Domain-wall fermions with U(1)U(1) dynamical gauge fields

We have carried out a numerical simulation of a domain-wall model in $(2+1)$-dimensions, in the presence of a dynamical gauge field only in an extra dimension, corresponding to the weak coupling limit of a ( 2-dimensional ) physical gauge coupling. Using a quenched approximation we have investigated this model at $\beta_{s} ( = 1 / g^{2}_{s} ) =$ 0.5 ( ``symmetric'' phase), 1.0, and 5.0 (``broken'' phase), where $g_s$ is the gauge coupling constant of the extra dimension. We have found that there exists a critical value of a domain-wall mass $m_{0}^{c}$ which separates a region with a fermionic zero mode on the domain-wall from the one without it, in both symmetric and broken phases. This result suggests that the domain-wall method may work for the construction of lattice chiral gauge theories.Comment: 27 pages (11 figures), latex (epsf style-file needed

A continuum treatment of growth in biological tissue: The coupling of mass transport and mechanics

Growth (and resorption) of biological tissue is formulated in the continuum setting. The treatment is macroscopic, rather than cellular or sub-cellular. Certain assumptions that are central to classical continuum mechanics are revisited, the theory is reformulated, and consequences for balance laws and constitutive relations are deduced. The treatment incorporates multiple species. Sources and fluxes of mass, and terms for momentum and energy transfer between species are introduced to enhance the classical balance laws. The transported species include: (\romannumeral 1) a fluid phase, and (\romannumeral 2) the precursors and byproducts of the reactions that create and break down tissue. A notable feature is that the full extent of coupling between mass transport and mechanics emerges from the thermodynamics. Contributions to fluxes from the concentration gradient, chemical potential gradient, stress gradient, body force and inertia have not emerged in a unified fashion from previous formulations of the problem. The present work demonstrates these effects via a physically-consistent treatment. The presence of multiple, interacting species requires that the formulation be consistent with mixture theory. This requirement has far-reaching consequences. A preliminary numerical example is included to demonstrate some aspects of the coupled formulation.Comment: 29 pages, 11 figures, accepted for publication in Journal of the Mechanics and Physics of Solids. See journal for final versio

Perturbative study for domain-wall fermions in 4+1 dimensions

We investigate a U(1) chiral gauge model in 4+1 dimensions formulated on the lattice via the domain-wall method. We calculate an effective action for smooth background gauge fields at a fermion one loop level. From this calculation we discuss properties of the resulting 4 dimensional theory, such as gauge invariance of 2 point functions, gauge anomalies and an anomaly in the fermion number current.Comment: 39 pages incl. 9 figures, REVTeX+epsf, uuencoded Z-compressed .tar fil

Chiral Symmetry Restoration in the Schwinger Model with Domain Wall Fermions

Domain Wall Fermions utilize an extra space time dimension to provide a method for restoring the regularization induced chiral symmetry breaking in lattice vector gauge theories even at finite lattice spacing. The breaking is restored at an exponential rate as the size of the extra dimension increases. Before this method can be used in dynamical simulations of lattice QCD, the dependence of the restoration rate to the other parameters of the theory and, in particular, the lattice spacing must be investigated. In this paper such an investigation is carried out in the context of the two flavor lattice Schwinger model.Comment: LaTeX, 37 pages including 18 figures. Added comments regarding power law fitting in sect 7. Also, few changes were made to elucidate the content in sect. 5.1 and 5.3. To appear in Phys. Rev.

X-ray Near Field Speckle: Implementation and Critical Analysis

We have implemented the newly-introduced, coherence-based technique of x-ray near-field speckle (XNFS) at 8-ID-I at the Advanced Photon Source. In the near field regime of high-brilliance synchrotron x-rays scattered from a sample of interest, it turns out, that, when the scattered radiation and the main beam both impinge upon an x-ray area detector, the measured intensity shows low-contrast speckles, resulting from interference between the incident and scattered beams. We built a micrometer-resolution XNFS detector with a high numerical aperture microscope objective and demonstrate its capability for studying static structures and dynamics at longer length scales than traditional far field x-ray scattering techniques. Specifically, we characterized the structure and dynamics of dilute silica and polystyrene colloidal samples. Our study reveals certain limitations of the XNFS technique, which we discuss.Comment: 53 pages, 16 figure

Noncompact chiral U(1) gauge theories on the lattice

A new, adiabatic phase choice is adopted for the overlap in the case of an infinite volume, noncompact abelian chiral gauge theory. This gauge choice obeys the same symmetries as the Brillouin-Wigner (BW) phase choice, and, in addition, produces a Wess-Zumino functional that is linear in the gauge variables on the lattice. As a result, there are no gauge violations on the trivial orbit in all theories, consistent and covariant anomalies are simply related and Berry's curvature now appears as a Schwinger term. The adiabatic phase choice can be further improved to produce a perfect phase choice, with a lattice Wess-Zumino functional that is just as simple as the one in continuum. When perturbative anomalies cancel, gauge invariance in the fermionic sector is fully restored. The lattice effective action describing an anomalous abelian gauge theory has an explicit form, close to one analyzed in the past in a perturbative continuum framework.Comment: 35 pages, one figure, plain TeX; minor typos corrected; to appear in PR

Biological remodelling: Stationary energy, configurational change, internal variables and dissipation

Remodelling is defined as an evolution of microstructure or variations in the configuration of the underlying manifold. The manner in which a biological tissue and its subsystems remodel their structure is treated in a continuum mechanical setting. While some examples of remodelling are conveniently modelled as evolution of the reference configuration (Case I), others are more suited to an internal variable description (Case II). In this paper we explore the applicability of stationary energy states to remodelled systems. A variational treatment is introduced by assuming that stationary energy states are attained by changes in microstructure via one of the two mechanisms--Cases I and II. An example is presented to illustrate each case. The example illustrating Case II is further studied in the context of the thermodynamic dissipation inequality.Comment: 24 pages, 4 figures. Replaced version has corrections to typos in equations, and the corresponding correct plot of the solution--all in Section