Tu Dosis de Ciencia / Your Daily Dose of Science Blog

Since I started working in the lab doing research I have fallen even more in love with science than when I was in high school. I enjoy having conversations about science with people and every time I visit my family I want to talk to them about my research but this doesn’t go so well. Their knowledge about science and how scientific research is conducted is very limited and this is the case for the majority of the people in my home town, Marshalltown, IA. Even if they want to get a better understanding about these topics, there is a lack of resources in Spanish that provides this information in a way that is understandable to the average adult with minimum education. Because of this I wanted to provide a source (a blog in Spanish) where these people who want to learn about science can go to start learning how scientific research works. I also want to get others, which may not be thinking about science as being important, to look at it in a different way and see that it is an integral part of our daily lives and it should matter to them. My overall goal with the creation of a blog in Spanish is to improve science literacy for those who are interested in learning about science and to increase interest in science in those people who don’t consider science to be important to them

Limits of feedback control in bacterial chemotaxis

Inputs to signaling pathways can have complex statistics that depend on the environment and on the behavioral response to previous stimuli. Such behavioral feedback is particularly important in navigation. Successful navigation relies on proper coupling between sensors, which gather information during motion, and actuators, which control behavior. Because reorientation conditions future inputs, behavioral feedback can place sensors and actuators in an operational regime different from the resting state. How then can organisms maintain proper information transfer through the pathway while navigating diverse environments? In bacterial chemotaxis, robust performance is often attributed to the zero integral feedback control of the sensor, which guarantees that activity returns to resting state when the input remains constant. While this property provides sensitivity over a wide range of signal intensities, it remains unclear how other parameters affect chemotactic performance, especially when considering that the swimming behavior of the cell determines the input signal. Using analytical models and simulations that incorporate recent experimental evidences about behavioral feedback and flagellar motor adaptation we identify an operational regime of the pathway that maximizes drift velocity for various environments and sensor adaptation rates. This optimal regime is outside the dynamic range of the motor response, but maximizes the contrast between run duration up and down gradients. In steep gradients, the feedback from chemotactic drift can push the system through a bifurcation. This creates a non-chemotactic state that traps cells unless the motor is allowed to adapt. Although motor adaptation helps, we find that as the strength of the feedback increases individual phenotypes cannot maintain the optimal operational regime in all environments, suggesting that diversity could be beneficial.Comment: Corrected one typo. First two authors contributed equally. Notably, there were various typos in the values of the parameters in the model of motor adaptation. The results remain unchange

Bioelectrochemical production of graphene oxide using bacteria as biocatalysts

2019 Summer.Includes bibliographical references.The demand for production of graphene oxide (GO), which is a precursor for large-scale production of graphene, has been increasing due to the broad array of uses of both nanomaterials. Due to the unique electrical and mechanical properties of these 2D nanomaterials, applications in composites have shown enhancements by contributing a tunable energetic band gap, high strength, and high transparency among other features. The tunable band gap of the graphene derivatives is one of the key properties of these nanomaterials. By varying the size of the energetic band gap (in eV) between the conduction and valence bands, resistance can be decreased to promote electron flow in the material lattice. A large energetic band gap (insulators) means more resistance for electron flow. Being able to control the band gap of a nanomaterial, allows for many applications in batteries, supercapacitors, and semiconductors being the most promising applications for these nanomaterials. Other applications include flexible electronics, renewable energy, drug delivery, contaminant removal, sensors, and more. Unfortunately, large-scale production of graphene using current methods is challenging due to low yield, impurities, high cost, high energy input, slow production rates and/or hazardous chemical reactants and wastes. For this study, the focus was on the bioelectrochemical production of GO (BEGO) as a novel technology for producing these nanomaterials with low energy input, inexpensive and non-hazardous reagents at standard conditions, and using microbes as biocatalysts. The BEGO process consists of a single-chamber microbial electrosynthesis cell (MES) that uses a graphite rod anode and a cathode (carbon cloth or stainless steel) to drive redox reactions. This MES can be operated at low voltage in a three-electrode (-0.8-1.4V vs. Ag/AgCl), or two-electrode system (~3.1V DC), with bacteria inoculated in a phosphate media solution. During this study, the BEGO process was investigated to advance understanding of the production process and the properties of the BEGO nanomaterial produced. To achieve this, the objectives established include: 1) developing methods for purifying and quantifying the nanomaterial during the production process in the complex aqueous-phase reactor matrix, 2) identifying key physical and chemical properties of the nanomaterial product using various spectroscopy and microscopy techniques, and 3) analyzing the microbial communities present in the reactors and in the graphite anode biofilm. To quantify the BEGO and estimate production rates, different spectrophotometric and gravimetric methods were used. Ultraviolet-visible spectroscopy (UV-Vis) at 229 nm was found to be the best method. This wavelength is specific to GO as it corresponds to the π → π * transitions of aromatic C-C bonds comprising the majority of the molecule, regardless of the oxidation state. Different centrifugation and filtration protocols were compared to purify the BEGO out of the complex matrix. For quantification methods in solution, centrifugation at 10,000 x g for 15 minutes was found to be the most effective method for removal of large particles and biological material, with BEGO remaining in solution. For material characterization, various techniques were used to identify the functional groups present and the morphology of the BEGO sheets. It was found through Fourier transform infrared spectroscopy (FT-IR) and UV-Vis, that the nanomaterial contained less carboxyl/carbonyl groups than GO produced by the traditional Hummers' method. Raman spectroscopy and thermogravimetric analysis (TGA) showed high disorder and weight loss events consistent with known GO spectra. Microscopy analysis revealed the BEGO process yields sheet sizes of a few hundred nm to 1-2 µm in lateral dimensions. Transparency and Fast Fourier transform (FFT) images indicate the BEGO consists of only single-layered to few-layered structures, which are needed for downstream applications. The microbial analysis was done on bioreactors with different inocula sources. DNA and RNA were extracted from both the bulk liquid media and the rod biofilm. At the end of the operation period, microbial communities in the bioreactors had diverged from the inoculum source. Microbial communities in the BEGO producing reactors consisted of both aerobic and anaerobic microorganisms. The most abundant genera on the rod biofilm were the unknown Comamonadaceae (10-11%), Hydrogenophaga (9-21%), Methyloversatilis (15-22%), and Pseudomonas (11-36%) all from the Proteobacteria phylum. Thus, these microbial phylotypes may play a key role in catalyzing BEGO production, enabling this novel and sustainable approach to nanomaterial synthesis

STEM Education

It was determined through the literature that exposure to science early in a child\u27s education causes an increase in STEM. Also upon reflection as a group, we all could recall specific engagements as children that made us interested in science. So, we wanted to provide this for current students starting their STEM education. Our goal for this project was to get kids excited about science and learning about it. If we could make science fun they would more likely enjoy learning about it and get involved in science. Our target audience was kids in kindergarten through middle school. To be more specific, one of our activities was targeted at kindergartners specifically and the other activity was focused on kids that were between the grades kindergarten through middle school

¿Es posible alcanzar los Objetivos del Milenio en Colombia? Una evaluación de estrategias de focalización y financiamiento

Using the methodology of simulations from a model dynamic computable general equilibrium, which includes a module that involves behavior of the Millennium Development Goals (MDGs) assesses the potential macroeconomic and social effects of different ways to achieve those objectives in Colombia. Given the complementarity between each of the objectives, the strategy to achieve in education, health and water supply and sewage could be financed through taxation, since there is serious problems implementation when funding is raised through debt. From a micro-simulation exercise assesses the impact of such strategies on poverty and income distribution, which reported modest progress in reducing poverty, due, primarily to positive behavior in the rate of unemployment on poverty; the results are encouraging, because it is very close to meeting the objective. This makes clear that a country like Colombia requires more than achieving the other MDGs, to achieve the goals in poverty

(Ga,Mn)As based superlattices and the search for antiferromagnetic interlayer coupling

Antiferromagnetic interlayer coupling in dilute magnetic semiconductor superlattices could result in the realisation of large magnetoresistance effects analogous to the giant magnetoresistance seen in metallic multilayer structures. In this paper we use a mean-field theory of carrier induced ferromagnetism to explore the multidimensional parameter space available in (Ga,Mn)As based superlattice systems. Based on these investigations we examine the feasibility of creating a superlattice that exhibits antiferromagnetic coupling and suggest potentially viable recipes.Comment: 11 pages, 9 figure

Loss of active neurogenesis in the adult shark retina

Neurogenesis is the process by which progenitor cells generate new neurons. As development progresses neurogenesis becomes restricted to discrete neurogenic niches, where it persists during postnatal life. The retina of teleost fishes is thought to proliferate and produce new cells throughout life. Whether this capacity may be an ancestral characteristic of gnathostome vertebrates is completely unknown. Cartilaginous fishes occupy a key phylogenetic position to infer ancestral states fixed prior to the gnathostome radiation. Previous work from our group revealed that the juvenile retina of the catshark Scyliorhinus canicula, a cartilaginous fish, shows active proliferation and neurogenesis. Here, we compared the morphology and proliferative status of the retina in catshark juveniles and adults. Histological and immunohistochemical analyses revealed an important reduction in the size of the peripheral retina (where progenitor cells are mainly located), a decrease in the thickness of the inner nuclear layer (INL), an increase in the thickness of the inner plexiform layer and a decrease in the cell density in the INL and in the ganglion cell layer in adults. Contrary to what has been reported in teleost fish, mitotic activity in the catshark retina was virtually absent after sexual maturation. Based on these results, we carried out RNA-Sequencing (RNA-Seq) analyses comparing the retinal transcriptome of juveniles and adults, which revealed a statistically significant decrease in the expression of many genes involved in cell proliferation and neurogenesis in adult catsharks. Our RNA-Seq data provides an excellent resource to identify new signaling pathways controlling neurogenesis in the vertebrate retinaFunded by the Ministerio de Economía Industria y Competitividad (to EC; grant number BFU-2017-89861-P) and Xunta de Galicia Predoctoral Fellowship (to IH-N; grant number ED 481 A 2018 216). Both grants were partially financed by the European Social FundS