Can bacterial plant pathogens be written off from grain discolourations observed on rice in northern Queensland?

Grain discolouration can be attributed to both fungi and bacteria, where previous studies have largely ignored the involvement of bacterial pathogens in grain discolouration in northern Queensland (QLD). However, a few reports shown the involving bacteria in grain discolouration in southern New South Wales. The purpose of this study was to investigate the involvement of bacteria in rice grain discolouration in northern QLD. More than 40 bacterial isolates were obtained from discoloured grains collected from northern QLD during the wet and dry seasons in 2018 and the wet season in 2019. Identification based on 16S rRNA gene sequencing was performed for all the isolates, followed by a pathogenicity test on a single rice cultivar, Opus

Syringopeptin contributes to the virulence of Pseudomonas fuscovaginae, based on sypA biosynthesis mutant analysis

Pseudomonas fuscovaginae, first reported from Japan in 1976, is now present in many agroecological regions around the world; it causes sheath brown rot of rice and is reported as a pathogen of a broad range of hosts. The pathogen can infect rice plants at all stages of growth and is known to cause significant losses due to grain discoloration, poor spike emergence and panicle sterility. Limited information is available on the virulence and mechanisms of pathogenicity for P. fuscovaginae. To address this, an analysis of genomes was conducted, which identified the presence of a gene showing homology to one of the genes contributing to syringopeptin synthetase (sypA) of P. syringae pv. syringae. To study the potential role of this gene in the virulence and pathogenicity of P. fuscovaginae, a site-specific mutation was created. Following inoculation of seeds and plantlets of rice and wheat with P. fuscovaginae wild types and their respective mutants, we demonstrated that the mutation significantly reduced virulence. This was evident on rice and wheat inoculated with mutants causing a significantly higher number of roots, length of roots and seedling height compared with their respective wild types. Characteristic disease symptoms of necrotic lesions were significantly less in rice seedlings infected with bacterial suspensions of mutants indicating a reduction in virulence. Chromatography analysis of bacterial exudates showed suppression of synthesis of metabolites analogous to syringopeptin in the mutants. These data demonstrate that the protein encoded by this sypA homolog gene is a major virulence determinant of P. fuscovaginae

Dung Beetle Activity Is Soil-Type-Dependent and Modulates Pasture Growth and Associated Soil Microbiome

The introduction of numerous exotic dung beetles across southern Australia in regions where native dung beetles are not generally efficient in processing livestock dung has resulted in significant reductions in the quantity of such dung on the soil surface in recent years. However, the direct impacts of such ecosystem services on pasture quality and soil nutrient mobility have not yet been investigated in the Riverina region of New South Wales (NSW), an area recognised for prime cattle and sheep production in Australia. Utilising 48 soil columns for lysimetry, we quantified the impact of a common introduced dung beetle (Bubas bison) in this region on water quality after permeation through four different soil types sown to winter annual pastures. Dung beetle treatments included dung plus dung beetles, dung alone and no dung beetles, and no dung and no beetles as a control. Dung beetles and soil type impacted on the performance of improved overseeded annual pastures as measured by biomass accumulation over a four-month growing season. The four soil types, namely, Chromosol, Kandosol, Rudosol, and Vertosol, differed considerably with respect to their water-holding capacity and nutrient profiles, as assessed by initial soil testing and soil leachate evaluation following rainfall plus simulated rainfall events. The concentration of Escherichia coli resulting from cattle dung, cattle dung plus beetles, and the control soils without dung or beetles was assessed in collected leachates over a three-month period. E. coli numbers were significantly increased following B. bison activity, when compared to the dung-only and control treatments. Evaluation of the soil microbiome, by assessing genomic DNA in soils sampled 10 cm below the soil surface where dung beetles remained active following tunnelling, revealed significant differences among soil types with respect to bacterial and fungal communities. Within each soil type, dung beetle activity impacted the fungal community structure, but not the bacterial community. Pasture performance as assessed by biomass accumulation was significantly improved following dung beetle activity in later stages of pasture growth, while E. coli numbers and total coliforms appeared unaffected by beetle presence

Dung Beetle Activity Is Soil-Type-Dependent and Modulates Pasture Growth and Associated Soil Microbiome

The introduction of numerous exotic dung beetles across southern Australia in regions where native dung beetles are not generally efficient in processing livestock dung has resulted in significant reductions in the quantity of such dung on the soil surface in recent years. However, the direct impacts of such ecosystem services on pasture quality and soil nutrient mobility have not yet been investigated in the Riverina region of New South Wales (NSW), an area recognised for prime cattle and sheep production in Australia. Utilising 48 soil columns for lysimetry, we quantified the impact of a common introduced dung beetle (Bubas bison) in this region on water quality after permeation through four different soil types sown to winter annual pastures. Dung beetle treatments included dung plus dung beetles, dung alone and no dung beetles, and no dung and no beetles as a control. Dung beetles and soil type impacted on the performance of improved overseeded annual pastures as measured by biomass accumulation over a four-month growing season. The four soil types, namely, Chromosol, Kandosol, Rudosol, and Vertosol, differed considerably with respect to their water-holding capacity and nutrient profiles, as assessed by initial soil testing and soil leachate evaluation following rainfall plus simulated rainfall events. The concentration of Escherichia coli resulting from cattle dung, cattle dung plus beetles, and the control soils without dung or beetles was assessed in collected leachates over a three-month period. E. coli numbers were significantly increased following B. bison activity, when compared to the dung-only and control treatments. Evaluation of the soil microbiome, by assessing genomic DNA in soils sampled 10 cm below the soil surface where dung beetles remained active following tunnelling, revealed significant differences among soil types with respect to bacterial and fungal communities. Within each soil type, dung beetle activity impacted the fungal community structure, but not the bacterial community. Pasture performance as assessed by biomass accumulation was significantly improved following dung beetle activity in later stages of pasture growth, while E. coli numbers and total coliforms appeared unaffected by beetle presence