Disease association mapping in Drosophila can be replicated in the wild

Association and linkage mapping have become important tools in understanding the genetics of complex traits, including diseases in humans. As the success of association mapping is reduced by small effect sizes and limited power, linkage studies in laboratory-based model systems are still heavily used. But whether the results of these studies can be replicated in natural populations has been questioned. Here, we show that a polymorphism in the gene ref(2)P, which had previously been linked to sigma virus resistance in Drosophila melanogaster under laboratory conditions, also provides resistance against the virus in female flies in a wild population in the field. This genetic association is thus upheld in spite of a known genotype-by-genotype interaction and environmental variation

Identifying appropriate methodology to diagnose aeration limitations with large peat and bark particles in growing media

Large-sized particles (coarse peat, bark or sawdust) are often added to growing media to improve substrate aeration properties (gas storage and exchange). Recent studies have shown that large fragments mixed with fines may create barriers that restrict gas diffusion or create competition for oxygen even if they improve air storage. An experiment was carried out to compare the growth performances of growing media containing large fragments and to assess their aeration status using different methods. Different mixes were made of a fine sphagnum peat (average size 2.4 mm) and a coarse (1-2, 2-4, 4-6, 6-10, and 10-20 mm particles) sphagnum peat or bark (2-4 and 10-20 mm). These substrates had different aeration properties and were used to grow Poinsettia and Impatiens ‘New Guinea’ in a greenhouse, resulting in differences in plant growth. The results show that air-filled porosity remained relatively unaffected by fragment size. Gas relative diffusivity differed significantly between treatments and was highest in the mix with the 2-4 mm particles and diminished rapidly as fragment size increased from 4 to 20 mm or decreased to 1-2 mm. Diffusivity was clearly lower in the bark/peat mixes but showed the same trend with coarse fragments. Root and shoot growth parameters were significantly and positively correlated to gas relative diffusivity. Moreover, the growth reduction observed in the bark/peat mixes relative to pure peat was most likely linked to limited gas exchange. Air-filled porosity assessments performed in situ (in the pot itself) or prior to potting, in cylinders, gave inconsistent results or were not significantly correlated to plant growth, indicating that aeration limitations are better diagnosed with gas diffusivity in growing media

Physics of wind instruments an overview of studies carried out at LMA

International audienceA poster is presented with the aim of doing an overview of the research activities carried out on the physics of wind instruments at the Laboratory of Mechanics and Acoustic

Average mass of seeds encountered by foraging dabbling ducks in Western Europe

Many dabbling ducks Anas spp. are largely granivorous, consuming a variety of seeds chiefly from aquatic plants. To assess the relative value and carrying capacity of wetlands for dabbling ducks, species-specific information about seed mass is needed, but it is still largely missing or scattered in the literature. By combining weights of seeds collected in the field with a literature review, we provide a reference table for seed mass of 200 western European plant taxa frequently encountered by foraging dabbling ducks. Seeds collected in the field were sampled in microhabitats and at depths at which ducks were observed to forage, and study sites represent wintering, staging as well as breeding areas within a flyway in western Europe. When combined with calorimetric data, the present reference table will aid managers and scientists in assessing the importance of seed food resources at different sites and during different parts of the annual cycle.</p

Idealized digital models for conical reed instruments, with focus on the internal pressure waveform

International audienceTwo models for the generation of self-oscillations of reed conical woodwinds are presented. They use the fewest parameters (of either the resonator or the ex-citer), whose influence can be quickly explored. The formulation extends iterated maps obtained for loss-less cylindrical pipes without reed dynamics. It uses spherical wave variables in idealized resonators, with one parameter more than for cylinders: the missing length of the cone. The mouthpiece volume equals that of the missing part of the cone, and is implemented as either a cylindrical pipe (first model) or a lumped element (second model). Only the first model adds a length parameter for the mouthpiece and leads to the solving of an implicit equation. For the second model, any shape of nonlinear characteristic can be directly considered. The complex characteristics impedance for spherical waves requires sampling times smaller than a round trip in the resonator. The convergence of the two models is shown when the length of the cylindrical mouthpiece tends to zero. The waveform is in semi-quantitative agreement with experiment. It is concluded that the oscillations of the positive episode of the mouthpiece pressure are related to the length of the missing part, not to the reed dynamics

Contribution to harmonic balance calculations of self-sustained periodic oscillations with focus on single-reed instruments

International audienceThe harmonic balance method ͑HBM͒ was originally developed for finding periodic solutions of electronical and mechanical systems under a periodic force, but has been adapted to self-sustained musical instruments. Unlike time-domain methods, this frequency-domain method does not capture transients and so is not adapted for sound synthesis. However, its independence of time makes it very useful for studying any periodic solution, whether stable or unstable, without care of particular initial conditions in time. A computer program for solving general problems involving nonlinearly coupled exciter and resonator, HARMBAL, has been developed based on the HBM. The method as well as convergence improvements and continuation facilities are thoroughly presented and discussed in the present paper. Applications of the method are demonstrated, especially on problems with severe difficulties of convergence: the Helmholtz motion ͑square signals͒ of single-reed instruments when no losses are taken into account, the reed being modeled as a simple spring

Spread of Avian Influenza Viruses by Common Teal (Anas crecca) in Europe

Since the recent spread of highly pathogenic (HP) H5N1 subtypes, avian influenza virus (AIV) dispersal has become an increasing focus of research. As for any other bird-borne pathogen, dispersal of these viruses is related to local and migratory movements of their hosts. In this study, we investigated potential AIV spread by Common Teal (Anas crecca) from the Camargue area, in the South of France, across Europe. Based on bird-ring recoveries, local duck population sizes and prevalence of infection with these viruses, we built an individual-based spatially explicit model describing bird movements, both locally (between wintering areas) and at the flyway scale. We investigated the effects of viral excretion duration and inactivation rate in water by simulating AIV spread with varying values for these two parameters. The results indicate that an efficient AIV dispersal in space is possible only for excretion durations longer than 7 days. Virus inactivation rate in the environment appears as a key parameter in the model because it allows local persistence of AIV over several months, the interval between two migratory periods. Virus persistence in water thus represents an important component of contamination risk as ducks migrate along their flyway. Based on the present modelling exercise, we also argue that HP H5N1 AIV is unlikely to be efficiently spread by Common Teal dispersal only