Non invasive detection and localization of microplastic particles in a sandy sediment by complementary neutron and X ray tomography

PURPOSE: Microplastics have become a ubiquitous pollutant in marine, terrestrial and freshwater systems that seriously affects aquatic and terrestrial ecosystems. Common methods for analysing microplastic abundance in soil or sediments are based on destructive sampling or involve destructive sample processing. Thus, substantial information about local distribution of microplastics is inevitably lost. METHODS: Tomographic methods have been explored in our study as they can help to overcome this limitation because they allow the analysis of the sample structure while maintaining its integrity. However, this capability has not yet been exploited for detection of environmental microplastics. We present a bimodal 3D imaging approach capable to detect microplastics in soil or sediment cores non-destructively. RESULTS: In a first pilot study, we demonstrate the unique potential of neutrons to sense and localize microplastic particles in sandy sediment. The complementary application of X-rays allows mineral grains to be discriminated from microplastic particles. Additionally, it yields detailed information on the 3D surroundings of each microplastic particle, which supports its size and shape determination. CONCLUSION: The procedure we developed is able to identify microplastic particles with diameters of approximately 1 mm in a sandy soil. It also allows characterisation of the shape of the microplastic particles as well as the microstructure of the soil and sediment sample as depositional background information. Transferring this approach to environmental samples presents the opportunity to gain insights of the exact distribution of microplastics as well as their past deposition, deterioration and translocation processes

Capturing 3D Water Flow in Rooted Soil by Ultra fast Neutron Tomography

AbstractWater infiltration in soil is not only affected by the inherent heterogeneities of soil, but even more by the interaction with plant roots and their water uptake. Neutron tomography is a unique non-invasive 3D tool to visualize plant root systems together with the soil water distribution in situ. So far, acquisition times in the range of hours have been the major limitation for imaging 3D water dynamics. Implementing an alternative acquisition procedure we boosted the speed of acquisition capturing an entire tomogram within 10 s. This allows, for the first time, tracking of a water front ascending in a rooted soil column upon infiltration of deuterated water time-resolved in 3D. Image quality and resolution could be sustained to a level allowing for capturing the root system in high detail. Good signal-to-noise ratio and contrast were the key to visualize dynamic changes in water content and to localize the root uptake. We demonstrated the ability of ultra-fast tomography to quantitatively image quick changes of water content in the rhizosphere and outlined the value of such imaging data for 3D water uptake modelling. The presented method paves the way for time-resolved studies of various 3D flow and transport phenomena in porous systems.</jats:p

Neutron computed laminography yields 3D root system architecture and complements investigations of spatiotemporal rhizosphere patterns

Purpose Root growth, respiration, water uptake as well as root exudation induce biogeochemical patterns in the rhizosphere that can change dynamically over time. Our aim is to develop a method that provides complementary information on 3D root system architecture and biogeochemical gradients around the roots needed for the quantitative description of rhizosphere processes. Methods We captured for the first time the root system architecture of maize plants grown in rectangular rhizotrons in 3D using neutron computed laminography NCL . Simultaneously, we measured pH and oxygen concentration using fluorescent optodes and the 2D soil water distribution by means of neutron radiography. We co registered the 3D laminography data with the 2D oxygen and pH maps to analyze the sensor signal as a function of the distance between the roots and the optode. Results The 3D root system architecture was successfully segmented from the laminographic data. We found that exudation of roots in up to 2 mm distance to the pH optode induced patterns of local idification or alkalization. Over time, oxygen gradients in the rhizosphere emerged for roots up to a distance of 7.5 mm. Conclusion Neutron computed laminography allows for a three dimensional investigation of root systems grown in laterally extended rhizotrons as the ones designed for 2D optode imaging studies. The 3D information on root position within the rhizotrons derived by NCL explained measured 2D oxygen and pH distribution. The presented new combination of 3D and 2D imaging methods facilitates systematical investigations of a wide range of dynamic processes in the rhizospher

Three dimensional in vivo analysis of water uptake and translocation in maize roots by fast neutron tomography

Root water uptake is an essential process for terrestrial plants that strongly affects the spatiotemporal distribution of water in vegetated soil. Fast neutron tomography is a recently established non invasive imaging technique capable to capture the 3D architecture of root systems in situ and even allows for tracking of three dimensional water flow in soil and roots. We present an in vivo analysis of local water uptake and transport by roots of soil grown maize plants for the first time measured in a three dimensional time resolved manner. Using deuterated water as tracer in infiltration experiments, we visualized soil imbibition, local root uptake, and tracked the transport of deuterated water throughout the fibrous root system for a day and night situation. This revealed significant differences in water transport between different root types. The primary root was the preferred water transport path in the 13 days old plants while seminal roots of comparable size and length contributed little to plant water supply. The results underline the unique potential of fast neutron tomography to provide time resolved 3D in vivo information on the water uptake and transport dynamics of plant root systems, thus contributing to a better understanding of the complex interactions of plant, soil and wate

Combining Neutron and Magnetic Resonance Imaging to Study the Interaction of Plant Roots and Soil

AbstractThe soil in direct vicinity of the roots, the root-soil interface or so called rhizosphere, is heavily modified by the activity of roots, compared to bulk soil, e.g. in respect to microbiology and soil chemistry. It has turned out that the root-soil interface, though small in size, also plays a decisive role in the hydraulics controlling the water flow from bulk soil into the roots. A promising approach for the non-invasive investigation of water dynamics, water flow and solute transport is the combination of the two imaging techniques magnetic resonance imaging (MRI) and neutron imaging (NI). Both methods are complementary, because NI maps the total proton density, possibly amplified by NI tracers, which usually corresponds to total water content, and is able to detect changes and spatial patterns with high resolution. On the other side, nuclear magnetic resonance relaxation times reflect the interaction between fluid and matrix, while also a mapping of proton spin density and thus water content is possible. Therefore MRI is able to classify different water pools via their relaxation times additionally to the water distribution inside soil as a porous medium. We have started such combined measurements with the approach to use the same samples and perform tomography with each imaging method at different location and short-term sample transfer

Track A Basic Science

Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/138319/1/jia218438.pd

A scaling approach for the assessment of biomass changes and rainfall interception using cosmic-ray neutron sensing

Cosmic-Ray neutron sensing (CRS) is a unique approach to measure soil moisture at field scale filling the gap of current methodologies. However, CRS signal is affected by all the hydrogen pools on the land surface and understanding their relative importance plays an important role for the application of the method e.g., validation of remote sensing products and data assimilation. In this study, a soil moisture scaling approach is proposed to estimate directly the correct CRS soil moisture based on the soil moisture profile measured at least in one position within the field. The approach has the advantage to avoid the need to introduce one correction for each hydrogen contribution and to estimate indirectly all the related time-varying hydrogen pools. Based on the data collected in three crop seasons, the scaling approach shows its ability to identify and to quantify the seasonal biomass water equivalent. Additionally, the analysis conducted at sub-daily time resolution is able to quantify the daily vertical redistribution of the water biomass and the rainfall interception, showing promising applications of the CRS method also for these types of measurements. Overall, the study underlines how not only soil moisture but all the specific hydrological processes in the soil-plant-atmosphere continuum should be considered for a proper evaluation of the CRS signal. For this scope, the scaling approach reveals to be a simple and pragmatic analysis that can be easily extended to other experimental sites

Inverse modelling of cosmic-ray soil moisture for field-scale soil hydraulic parameters

Summary: We used inverse modelling techniques and soil moisture measured by the cosmic-ray neutron sensing (CRS) to estimate root-zone soil hydraulic properties at the field scale. A HYDRUS-1D model was developed for inverse modelling and calibrated with parameter estimation software (PEST) using a global optimizer. Integral CRS measurements recorded from a sunflower farm in Germany comprised the model input. Data were transformed to soil water storage to enable direct model calibration with a HYDRUS soil-water balance. Effective properties at the CRS scale were compared against local measurements and other inversely estimated soil properties from independent soil moisture profiles. Moreover, CRS-scale soil properties were tested on the basis of how field soil moisture (vertical distribution) and soil water storage were reproduced. This framework provided good estimates of effective soil properties at the CRS scale. Simulated soil moisture at different depths at the CRS scale agreed with field observations. Moreover, simulated soil water storage at the CRS scale compared well with calculations from point-scale profiles, despite their different support volumes. The CRS-scale soil properties estimated with the inverse model were within the range of variation of properties identified from all inverse simulations at the local scale. This study demonstrates the potential of CRS for inverse estimation of soil hydraulic properties

Advantages of using adaptive remeshing and parallel processing for modelling biodegradation in groundwater

Biodegrading plumes in groundwater are often typified by relatively reactive zones around the fringes and less reactive zones in the core. A high degree of refinement is required at the fringes if a model is to be of use in improving the conceptual understanding of plumes. Two strategies for dealing with the potentially high computational demands are (i) parallel processing, where the workload is shared between multiple processors, and (ii) locally adaptive remeshing, where a refined area of the grid tracks the moving plume fringes through the domain. The partial differential equation toolbox, UG (Unstructured Grids) offers advanced numerical tools including adaptive remeshing, sparse matrix storage schemes, and multigrid solvers. It embraces many of these features within a parallel processing environment. This paper reports on a recent development of UG to simulate field scale reactive biogeochemistry including Monod kinetics, NAPL dissolution, mineral precipitation/dissolution and ion exchange. The non-linear multicomponent reactive transport system is solved with the fully coupled method. Test cases have been used for verification of the new capability. The paper illustrates an application to a 3D field site. It is demonstrated that both adaptive remeshing and parallel processing can improve efficiency and in turn facilitate the incorporation of a more complex set of species and reactions such that understanding of plume processes is enhanced