Table_2_Latitudinal patterns and environmental drivers of taxonomic, functional, and phylogenetic diversity of woody plants in western Amazonian terra firme forests.pdf

Elucidating how environmental factors drive plant species distributions and how they affect latitudinal diversity gradients, remain essential questions in ecology and biogeography. In this study we aimed: 1) to investigate the relationships between all three diversity attributes, i.e., taxonomic diversity (TD), functional diversity (FD), and phylogenetic diversity (PD); 2) to quantify the latitudinal variation in these diversity attributes in western Amazonian terra firme forests; and 3) to understand how climatic and edaphic drivers contribute to explaining diversity patterns. We inventoried ca. 15,000 individuals from ca. 1,250 species, and obtained functional trait records for ca. 5,000 woody plant individuals in 50 plots of 0.1 ha located in five terra firme forest sites spread over a latitudinal gradient of 1200 km covering ca. 10°C in latitude in western Amazonia. We calculated all three diversity attributes using Hill numbers: q = 0 (richness), q = 1 (richness weighted by relative abundance), and q = 2 (richness weighted by dominance). Generalized linear mixed models were constructed for each diversity attribute to test the effects of different uncorrelated environmental predictors comprising the temperature seasonality, annual precipitation, soil pH and soil bulk density, as well as accounting for the effect of spatial autocorrelation, i.e., plots aggregated within sites. We confirmed that TD (q = 0, q = 1, and q = 2), FD (q = 0, q = 1, and q = 2), and PD (q = 0) increased monotonically towards the Equator following the latitudinal diversity gradient. The importance of rare species could explain the lack of a pattern for PD (q = 1 and q = 2). Temperature seasonality, which was highly correlated with latitude, and annual precipitation were the main environmental drivers of variations in TD, FD, and PD. All three diversity attributes increased with lower temperature seasonality, higher annual precipitation, and lower soil pH. We confirmed the existence of latitudinal diversity gradients for TD, FD, and PD in hyperdiverse Amazonian terra firme forests. Our results agree well with the predictions of the environmental filtering principle and the favourability hypothesis, even acting in a 10°C latitudinal range within tropical climates.</p

Image_1_Latitudinal patterns and environmental drivers of taxonomic, functional, and phylogenetic diversity of woody plants in western Amazonian terra firme forests.jpeg

Elucidating how environmental factors drive plant species distributions and how they affect latitudinal diversity gradients, remain essential questions in ecology and biogeography. In this study we aimed: 1) to investigate the relationships between all three diversity attributes, i.e., taxonomic diversity (TD), functional diversity (FD), and phylogenetic diversity (PD); 2) to quantify the latitudinal variation in these diversity attributes in western Amazonian terra firme forests; and 3) to understand how climatic and edaphic drivers contribute to explaining diversity patterns. We inventoried ca. 15,000 individuals from ca. 1,250 species, and obtained functional trait records for ca. 5,000 woody plant individuals in 50 plots of 0.1 ha located in five terra firme forest sites spread over a latitudinal gradient of 1200 km covering ca. 10°C in latitude in western Amazonia. We calculated all three diversity attributes using Hill numbers: q = 0 (richness), q = 1 (richness weighted by relative abundance), and q = 2 (richness weighted by dominance). Generalized linear mixed models were constructed for each diversity attribute to test the effects of different uncorrelated environmental predictors comprising the temperature seasonality, annual precipitation, soil pH and soil bulk density, as well as accounting for the effect of spatial autocorrelation, i.e., plots aggregated within sites. We confirmed that TD (q = 0, q = 1, and q = 2), FD (q = 0, q = 1, and q = 2), and PD (q = 0) increased monotonically towards the Equator following the latitudinal diversity gradient. The importance of rare species could explain the lack of a pattern for PD (q = 1 and q = 2). Temperature seasonality, which was highly correlated with latitude, and annual precipitation were the main environmental drivers of variations in TD, FD, and PD. All three diversity attributes increased with lower temperature seasonality, higher annual precipitation, and lower soil pH. We confirmed the existence of latitudinal diversity gradients for TD, FD, and PD in hyperdiverse Amazonian terra firme forests. Our results agree well with the predictions of the environmental filtering principle and the favourability hypothesis, even acting in a 10°C latitudinal range within tropical climates.</p

Table_1_Latitudinal patterns and environmental drivers of taxonomic, functional, and phylogenetic diversity of woody plants in western Amazonian terra firme forests.pdf

Elucidating how environmental factors drive plant species distributions and how they affect latitudinal diversity gradients, remain essential questions in ecology and biogeography. In this study we aimed: 1) to investigate the relationships between all three diversity attributes, i.e., taxonomic diversity (TD), functional diversity (FD), and phylogenetic diversity (PD); 2) to quantify the latitudinal variation in these diversity attributes in western Amazonian terra firme forests; and 3) to understand how climatic and edaphic drivers contribute to explaining diversity patterns. We inventoried ca. 15,000 individuals from ca. 1,250 species, and obtained functional trait records for ca. 5,000 woody plant individuals in 50 plots of 0.1 ha located in five terra firme forest sites spread over a latitudinal gradient of 1200 km covering ca. 10°C in latitude in western Amazonia. We calculated all three diversity attributes using Hill numbers: q = 0 (richness), q = 1 (richness weighted by relative abundance), and q = 2 (richness weighted by dominance). Generalized linear mixed models were constructed for each diversity attribute to test the effects of different uncorrelated environmental predictors comprising the temperature seasonality, annual precipitation, soil pH and soil bulk density, as well as accounting for the effect of spatial autocorrelation, i.e., plots aggregated within sites. We confirmed that TD (q = 0, q = 1, and q = 2), FD (q = 0, q = 1, and q = 2), and PD (q = 0) increased monotonically towards the Equator following the latitudinal diversity gradient. The importance of rare species could explain the lack of a pattern for PD (q = 1 and q = 2). Temperature seasonality, which was highly correlated with latitude, and annual precipitation were the main environmental drivers of variations in TD, FD, and PD. All three diversity attributes increased with lower temperature seasonality, higher annual precipitation, and lower soil pH. We confirmed the existence of latitudinal diversity gradients for TD, FD, and PD in hyperdiverse Amazonian terra firme forests. Our results agree well with the predictions of the environmental filtering principle and the favourability hypothesis, even acting in a 10°C latitudinal range within tropical climates.</p

Trait data

Venation, trait, and climate data for tree species on an Andes-Amazon transect in southeastern Peru (CHAMBASA project)

South American mountain ecosystems and global change – a case study for integrating theory and field observations for land surface modelling and ecosystem management

Plot-based monitoring has yielded much information on the taxonomic diversity and carbon (C) storage in tropical lowland forests of the Amazon basin. This has resulted in an improved understanding of the relationship between lowland forest biomass dynamics and global change drivers, such as climate change and atmospheric CO2 concentration. Much less attention has been paid to the mountain ecosystems of South America that comprise montane forests and alpine vegetation (páramo, puna, high Andean grasslands, wetlands, and alpine heath). This vegetation complex provides a variety of ecosystem services and forms a natural laboratory along various physiographic, geological and evolutionary history/biogeography, and land use history gradients. Here we review existing empirical understanding and model-based approaches to quantify the contribution of mountain ecosystems to ecosystem service provision in the rapidly changing socioecological setting of the South American mountains. The objective of this paper is to outline a broad road map for the implementation of mountain vegetation into dynamic global vegetation models (DGVM) for use in Earth System Models (ESM), based on our current understanding of their structure and function and of their responsiveness to global change drivers. We also identify treeline processes, critical in mountain ecosystems, as key missing elements in DGVMs/ESMs, and thus explore in addition a treeline model. A stocktaking of availability of empirical data was undertaken from eight research sites along the Andes and in south-eastern Brazil. Out of eight sites, two (one each in Venezuela and Brazil) had some climate, ecological and ecophysiological data potentially suitable to parametrise a DGVM. Tree biomass data were available for six sites. A preliminary assessment of the Joint UK Land Environment Simulator (JULES) DGVM was made to identify gaps in available data and their impacts on model parametrisation and calibration. Additionally, the potential climate-determined elevation of the treeline was modelled to check the DGVM for its ability to identify the transition between the montane forest and alpine vegetation. Outcomes of the evaluation of the JULES land surface model identified the following key processes in montane forests: temperature-related decrease in net primary production, respiration, and allocation to above-ground biomass and increase in soil C stocks with elevation. There was a variable agreement between simulated biomass and those derived from field measurements via allometric equations. We identified major gaps between data availability and the needs of process-based modelling of South American mountain vegetation and its dynamics in DGVMs. To bridge this gap, we propose a transdisciplinary network, composed of members of the theoretical/modelling and empirical scientific communities to study the natural dynamics of mountain ecosystems and their responses to global change drivers locally, regionally and at the continent scale, within a social-ecological system framework. The work presented here forms the basis for the design of data collection from field measurements and instrumental monitoring stations to parametrise and verify DGVMs. The network is designed to collaborate with and complement existing long-term research initiatives in the region and will adopt existing standard field protocols. Complementary protocols will ensure compatibility between field data collection and data needs for process-based and empirical models.</p

The productivity, metabolism and carbon cycle of two lowland tropical forest plots in south-western Amazonia, Peru

<div><p> <b><i>Background:</i></b> The forests of western Amazonia are known to be more dynamic that the better-studied forests of eastern Amazonia, but there has been no comprehensive description of the carbon cycle of a western Amazonian forest.</p> <p> <b><i>Aims:</i></b> We present the carbon budget of two forest plots in Tambopata in south-eastern Peru, western Amazonia. In particular, we present, for the first time, the seasonal variation in the detailed carbon budget of a tropical forest.</p> <p> <b><i>Methods:</i></b> We measured the major components of net primary production (NPP) and total autotrophic respiration over 3–6 years.</p> <p> <b><i>Results:</i></b> The NPP for the two plots was 15.1 ± 0.8 and 14.2 ± 1.0 Mg C ha⁻¹ year⁻¹, the gross primary productivity (GPP) was 35.5 ± 3.6 and 34.5 ± 3.5 Mg C ha⁻¹ year⁻¹, and the carbon use efficiency (CUE) was 0.42 ± 0.05 and 0.41 ± 0.05. NPP and CUE showed a large degree of seasonality.</p> <p> <b><i>Conclusions:</i></b> The two plots were similar in carbon cycling characteristics despite the different soils, the most notable difference being high allocation of NPP to canopy and low allocation to fine roots in the Holocene floodplain plot. The timing of the minima in the wet–dry transition suggests they are driven by phenological rhythms rather than being driven directly by water stress. When compared with results from forests on infertile forests in humid lowland eastern Amazonia, the plots have slightly higher GPP, but similar patterns of CUE and carbon allocation.</p> </div