Registration of ‘Hallam’ Wheat

‘Hallam’ (Reg. no. CV-983, PI 638790) is a hard red winter wheat (Triticum aestivum L.) cultivar developed cooperatively by the Nebraska Agricultural Experiment Station and the USDA-ARS and released in 2005 by the developing institutions. Hallam was released primarily for its superior adaptation to rainfed wheat production systems in eastern Nebraska. The name Hallam was chosen to honor Hallam, NE, a town and its people rebuilding after a tornado. Hallam was selected from the cross ‘Brule’ (Schmidt et al., 1983)/‘Bennett’ (Schmidt et al., 1981)//‘Niobrara’ (Baenziger et al., 1996) that was made in 1992. The F1 generation was grown in the greenhouse and the F2 to F3 generations were advanced using the bulk breeding method in the field at Mead, NE. In 1995, single F3:4 rows were planted for selection. Hallam was selected in the F4 and there was no further selection thereafter. Hallam was evaluated as NE98471 in Nebraska yield nurseries starting in 1999, in the Northern Regional Performance Nursery in 2001 and 2002, and in Nebraska cultivar performance trials from 2002 to 2004. In the Nebraska cultivar performance trials, it was narrowly adapted and performs best in eastern Nebraska. The average Nebraska rainfed yield of Hallam of 4110 kg ha-1 (41 environments from 2002 to 2004) was greater than the yields of ‘Wahoo’ (4030 kg ha-1; Baenziger et al., 2002), ‘Alliance’ (3880 kg ha-1; Baenziger et al., 1995), and ‘Harry’ (4000 kg ha-1; Baenziger et al., 2004b), but was lower than ‘Millennium’ (4180 kg ha-1; Baenziger et al., 2001) and ‘Wesley’ (4210 kg ha-1; Peterson et al., 2001). In its primary area of adaptation (eastern Nebraska), Hallam has yielded 4540 kg ha-1 (five environments), which was greater than Wesley (4150 kg ha-1), Millennium (4250 kg ha-1), Wahoo (3940 kg ha-1), and Alliance (3900 kg ha21). In the Northern Regional Performance Nursery, Hallam ranked 14th of 30 in 2001 (12 environments) and fourth of 25 entries in 2002 (13 environments) and averaged 100 kg ha-1 more grain yield than ‘Nekota’ (Haley et al., 1996). Hallam is not recommended for use in irrigated production systems where other wheat cultivars with superior performance, especially with better straw strength (described below), would be recommended. Other measurements of performance from comparison trials show that Hallam is moderately early in maturity (142 d after January 1, five environments), about 2.5 d and 1.2 d earlier flowering than Millennium and Wesley, respectively. Hallam is a semidwarf wheat cultivar. Hallam has a medium short coleoptile (46 mm), as expected for a semidwarf wheat cultivar, and is shorter than ‘Goodstreak’ (61 mm; Baenziger et al., 2004a) and slightly longer than semidwarf wheat cultivars such as Harry (36 mm). The mature plant height of Hallam (86 cm) is 3 cm shorter than Millennium and 6 cm taller than Wesley (41 environments). Hallam has moderate straw strength (45% lodged), similar to Wahoo (46% lodged), but worse than Wesley (34% lodged) in those environments (3) where severe lodging was found. The winter hardiness of Hallamis good to very good, similar to ‘Abilene’ (PI 511307) and comparable to other winter wheat cultivars adapted and commonly grown in Nebraska

Registration of ‘Hallam’ Wheat

‘Hallam’ (Reg. no. CV-983, PI 638790) is a hard red winter wheat (Triticum aestivum L.) cultivar developed cooperatively by the Nebraska Agricultural Experiment Station and the USDA-ARS and released in 2005 by the developing institutions. Hallam was released primarily for its superior adaptation to rainfed wheat production systems in eastern Nebraska. The name Hallam was chosen to honor Hallam, NE, a town and its people rebuilding after a tornado. Hallam was selected from the cross ‘Brule’ (Schmidt et al., 1983)/‘Bennett’ (Schmidt et al., 1981)//‘Niobrara’ (Baenziger et al., 1996) that was made in 1992. The F1 generation was grown in the greenhouse and the F2 to F3 generations were advanced using the bulk breeding method in the field at Mead, NE. In 1995, single F3:4 rows were planted for selection. Hallam was selected in the F4 and there was no further selection thereafter. Hallam was evaluated as NE98471 in Nebraska yield nurseries starting in 1999, in the Northern Regional Performance Nursery in 2001 and 2002, and in Nebraska cultivar performance trials from 2002 to 2004. In the Nebraska cultivar performance trials, it was narrowly adapted and performs best in eastern Nebraska. The average Nebraska rainfed yield of Hallam of 4110 kg ha-1 (41 environments from 2002 to 2004) was greater than the yields of ‘Wahoo’ (4030 kg ha-1; Baenziger et al., 2002), ‘Alliance’ (3880 kg ha-1; Baenziger et al., 1995), and ‘Harry’ (4000 kg ha-1; Baenziger et al., 2004b), but was lower than ‘Millennium’ (4180 kg ha-1; Baenziger et al., 2001) and ‘Wesley’ (4210 kg ha-1; Peterson et al., 2001). In its primary area of adaptation (eastern Nebraska), Hallam has yielded 4540 kg ha-1 (five environments), which was greater than Wesley (4150 kg ha-1), Millennium (4250 kg ha-1), Wahoo (3940 kg ha-1), and Alliance (3900 kg ha21). In the Northern Regional Performance Nursery, Hallam ranked 14th of 30 in 2001 (12 environments) and fourth of 25 entries in 2002 (13 environments) and averaged 100 kg ha-1 more grain yield than ‘Nekota’ (Haley et al., 1996). Hallam is not recommended for use in irrigated production systems where other wheat cultivars with superior performance, especially with better straw strength (described below), would be recommended. Other measurements of performance from comparison trials show that Hallam is moderately early in maturity (142 d after January 1, five environments), about 2.5 d and 1.2 d earlier flowering than Millennium and Wesley, respectively. Hallam is a semidwarf wheat cultivar. Hallam has a medium short coleoptile (46 mm), as expected for a semidwarf wheat cultivar, and is shorter than ‘Goodstreak’ (61 mm; Baenziger et al., 2004a) and slightly longer than semidwarf wheat cultivars such as Harry (36 mm). The mature plant height of Hallam (86 cm) is 3 cm shorter than Millennium and 6 cm taller than Wesley (41 environments). Hallam has moderate straw strength (45% lodged), similar to Wahoo (46% lodged), but worse than Wesley (34% lodged) in those environments (3) where severe lodging was found. The winter hardiness of Hallamis good to very good, similar to ‘Abilene’ (PI 511307) and comparable to other winter wheat cultivars adapted and commonly grown in Nebraska

MutDB: update on development of tools for the biochemical analysis of genetic variation

Understanding how genetic variation affects the molecular function of gene products is an emergent area of bioinformatic research. Here, we present updates to MutDB (http://www.mutdb.org), a tool aiming to aid bioinformatic studies by integrating publicly available databases of human genetic variation with molecular features and clinical phenotype data. MutDB, first developed in 2002, integrates annotated SNPs in dbSNP and amino acid substitutions in Swiss-Prot with protein structural information, links to scores that predict functional disruption and other useful annotations. Though these functional annotations are mainly focused on nonsynonymous SNPs, some information on other SNP types included in dbSNP is also provided. Additionally, we have developed a new functionality that facilitates KEGG pathway visualization of genes containing SNPs and a SNP query tool for visualizing and exporting sets of SNPs that share selected features based on certain filters

Gene transfer into hepatocytes using asialoglycoprotein receptor mediated endocytosis of DNA complexed with an artificial tetra-antennary galactose ligand

We have constructed an artificial ligand for the hepatocyte-specific asialoglycoprotein receptor for the purpose of generating a synthetic delivery system for DNA. This ligand has a tetra-antennary structure, containing four terminal galactose residues on a branched carrier peptide. The carbohydrate residues of this glycopeptide were introduced by reductive coupling of lactose to the alpha- and epsilon-amino groups of the two N-terminal lysines on the carrier peptide. The C-terminus of the peptide, containing a cysteine separated from the branched N-terminus by a 10 amino acid spacer sequence, was used for conjugation to 3-(2-pyridyldithio)propionate-modified polylysine via disulfide bond formation. Complexes containing plasmid DNA bound to these galactose-polylysine conjugates have been used for asialoglycoprotein receptor-mediated transfer of a luciferase gene into human (HepG2) and murine (BNL CL.2) hepatocyte cell lines. Gene transfer was strongly promoted when amphipathic peptides with pH-controlled membrane-disruption activity, derived from the N-terminal sequence of influenza virus hemagglutinin HA-2, were also present in these DNA complexes. Thus, we have essentially borrowed the small functional domains of two large proteins, asialoglycoprotein and hemagglutinin, and assembled them into a supramolecular complex to generate an efficient gene-transfer system

Registration of ‘NH03614 CL’ Wheat

‘NH03614 CL’ (Reg. No. CV-1051, PI 653833) hard red winter wheat (Triticum aestivum L.) was developed cooperatively by the Nebraska Agricultural Experiment Station and the USDA-ARS and released in 2008 by the developing institutions and the South Dakota Agricultural Experiment Station and the Wyoming Agricultural Experiment Station. In addition to researchers at the releasing institutions, USDA-ARS researchers at Manhattan, KS and St. Paul, MN participated in the development of NH03614 CL. NH03614 CL was selected from the cross ‘Wesley’ sib//‘Millennium’ sib/‘Above’ sib that was made in the spring of 1997 to develop new herbicide-tolerant cultivars. NH03614 CL was selected using the bulk breeding method as an F3:4 line (F3–derived line in the F4 generation) in 2001, and in 2003 was assigned experimental line number NH03164. NH03614 CL was released primarily for its herbicide tolerance to imadazolinone compounds which control many previously diffi cult-to-control weeds in wheat production systems, and for its superior adaptation to rainfed wheat production systems in Nebraska, Wyoming, South Dakota, and counties in adjacent states

Perspectives on Low Temperature Tolerance and Vernalization Sensitivity in Barley: Prospects for Facultative Growth Habit

[EN] One option to achieving greater resiliency for barley production in the face of climate change is to explore the potential of winter and facultative growth habits: for both types, low temperature tolerance (LTT) and vernalization sensitivity are key traits. Sensitivity to short-day photoperiod is a desirable attribute for facultative types. In order to broaden our understanding of the genetics of these phenotypes, we mapped quantitative trait loci (QTLs) and identified candidate genes using a genome-wide association studies (GWAS) panel composed of 882 barley accessions that was genotyped with the Illumina 9K single-nucleotide polymorphism (SNP) chip. Fifteen loci including 5 known and 10 novel QTL/genes were identified for LTT—assessed as winter survival in 10 field tests and mapped using a GWAS meta-analysis. FR-H1, FR-H2, and FR-H3 were major drivers of LTT, and candidate genes were identified for FR-H3. The principal determinants of vernalization sensitivity were VRN-H1, VRN-H2, and PPD-H1. VRN-H2 deletions conferred insensitive or intermediate sensitivity to vernalization. A subset of accessions with maximum LTT were identified as a resource for allele mining and further characterization. Facultative types comprised a small portion of the GWAS panel but may be useful for developing germplasm with this growth habitSISupport was provided by the USDA-NIFA TCAP Project no. 2011-68002-3002

Indiana Medical Resident’s Knowledge of Surrogate Decision Making Laws

Introduction During the care of incapacitated patients, physicians, and medical residents discuss treatment options and gain consent to treat through healthcare surrogates. The purpose of this study is to ascertain medical residents’ knowledge of healthcare consent laws, application during clinical practice, and appraise the education residents received regarding surrogate decision making laws. Methods Beginning in February of 2018, 35 of 113 medical residents working with patients within Indiana completed a survey. The survey explored medical residents’ knowledge of health care surrogate consent laws utilized in Indiana hospitals and Veterans Affairs (VA) hospitals via clinical vignettes. Results Only 22.9% of medical residents knew the default state law in Indiana did not have a hierarchy for settling disputes among surrogates. Medical residents correctly identified which family members could participate in medical decisions 86% of the time. Under the Veterans Affairs surrogate law, medical residents correctly identified appropriate family members or friends 50% of the time and incorrectly acknowledged the chief decision makers during a dispute 30% of the time. All medical residents report only having little or some knowledge of surrogate decision making laws with only 43% having remembered receiving surrogate decision making training during their residency. Conclusions These findings demonstrate that medical residents lack understanding of surrogate decision making laws. In order to ensure medical decisions are made by the appropriate surrogates and patient autonomy is upheld, an educational intervention is required to train medical residents about surrogate decision making laws and how they are used in clinical practice