Urban Environmental Pollution 2010: Trace Metal Dispersion in Soil from Auto-Mechanic Village to Urban Residential Areas in Owerri, Nigeria

Due to poor waste management in mechanic villages (MVs), average metal concentration (mgkg-1) is Pb 1162±572; Mn 864±531; Cu 385±202; Fe 49259±4770; Cd 20±13; Zn 824±190; and Ni 40±35, causing ecological and public health risks in parts of Nigeria. Average metal dispersion (mgkg-1/m) from MVs to residential areas was estimated at 9.2 for Pb; 6.7 for Mn; 6.1 for Zn; 1.5 for Cu; 197 for Fe; 0.3 for Ni; and 0.04 for Cd. This represents a mobility order of Fe\u3ePb\u3eMn\u3eZn\u3eCu\u3eNi\u3eCd, and a pollution order of Pb\u3eNi\u3eMn\u3eZn\u3eFe\u3eCu\u3eCd. MV advantages as a capacity building, and in poverty alleviation notwithstanding, its practice must be environmentally friendly

The SARS-CoV-2 spike protein binds and modulates estrogen receptors

The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike (S) protein binds angiotensin-converting enzyme 2 as its primary infection mechanism. Interactions between S and endogenous proteins occur after infection but are not well understood. We profiled binding of S against >9000 human proteins and found an interaction between S and human estrogen receptor alpha (ER alpha). Using bioinformatics, supercomputing, and experimental assays, we identified a highly conserved and functional nuclear receptor coregulator (NRC) LXD-like motif on the S2 sub-unit. In cultured cells, S DNA transfection increased ER alpha cytoplasmic accumulation, and S treatment induced ER-dependent biological effects. Non-invasive imaging in SARS-CoV-2-infected hamsters localized lung pathology with increased ER alpha lung levels. Postmortem lung experiments from infected hamsters and humans confirmed an increase in cytoplasmic ER alpha and its colocalization with S in alveolar macrophages. These findings describe the discovery of a S-ER alpha interaction, imply a role for S as an NRC, and advance knowledge of SARS-CoV-2 biology and coronavirus disease 2019 pathology

Methodology and reporting quality of 544 studies related to ageing: a continued discussion in setting priorities for ageing research in Africa

# Background The quality assessment provides information on the overall strength of evidence and methodological quality of a research design, highlighting the level of confidence the reader should place on the findings for decision making. This paper aimed to assess the quality (methodology and quality of reporting) of ageing studies in Sub-Saharan Africa (SSA). # Method This paper is the second of a Four-Part Series paper of a previous systematic mapping review of peer-reviewed literature on ageing studies conducted in SSA. We updated the literature search to include additional 32 articles, a total of 544 articles included in this paper. Downs & Black checklist, Case Report guidelines checklist, the 45-items Lundgren et al. checklist, and the Mixed Method Appraisal Tool were used to assess the methodological quality of quantitative, case reports, qualitative, and mixed-method studies. Quality assessment was piloted and conducted in pairs for each study type. Depending on the checklist, each study was classified as excellent, good, fair, or poor. # Result Of the 544 articles, we performed the quality assessment of a total of 451 quantitative studies $$Randomized control trials (RCTs) and pre-post (n=15), longitudinal (n=122), case-control (n=15) and cross-sectional (n=300); 4 case reports, 74 qualitative and 15 mixed-method studies. Only 20.4$$. The remaining 433 were rated as moderate quality (n=292, 53.7%), fair quality (n = 96, 17.7%) and poor quality (n = 45, 8.2%). Most (80%) quantitative articles' sample size is small, resulting in insufficient power to detect a clinically or significant important effect. Three-quarter (75%) of the qualitative studies did not report their research team characteristics and a reflexivity component of the 45-items Lundgren et al. checklist. Mixed-method studies with low quality did not report the qualitative studies properly. # Conclusion We conclude that the methodological and quality reporting of published studies on ageing in SSA show variable quality, albeit primarily moderate quality, against high quality. Studies with a large sample size are recommended, and qualitative researchers should provide a section on research team members' characteristics and reflexivity in their paper or as an appendix

Reduced evolutionary rate in reemerged Ebola virus transmission chains

On 29 June 2015, Liberia’s respite from Ebola virus disease (EVD) was interrupted for the second time by a renewed outbreak (“flare-up”) of seven confirmed cases. We demonstrate that, similar to the March 2015 flare-up associated with sexual transmission, this new flare-up was a reemergence of a Liberian transmission chain originating from a persistently infected source rather than a reintroduction from a reservoir or a neighboring country with active transmission. Although distinct, Ebola virus (EBOV) genomes from both flare-ups exhibit significantly low genetic divergence, indicating a reduced rate of EBOV evolution during persistent infection. Using this rate of change as a signature, we identified two additional EVD clusters that possibly arose from persistently infected sources. These findings highlight the risk of EVD flare-ups even after an outbreak is declared over

Mortality from gastrointestinal congenital anomalies at 264 hospitals in 74 low-income, middle-income, and high-income countries: a multicentre, international, prospective cohort study

Summary Background Congenital anomalies are the fifth leading cause of mortality in children younger than 5 years globally. Many gastrointestinal congenital anomalies are fatal without timely access to neonatal surgical care, but few studies have been done on these conditions in low-income and middle-income countries (LMICs). We compared outcomes of the seven most common gastrointestinal congenital anomalies in low-income, middle-income, and high-income countries globally, and identified factors associated with mortality. Methods We did a multicentre, international prospective cohort study of patients younger than 16 years, presenting to hospital for the first time with oesophageal atresia, congenital diaphragmatic hernia, intestinal atresia, gastroschisis, exomphalos, anorectal malformation, and Hirschsprung’s disease. Recruitment was of consecutive patients for a minimum of 1 month between October, 2018, and April, 2019. We collected data on patient demographics, clinical status, interventions, and outcomes using the REDCap platform. Patients were followed up for 30 days after primary intervention, or 30 days after admission if they did not receive an intervention. The primary outcome was all-cause, in-hospital mortality for all conditions combined and each condition individually, stratified by country income status. We did a complete case analysis. Findings We included 3849 patients with 3975 study conditions (560 with oesophageal atresia, 448 with congenital diaphragmatic hernia, 681 with intestinal atresia, 453 with gastroschisis, 325 with exomphalos, 991 with anorectal malformation, and 517 with Hirschsprung’s disease) from 264 hospitals (89 in high-income countries, 166 in middleincome countries, and nine in low-income countries) in 74 countries. Of the 3849 patients, 2231 (58·0%) were male. Median gestational age at birth was 38 weeks (IQR 36–39) and median bodyweight at presentation was 2·8 kg (2·3–3·3). Mortality among all patients was 37 (39·8%) of 93 in low-income countries, 583 (20·4%) of 2860 in middle-income countries, and 50 (5·6%) of 896 in high-income countries (p<0·0001 between all country income groups). Gastroschisis had the greatest difference in mortality between country income strata (nine [90·0%] of ten in lowincome countries, 97 [31·9%] of 304 in middle-income countries, and two [1·4%] of 139 in high-income countries; p≤0·0001 between all country income groups). Factors significantly associated with higher mortality for all patients combined included country income status (low-income vs high-income countries, risk ratio 2·78 [95% CI 1·88–4·11], p<0·0001; middle-income vs high-income countries, 2·11 [1·59–2·79], p<0·0001), sepsis at presentation (1·20 [1·04–1·40], p=0·016), higher American Society of Anesthesiologists (ASA) score at primary intervention (ASA 4–5 vs ASA 1–2, 1·82 [1·40–2·35], p<0·0001; ASA 3 vs ASA 1–2, 1·58, [1·30–1·92], p<0·0001]), surgical safety checklist not used (1·39 [1·02–1·90], p=0·035), and ventilation or parenteral nutrition unavailable when needed (ventilation 1·96, [1·41–2·71], p=0·0001; parenteral nutrition 1·35, [1·05–1·74], p=0·018). Administration of parenteral nutrition (0·61, [0·47–0·79], p=0·0002) and use of a peripherally inserted central catheter (0·65 [0·50–0·86], p=0·0024) or percutaneous central line (0·69 [0·48–1·00], p=0·049) were associated with lower mortality. Interpretation Unacceptable differences in mortality exist for gastrointestinal congenital anomalies between lowincome, middle-income, and high-income countries. Improving access to quality neonatal surgical care in LMICs will be vital to achieve Sustainable Development Goal 3.2 of ending preventable deaths in neonates and children younger than 5 years by 2030

A Comparative Analysis of Trace Metal Pollution Parity Between Sandy and Shaly Soils: Evidence from Two Mechanic Villages in the Imo River Basin

Heavy metal enrichment parity in sandy and shaly mechanic village (MV) soils was studied in order to explain the technical and economic imperatives of setting an environmentally friendly MV on either soil. Okigwe (shaly) and Nekede (sandy) mechanic village soils in the Imo River basin Nigeria were tested and compared. Spectroscopic analysis of the soil samples collected from three surface layers (L), where L1: 0-10 cm; L2: 10-20 cm and L3: 90-100 cm shows that Pb \u3e Cu \u3e Mn in the Okigwe MV, and Mn \u3e Pb \u3e Cu in the Nekede MV. Mean concentration of metals (mg kg-1) in Okigwe MV are Fe: 51,291 ± 18,148, Ni: 22 ± 4, Cd: 20 ± 3, Pb: 500 ± 513, Cu: 616 ± 369, Cr: 16 ± 9, and Mn: 378 ± 207. Similarly, Nekede MV has 22,101 ± 7,273 of Fe; 8 ± 0.8 of Ni; 11 ± 4 of Cd; 320 ± 122 of Pb; 265 ± 145 of Cu; 11 ± 2 of Cr; and 350 ± 191 of Mn. Pollution factor (Pf): Okigwe MV has 0.77, and Nekede has 0.68. Pollution degree: Okigwe MV is greater in L1 and L2, while Nekede is greater in L3, with greater potentials for Pb, and Mn mobility than the Okigwe. Both have similar trends of metal distribution, and significant correlation with their background values. Low clay-silt content in Nekede MV soil suggests low sorption capacity, whereas the high claysilt content (47-64%) of the Okigwe soil suggests lower bioavailability. Infiltration basin is not recommended in a MV on sandy soil if water table is near surface. In such case, the MV must be moved to a location where water table is[37 m, or have clay-shale material transported to the site to form impervious layer base for detention basin. For groundwater safety and sustainability, shaly soils are most recommended for MVs so that detention basin could be economically used for storm water treatment

Trace Metal Dispersion in Soil from Auto-Mechanic Village to Urban Residential Areas in Owerri, Nigeria

:Due to poor waste management in mechanic villages (MVs), average metal concentration (mgkg -1 ) is Pb 1162±572; Mn 864±531; Cu 385±202; Fe 49259±4770; Cd 20±13; Zn 824±190; and Ni 40±35, causing ecological and public health risks in parts of Nigeria. Average metal dispersion (mgkg-1/m) from MVs to residential areas was estimated at 9.2 for Pb; 6.7 for Mn; 6.1 for Zn; 1.5 for Cu; 197 for Fe; 0.3 for Ni; and 0.04 for Cd. This represents a mobility order of Fe\u3ePb\u3eMn\u3eZn\u3eCu\u3e Ni\u3eCd, and a pollution order of Pb\u3eNi\u3eMn\u3eZn\u3eFe\u3eCu\u3eCd. MV advantages as a capacity building, and in poverty alleviation notwithstanding, its practice must be environmentally friendly

Groundwater Flow Model and Particle Track Analysis for Selecting Water Quality Monitoring Well Sites, and Soil Sampling Profiles

Researchers often use only surface drainage (imperical method) as a tradition to locate sites for installation of water quality monitoring wells, and soil sampling profile for pollution studies in urban areas. They neglect that structural development may have altered the natural surface drainage. This paper demonstrates an advanced method; combining surface imperical method with a three-dimensional groundwater flow model and particle track analysis. This was performed using transient MODFLOW and MODPATH codes, as a first step in a pollution study of Owerri urban areas. Result was more reliable, showing diverging flows at Orji and Nekede auto-mechanic villages (MVs) due to relatively high elevation with the surroundings, and southward flow at the Obinze municipal waste dump (MWD). There were vertical flows at the sewage dumps (mangrove swamp areas) between Egbeda and Umuapu, and convergent flows along stream valleys. Particle tracking show an extended capture zone lying southeast. A total of eight water quality monitoring wells (WQ) was then recommended according to the directions of groundwater flow and particle releases from three tracking wells (ABC). WQ1: SE of Orji MV, WQ2: SE of Nekede MV, WQ3: south of Obinze MWD, WQ4: west of Egbeda, and WQ5: east of Umuapu. WQ6: NE of well A, WQ7: SW of well B, and WQ8: NE of well C. Soil sampling profiles; MVs: SE, MWD: South and sewage dumps: East and West. Distance of monitoring wells will vary according to the proximity of human settlements and shallow domestic wells (37m-55m) to the sites

Global Capacity, Potentials and Trends of Solid Waste Research and Management

In this study, United States, China, India, United Kingdom, Nigeria, Egypt, Brazil, Italy, Germany, Taiwan, Australia, Canada and Mexico were selected to represent the global community. This enabled an overview of solid waste management worldwide and between developed and developing countries. These are countries that feature most in the International Conference on Solid Waste Technology and Management (ICSW) over the past 20 years. A total of 1452 articles directly on solid waste management and technology were reviewed and credited to their original country of research. Results show significant solid waste research potentials globally, with the United States leading by 373 articles, followed by India with 230 articles. The rest of the countries are ranked in the order of: UK \u3e Taiwan \u3e Brazil \u3e Nigeria \u3e Italy \u3e Japan \u3e China \u3e Canada \u3e Germany \u3eMexico \u3e Egypt \u3e Australia. Global capacity in solid waste management options is in the order of: Waste characterisation-management \u3e waste biotech/composting \u3e waste to landfill \u3e waste recovery/reduction \u3e waste in construction \u3e waste recycling \u3e waste treatment–reuse–storage \u3e waste to energy \u3e waste dumping \u3e waste education/public participation/policy. It is observed that the solid waste research potential is not a measure of solid waste management capacity. The results show more significant research impacts on solid waste management in developed countries than in developing countries where economy, technology and society factors are not strong. This article is targeted to motivate similar study in each country, using solid waste research articles from other streamed databases to measure research impacts on solid waste management