Multiple antibiotic resistant index and detection of qnrS and qnrB genes in bacterial consortium of urine samples from clinical settings

The multiple antibiotic resistant (MAR) index and detection of resistant genes in the bacterial consortium of urine samples collected from University of Medical Sciences Teaching Hospital, Akure (UNIMEDTH) was evaluated with all microbiological and biotechnological techniques employed utilizing specified standards in this study. Escherichia coli had the highest bacterial count (311.50 ± 0.707 CFU/ml) while Staphylococcus saprophyticus had the least (13.00 ± 2.828 CFU/ml). Enterococcus faecalis, and Pseudomonas aeruginosa isolate showed marked resistance against four classes of antibiotics tested. The MAR index of bacterial isolates ranged from 0.5 to 1.0. Fluoroquinolone-resistant P. aeruginosa identified to be P. aeruginosa via 16S rDNA analysis sequence analysis of 417 base pairs with strain mcbay1 deposited in GenBank with accession number MT423976 was positive for qnrS resistant gene. E. faecalis identified by 16S rRNA sequence analysis of 264 bp of the strain mcbay 2 deposited in GenBank with accession number MT423977 was also positive for qnrB resistant gene. The presence of resistant genes in ciprofloxacin-resistant P. aeruginosa and quinolone-resistant E. faecalis in urine samples further emphasized the need for the regulation of over-the-counter prescription and antibiotic susceptibility survey of anti-pseudomonal and anti-enterococcal quinolones in hospital settings. http://dx.doi.org/10.5281/zenodo.430431

Antibiotic sensitivity of bacteria associated with selected waste dumpsites in Akure, Nigeria

A study was carried out to determine the antibiotic sensitivity pattern of bacteria isolates associated with selected waste dumpsites in Akure metropolis, Nigeria. Results revealed that the total plate count of bacteria ranged from 1.3×105 cfu/g to 3.0×106 cfu/g. Bacillus subtilis, Pseudomonas aeruginosa, Staphylococcus aureus, Salmonella typhi, Streptococcus faecalis, Shigella dysenteriae, Escherichia coli, Micrococcus luteus, Serratia marcescens, Clostridium botulinum were the isolated bacterial species. The temperature and pH values ranged from 26˚C to 28˚C and 5.68 to 6.48 respectively. Pseudomonas aeruginosa and Serratia showed susceptibility to antibiotics while Micrococcus luteus exhibited resistance to the antibiotics. Some of these isolated bacteria are pathogenic and thus, poses potential threat to the local inhabitant of the area. Therefore, proper waste management practices must be put in place to avoid environmental health hazards. Keywords: bacteria, dumpsites, antibiotic, waste management, environmental healt

Effect of some physicochemical parameters on the decay rate of enteric bacteria isolated from River Owena, Nigeria

Abstract The significance of water in public health cannot be overemphasized. In Nigeria, many people living along the courses of water bodies still source and drink from the rivers and streams. There is, therefore, the need to determine the load of contamination and effect of pH and salinity on the decay rate of enteric bacteria in water samples from River Owena, Owena, Nigeria, in order to develop adequate water quality management. Water samples from River Owena were collected from three sampling points (inflow, middle course and the outflow) along the River Owena, Nigeria. The load of enteric bacteria in the water samples was enumerated using membrane filtration technique. The physicochemical parameters of the water samples were determined using standard methods. The incidence and prevalence of gastroenteritis in the community around River Owena was determined using a structured questionnaire. Microcosm studies were used to determine the decay rate of enteric bacteria at varying salinity and pH. Canonical correlation analysis was used to describe the relationship between the load of enteric bacteria and the incidence and prevalence of gastroenteritis in the community around River Owena. The incidence and prevalence of gastroenteritis in the community around River Owena were estimated to be 0.75 and 0.51, respectively. Escherichia coli had positive relationships with incidence (r = 0.76) and prevalence (r = 0.65). Similarly, faecal coliforms had positive relationships with incidence (r = 0.82) and prevalence of gastroenteritis (r = 0.67), while enterococci showed positive relationship with incidence (r = 0.59) and prevalence of gastroenteritis (r = 0.87). Increase in pH and salinity increased the decay rate of enteric bacteria thereby reducing the growth of enteric bacteria, the optimum pH for the growth and survival of enteric bacteria ranged between pH 5.0 and pH 7.0. The optimum salinity for the growth of enteric bacteria isolated in water samples from River Owena ranged between 10 and 50% salinity. Findings revealed high levels of faecal contamination at the different representative monitoring points on River Owena, pH and salinity influenced the load and decay rate of enteric bacteria in water from River Owena

Sanitary inspection and microbial health risks associated with enteric bacteria in groundwater sources in Ilara-Mokin and Ibule-Soro, Nigeria

This study set out to determine the sanitary risk scores and microbial health risks associated with wells and boreholes in Ilara-Mokin and Ibule-Soro, Nigeria. Water samples (n = 96) were collected over a period of five months to determine the levels of enteric bacteria and to perform a Quantitative Microbial Risk Assessment (QMRA) of drinking water quality. Sanitary risk scores revealed `medium' and `low' overall risks for the wells and boreholes, respectively. Three risk factors (faulty fence; small apron; pollution sources) exhibited high significant (p < 0.01) association with the presence of E. coli and thermotolerant coliforms in water samples from the wells. E. coli and Salmonella ranged from 1.82 to 2.28 and 2.15 to 2.63 log10 CFU/100 ml respectively in water from the wells, but were below detection limit in water from the boreholes. Shigella and Campylobacter were detected in all water samples. Estimated risks of infection associated with Shigella (2.1 × 10−2 to 2.3 × 10−1) were higher than those of Campylobacter (6.7 × 10−2 to 1.9 × 10−1) and Salmonella (1.9×10−3 to 5.6×10−3). Adaption of water safety plans may be advantageous in these settings, since intentional ingestion of water from the wells and boreholes may pose potential risks of diarrheal illness to humans. HIGHLIGHTS Sanitary risks and water samples were collected from wells and boreholes.; Microbial risk assessment was used to evaluate human dose-response data.; Sanitary risk scores correlated positively with microbial water quality.; Risk factors exhibited significant association with the presence of E. coli.; Estimated risks of infection associated with Shigella were higher than those of Campylobacter and Salmonella.

Sanitary inspection and microbial health risks associated with enteric bacteria in some groundwater sources in Ilara-Mokin and Ibule-Soro, Nigeria

This study set out to determine the sanitary risk scores and microbial health risks associated with wells and boreholes in Ilara-Mokin and Ibule-Soro, Nigeria. Water samples (n = 96) were collected over a period of five months to determine the levels of enteric bacteria and to perform a Quantitative Microbial Risk Assessment (QMRA) of drinking water quality. Sanitary risk scores revealed `medium' and `low' overall risks for the wells and boreholes, respectively. Three risk factors (faulty fence; small apron; pollution sources) exhibited high significant (p < 0.01) association with the presence of E. coli and thermotolerant coliforms in water samples from the wells. E. coli and Salmonella ranged from 1.82 to 2.28 and 2.15 to 2.63 log10 CFU/100 ml respectively in water from the wells, but were below detection limit in water from the boreholes. Shigella and Campylobacter were detected in all water samples. Estimated risks of infection associated with Shigella (2.1 × 10−2 to 2.3 × 10−1) were higher than those of Campylobacter (6.7 × 10−2 to 1.9 × 10−1) and Salmonella (1.9×10−3 to 5.6×10−3). Adaption of water safety plans may be advantageous in these settings, since intentional ingestion of water from the wells and boreholes may pose potential risks of diarrheal illness to humans. HIGHLIGHTS Sanitary risks and water samples were collected from wells and boreholes.; Microbial risk assessment was used to evaluate human dose-response data.; Sanitary risk scores correlated positively with microbial water quality.; Risk factors exhibited significant association with the presence of E. coli.; Estimated risks of infection associated with Shigella were higher than those of Campylobacter and Salmonella.