The performance of fiber reinforcement in completely decomposed granite

Adding discrete fibers to soils can improve their strength; however, fiber reinforcement remains scarce in practice. Previous studies on the performance of soils reinforced with discrete fibers consist mainly of laboratory studies with either clay or, most often, uniform sand as the host soil, so there is a lack of data on other types of soils such as weathered soils, which tend to be well graded. Unlike uniform soils, which are generally dilative, well-graded soils usually show a contractive behavior. This study examines the effect of adding fibers to a completely decomposed granite (CDG) typical of many residual soils, which has the characteristics to be sensitive to material and sample preparation and also to be compressive during shearing. It is found that adding discrete fibers to the CDG homogenizes it because the reinforced soil is not sensitive to the method of material or sample preparation. It is also found that, despite its compressive nature, fibers mobilize extra strength compared with the unreinforced soil, and this effect does not reduce at large confining stresses. Adding discrete fibers to soils can improve their strength; however, fiber reinforcement remains scarce in practice. Previous studies on the performance of soils reinforced with discrete fibers consist mainly of laboratory studies with either clay or, most often, uniform sand as the host soil, so there is a lack of data on other types of soils such as weathered soils, which tend to be well graded. Unlike uniform soils, which are generally dilative, well-graded soils usually show a contractive behavior. This study examines the effect of adding fibers to a completely decomposed granite (CDG) typical of many residual soils, which has the characteristics to be sensitive to material and sample preparation and also to be compressive during shearing. It is found that adding discrete fibers to the CDG homogenizes it because the reinforced soil is not sensitive to the method of material or sample preparation. It is also found that, despite its compressive nature, fibers mobilize extra strength compared with the unreinforced soil, and this effect does not reduce at large confining stresses

Incorporação das propriedades rotâmeros e ocupância em métodos de análise estrutural de proteínas.

Conformação das cadeias laterais (rotâmeros); Dupla ocupância; Java Protein Dossier.bitstream/CNPTIA/9893/1/comuntec34.pdfAcesso em: 30 maio 2008

Curvatura da superfície de proteínas no Java Protein Dossier.

Definição de superfície. Cálculo dos valores de curvatura com SurfRace.bitstream/CNPTIA/9897/1/comuntec38.pdfAcesso em: 30 maio 2008

Apresentação gráfica de parâmetros protéicos utilizando o Java Protein Dossier.

Parâmetros apresentados pelo JPD. Sequência de resíduos. Contatos. Contatos internos. Contatos na interface. Estrutura secundária. Dupla ocupância. Fator de temperatura. Entropia relativa. Confiabilidade. Acessibilidade de resíduos. Ângulos de torsão. Potencial eletrostático. Curvatura na superfície. Hidrofobicidade. Analisando com maior detalhes os parâmetros apresentados.bitstream/CNPTIA/9899/1/comuntec40.pdfAcesso em: 30 maio 2008

Análise do grau de conservação de resíduos em proteínas com estrutura 3D resolvida utilizando o SMS.

HSSP e entropia relativa. Módulos do SMS para análise de conservação. Discussão e trabalhos futuros.bitstream/CNPTIA/9896/1/comuntec37.pdfAcesso em: 30 maio 2008

Utilização do software GRASP para gerar arquivo de coordenadas com valores de potencial eletrostático.

Com o intuito de disponibilizar um banco de dados de valores de potencial eletrostático para todas as estruturas de proteínas depositadas no PDB, foi utilizado o programa GRASP (Graphical Representation and Analysis of Structural Properties) (Nicholls et al., 1991) para geração deste banco de dados.bitstream/CNPTIA/9883/1/comuntec24.pdfAcesso em: 30 maio 2008

Cophylogeny reconstruction via an approximate bayesian computation

Despite an increasingly vast literature on cophylogenetic reconstructions for studying host-parasite associations, understanding the common evolutionary history of such systems remains a problem that is far from being solved. Most algorithms for host-parasite reconciliation use an event-based model, where the events include in general (a subset of) cospeciation, duplication, loss, and host switch. All known parsimonious event-based methods then assign a cost to each type of event in order to find a reconstruction of minimum cost. The main problem with this approach is that the cost of the events strongly influences the reconciliation obtained. Some earlier approaches attempt to avoid this problem by finding a Pareto set of solutions and hence by considering event costs under some minimization constraints. To deal with this problem, we developed an algorithm, called Coala, for estimating the frequency of the events based on an approximate Bayesian computation approach. The benefits of this method are 2-fold: (i) it provides more confidence in the set of costs to be used in a reconciliation, and (ii) it allows estimation of the frequency of the events in cases where the data set consists of trees with a large number of taxa. We evaluate our method on simulated and on biological data sets. We show that in both cases, for the same pair of host and parasite trees, different sets of frequencies for the events lead to equally probable solutions. Moreover, often these solutions differ greatly in terms of the number of inferred events. It appears crucial to take this into account before attempting any further biological interpretation of such reconciliations. More generally, we also show that the set of frequencies can vary widely depending on the input host and parasite trees. Indiscriminately applying a standard vector of costs may thus not be a good strategy

Probing quantum and classical turbulence analogy through global bifurcations in a von K\'arm\'an liquid Helium experiment

We report measurements of the dissipation in the Superfluid Helium high REynold number von Karman flow (SHREK) experiment for different forcing conditions, through a regime of global hysteretic bifurcation. Our macroscopical measurements indicate no noticeable difference between the classical fluid and the superfluid regimes, thereby providing evidence of the same dissipative anomaly and response to asymmetry in fluid and superfluid regime. %In the latter case, A detailed study of the variations of the hysteretic cycle with Reynolds number supports the idea that (i) the stability of the bifurcated states of classical turbulence in this closed flow is partly governed by the dissipative scales and (ii) the normal and the superfluid component at these temperatures (1.6K) are locked down to the dissipative length scale.Comment: 5 pages, 5 figure