring their activity against a substrate library of 19 × 8 of variants with single substitutions at P5 to P3' positions. The results were correlated with structural properties like side chain volume, hydrophobicity, and secondary structure propensities of substituting residues. All 3CL(pro) prefer Gln at P1 position, Leu at P2 position, basic residues at P3 position, small hydrophobic residues at P4 position, and small residues at P1' and P2' positions. Despite 3CL(pro) from different groups of CoVs share many similarities in substrate specificities, differences in substrate specificities were observed at P4 positions, with IBV 3CL(pro) prefers P4-Pro and SARS-CoV 3CL(pro) prefers P4-Val. By combining the most favorable residues at P3 to P5 positions, we identified super-active substrate sequences 'VARLQ↓SGF' that can be cleaved efficiently by all 3CL(pro) with relative activity of 1.7 to 3.2, and 'VPRLQ↓SGF' that can be cleaved specifically by IBV 3CL(pro) with relative activity of 4.3. CONCLUSIONS/SIGNIFICANCE: The comprehensive substrate specificities of 3CL(pro) from each of the group 1, 2a, 2b, and 3 CoVs have been profiled in this study, which may provide insights into a rational design of broad-spectrum peptidomimetic inhibitors targeting the proteases
Nonlinear ultrasonic evaluation of disorderedly clustered pitting damage using an in situ sensor network
Pervasive but insidious, pitting damage—from pitting corrosion in maritime structures through electrical pitting in bearings to debris cloud–induced pitting craters in spacecraft—is a typical modality of material degradation and lesion in engineering assets in harsh service environment. Pitting damage may feature hundreds of clustered, localized craters, cracks, and diverse microscopic defects (e.g. dislocation, micro-voids, and cracks) disorderedly scattered over a wide area. Targeting accurate, holistic evaluation of pitting damage (mainly the existence, location, and size of the pitted area), an insight into the generation of nonlinear features in guided ultrasonic waves (i.e. high-order harmonics) that are triggered by pitting damage, is achieved using a semi-analytical finite element approach, based on which a monotonic correlation between the nonlinear ultrasonic features and the holistic severity of pitting damage is established. With such correlation, a structural health monitoring framework is developed, in conjunction with the use of an in situ sensor network comprising miniaturized piezoelectric wafers, to characterize pitting damage accurately and monitor material deterioration progress continuously. The framework is experimentally validated, in which highly complex pitting damage in a space structure, engendered by a hypervelocity debris cloud, is evaluated precisely
Fabrication of Isolated Iron Nanowires
Nanoscale interconnects are an important component of molecular electronics. Here we use X-ray spectromicroscopy techniques as well as scanning probe methods to explore the self-assembled growth of insulated iron nanowires as a potential means of supplying an earth abundant solution. The intrinsic anisotropy of a TiO2(110) substrate directs the growth of micron length iron wires at elevated temperatures, with a strong metal-support interaction giving rise to ilmenite (FeTiO3) encapsulation. Iron nanoparticles that decorate the nanowires display magnetic properties that suggest other possible applications
A global product of fine-scale urban building height based on spaceborne lidar
Characterizing urban environments with broad coverages and high precision is
more important than ever for achieving the UN's Sustainable Development Goals
(SDGs) as half of the world's populations are living in cities. Urban building
height as a fundamental 3D urban structural feature has far-reaching
applications. However, so far, producing readily available datasets of recent
urban building heights with fine spatial resolutions and global coverages
remains a challenging task. Here, we provide an up-to-date global product of
urban building heights based on a fine grid size of 150 m around 2020 by
combining the spaceborne lidar instrument of GEDI and multi-sourced data
including remotely sensed images (i.e., Landsat-8, Sentinel-2, and Sentinel-1)
and topographic data. Our results revealed that the estimated method of
building height samples based on the GEDI data was effective with 0.78 of
Pearson's r and 3.67 m of RMSE in comparison to the reference data. The mapping
product also demonstrated good performance as indicated by its strong
correlation with the reference data (i.e., Pearson's r = 0.71, RMSE = 4.60 m).
Compared with the currently existing products, our global urban building height
map holds the ability to provide a higher spatial resolution (i.e., 150 m) with
a great level of inherent details about the spatial heterogeneity and
flexibility of updating using the GEDI samples as inputs. This work will boost
future urban studies across many fields including climate, environmental,
ecological, and social sciences
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Extraction System Design for the Bsns/Rcs.
The BSNS extraction system takes use one of the four dispersion-free straight sections. Five vertical kickers and one Lambertson septum magnet are used for the one-turn extraction. The rise time of less 250 ns and the total kicking angle of 20 mrad are required for the kickers that are grouped into two tanks. The design for the kicker magnets and the PFN is also given. To reduce the low beam loss in the extraction channels due to large halo emittance, large apertures are used for both the kickers and septum. Stray magnetic field inside and at the two ends of the circulating path of the Lambertson magnet and its effect to the beam has been studied
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EDN1 Lys198Asn is Associated with Diabetic Retinopathy in Type 2 Diabetes
Purpose: We tested the hypothesis that genetic variants in vasoactive and angiogenic factors regulating the retina vasculature contribute to the development of diabetic retinopathy (DR). Methods: A case-control study was performed to study the genetic association between DR and polymorphic variants of EDN1 (Lys198Asn), LTA (IVS1–80C>A, IVS1–206G>C, IVS1–252>G), eNOS (Glu298Asp), and ITGA2 (BgI II) in a Chinese population with type 2 diabetes mellitus. A well defined population with type 2 diabetes, consisting of 127 controls and 216 DR patients, was recruited. Results: A higher frequency of the Asn/Asn genotype of EDN1 was found in individuals with at least 10 years of diabetes and no retinopathy (controls) compared with DR patients with any duration of diabetes (DR: 2.3%; control: 11.0%; p=0.0002). The Asn allele was also more frequent in controls than DR patients (DR: 16.4%; control: 29.5%; p=0.007). Multiple logistic regression analysis showed that the Asn/Asn genotype was the factor most significantly associated with reduced risk of DR (odds ratio=0.19; 95% CI: 0.07-0.53; p=0.002) and with late onset of diabetes (Asn/Asn: 59 years; Lys/Lys + Lys/Asn: 53 years; p=0.02). Moreover, the Lys/Lys genotype was more common among patients with nonproliferative (75.7%) than proliferative DR (56.9%; p=0.008). The distributions of Lys198Asn alleles in hypertension did not differ from normotensive subjects. No associations between DR and polymorphisms of LTA, eNOS, or ITGA2 were detected, and there were no detectable gene-gene or gene-environmental interactions among the polymorphisms.Conclusions The Asn/Asn genotype of EDN1 was associated with a reduced risk of DR and with delayed onset of type 2 diabetes
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Fabrication of isolated iron nanowires
Nanoscale interconnects are an important component of molecular electronics. Here we use X-ray spectromicroscopy techniques as well as scanning probe methods to explore the self-assembled growth of insulated iron nanowires as a potential means of supplying an earth abundant solution. The intrinsic anisotropy of a TiO2(110) substrate directs the growth of micron length iron wires at elevated temperatures, with a strong metal–support interaction giving rise to ilmenite (FeTiO3) encapsulation. Iron nanoparticles that decorate the nanowires display magnetic properties that suggest other possible applications
Systematic Transcriptome Profiling of hPSC-Derived Osteoblasts Unveils CORIN’s Mastery in Governing Osteogenesis Through CEBPD Modulation
The commitment of stem cells to differentiate into osteoblasts is a highly regulated and complex process that involves the coordination of extrinsic signals and intrinsic transcriptional machinery. While rodent osteoblastic differentiation has been extensively studied, research on human osteogenesis has been limited by cell sources and existing models. Here, we systematically dissect human pluripotent stem cell-derived osteoblasts to identify functional membrane proteins and their downstream transcriptional networks involved in human osteogenesis. Our results reveal an enrichment of type II transmembrane serine protease CORIN in humans but not rodent osteoblasts. Functional analyses demonstrated that CORIN depletion significantly impairs osteogenesis. Genome-wide chromatin immunoprecipitation enrichment and mechanistic studies show that p38 MAPK-mediated CCAAT enhancer binding protein delta (CEBPD) upregulation is required for CORIN-modulated osteogenesis. Contrastingly, the type I transmembrane heparan sulfate proteoglycan SDC1 enriched in mesenchymal stem cells exerts a negative regulatory effect on osteogenesis through a similar mechanism. Chromatin immunoprecipitation-seq, bulk and single-cell transcriptomes, and functional validations indicated that CEBPD plays a critical role in controlling osteogenesis. In summary, our findings uncover previously unrecognized CORIN-mediated CEBPD transcriptomic networks in driving human osteoblast lineage commitment
Reducing spread of COVID-19 in closed environments: an outbreak investigation and modelling study in dormitory settings.
Starting with a handful of SARS-CoV-2 infections in dormitory residents in late March 2020, rapid tranmission in their dense living environments ensued and by October 2020, more than 50,000 acute infections were identified across various dormitories. Extensive epidemiological, serological and phylogentic investigations, supported by simulation models, helped to reveal the factors of transmission and impact of control measures in a dormitory. We find that asymptomatic cases and symptomatic cases who did not seek medical attention were major drivers of the outbreak. Furthermore, each resident has about 30 close contacts and each infected resident spread to 4.4 (IQR 3.5–5.3) others at the start of the outbreak. The final attack rate of the current outbreak was 76.2% (IQR 70.6%–98.0%) and could be reduced by further 10% under a modified dormitory housing condition. These findings are important when designing living environments in a post COVID-19 future to reduce disease spread and facilitate rapid implementation of outbreak control measures
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