78 research outputs found
PENGEMBANGAN MEDIA PEMBELAJARAN INTERAKTIF GOOGLE SLIDES PADA MATERI PENGGOLONGAN HEWAN BERDASARKAN JENIS MAKANANNYA
This research aims to develop interactive learning media based on Google Slides on material on classifying animals based on type of food and to determine the feasibility of interactive learning media based on Google Slides on material on classifying animals based on type of food. The research was conducted in class V-C at SDN Petir 4, Tangerang City with a total of 40 students. The method used is R&D (research and development) with the 4D research model (define, design, development, disseminate) developed by Thiagarajan. The average percentage obtained from material experts I and II was 91.67% with a very reasonable interpretation. The average percentage obtained from media experts I and II was 90.67% with a very reasonable interpretation. The student response questionnaire obtained an average of 93% with a very decent interpretation. Based on the percentage of research results that have been mentioned, it can be concluded that this research has produced an interactive learning media product based on Google Slides which contains material on classifying animals based on their type of food with categories that are very suitable for use in learning activities in class V elementary schools.Penelitian ini bertujuan untuk mengembangkan media pembelajaran interaktif berbasis Google Slides pada materi mengelompokkan hewan berdasarkan jenis makanannya dan mengetahui kelayakan media pembelajaran interaktif berbasis Google Slides pada materi mengelompokkan hewan berdasarkan jenis makanannya. Penelitian ini dilakukan di kelas V-C SDN Petir 4 Kota Tangerang yang berjumlah 40 siswa. Metode yang digunakan adalah R&D (research and development) dengan model penelitian 4D (define, design, development, disseminate) yang dikembangkan oleh Thiagarajan. Rata-rata persentase yang diperoleh dari ahli materi I dan II sebesar 91,67% dengan interpretasi sangat layak. Rata-rata persentase yang diperoleh dari ahli media I dan II sebesar 90,67% dengan interpretasi sangat layak. Angket respon siswa memperoleh rata-rata 93% dengan interpretasi sangat layak. Berdasarkan persentase hasil penelitian yang telah disebutkan maka dapat disimpulkan bahwa penelitian ini telah menghasilkan produk media pembelajaran interaktif berbasis Google Slides yang berisi materi pengelompokan hewan berdasarkan jenis makanannya dengan kategori sangat layak digunakan dalam kegiatan pembelajaran di kelas V sekolah dasar
Towards an AI to Win Ghana's National Science and Maths Quiz
Can an AI win Ghana's National Science and Maths Quiz (NSMQ)? That is the
question we seek to answer in the NSMQ AI project, an open-source project that
is building AI to compete live in the NSMQ and win. The NSMQ is an annual live
science and mathematics competition for senior secondary school students in
Ghana in which 3 teams of 2 students compete by answering questions across
biology, chemistry, physics, and math in 5 rounds over 5 progressive stages
until a winning team is crowned for that year. The NSMQ is an exciting live
quiz competition with interesting technical challenges across speech-to-text,
text-to-speech, question-answering, and human-computer interaction. In this
ongoing work that began in January 2023, we give an overview of the project,
describe each of the teams, progress made thus far, and the next steps toward
our planned launch and debut of the AI in October for NSMQ 2023. An AI that
conquers this grand challenge can have real-world impact on education such as
enabling millions of students across Africa to have one-on-one learning support
from this AI.Comment: 7 pages. Under review at Deep Learning Indaba and Black in AI
Workshop @NeurIPS 202
Development in Astronomy and Space Science in Africa
The development of astronomy and space science in Africa has grown
significantly over the past few years. These advancements make the United
Nations Sustainable Development Goals more achievable, and open up the
possibility of new beneficial collaborations.Comment: Paper published in Nature Astronomy. Figures 1 and 2 are included in
the published version, that can be seen at https://rdcu.be/2oE
Genome maps across 26 human populations reveal population-specific patterns of structural variation.
Large structural variants (SVs) in the human genome are difficult to detect and study by conventional sequencing technologies. With long-range genome analysis platforms, such as optical mapping, one can identify large SVs (>2 kb) across the genome in one experiment. Analyzing optical genome maps of 154 individuals from the 26 populations sequenced in the 1000 Genomes Project, we find that phylogenetic population patterns of large SVs are similar to those of single nucleotide variations in 86% of the human genome, while ~2% of the genome has high structural complexity. We are able to characterize SVs in many intractable regions of the genome, including segmental duplications and subtelomeric, pericentromeric, and acrocentric areas. In addition, we discover ~60 Mb of non-redundant genome content missing in the reference genome sequence assembly. Our results highlight the need for a comprehensive set of alternate haplotypes from different populations to represent SV patterns in the genome
The return of metabolism: biochemistry and physiology of the pentose phosphate pathway.
The pentose phosphate pathway (PPP) is a fundamental component of cellular metabolism. The PPP is important to maintain carbon homoeostasis, to provide precursors for nucleotide and amino acid biosynthesis, to provide reducing molecules for anabolism, and to defeat oxidative stress. The PPP shares reactions with the Entner-Doudoroff pathway and Calvin cycle and divides into an oxidative and non-oxidative branch. The oxidative branch is highly active in most eukaryotes and converts glucose 6-phosphate into carbon dioxide, ribulose 5-phosphate and NADPH. The latter function is critical to maintain redox balance under stress situations, when cells proliferate rapidly, in ageing, and for the 'Warburg effect' of cancer cells. The non-oxidative branch instead is virtually ubiquitous, and metabolizes the glycolytic intermediates fructose 6-phosphate and glyceraldehyde 3-phosphate as well as sedoheptulose sugars, yielding ribose 5-phosphate for the synthesis of nucleic acids and sugar phosphate precursors for the synthesis of amino acids. Whereas the oxidative PPP is considered unidirectional, the non-oxidative branch can supply glycolysis with intermediates derived from ribose 5-phosphate and vice versa, depending on the biochemical demand. These functions require dynamic regulation of the PPP pathway that is achieved through hierarchical interactions between transcriptome, proteome and metabolome. Consequently, the biochemistry and regulation of this pathway, while still unresolved in many cases, are archetypal for the dynamics of the metabolic network of the cell. In this comprehensive article we review seminal work that led to the discovery and description of the pathway that date back now for 80 years, and address recent results about genetic and metabolic mechanisms that regulate its activity. These biochemical principles are discussed in the context of PPP deficiencies causing metabolic disease and the role of this pathway in biotechnology, bacterial and parasite infections, neurons, stem cell potency and cancer metabolism.We acknowledge
funding from the European Commission (Brussels)
Role ofMitochondria in Conserved Mechanisms of
Aging (MIMAGE) Project (Contract 512020, to M.B.),
the Cancer Research Programme Grant (C197/A3514
to K.M.B.), Cancer Research UK and ERC Grants
322842-METABOp53 (supporting E.C.), the Wellcome
Trust (RG 093735/Z/10/Z to M.R.), the ERC (Starting
grant 260809 to M.R.), the German Research
Foundation DFG (PR 1527/1-1 to A.P.), and the Austrian
Science Fund (FWF) S9302-B05 (to M.B.). V.O.-S.
is supported by Consejo Nacional de Ciencia y Tecnologia
(CONACyT) Mexico postdoctoral fellowship
203450, M.A.K. by the FWF (Austria) by an Erwin
Schroedinger postdoctoral fellowship (J 3341). M.R.
is a Wellcome-Trust Research career development and
Wellcome-Beit prize fellow.This is the final published version. It is also available from Wiley at http://onlinelibrary.wiley.com/doi/10.1111/brv.12140/abstract
Integration of non-communicable disease and HIV/AIDS management: a review of healthcare policies and plans in East Africa
Background Low-income and middle-income countries are struggling to manage growing numbers of patients with chronic non-communicable diseases (NCDs), while services for patients with HIV infection are well established. There have been calls for integration of HIV and NCD services to increase efficiency and improve coverage of NCD care, although evidence of effectiveness remains unclear. In this review, we assess the extent to which National HIV and NCD policies in East Africa reflect the calls for HIV-NCD service integration.
Methods Between April 2018 and December 2020, we searched for policies, strategies and guidelines associated with HIV and NCDs programmes in Burundi, Kenya, Rwanda, South Sudan, Tanzania and Uganda. Documents were searched manually for plans for integration of HIV and NCD services. Data were analysed qualitatively using document analysis.
Results Thirty-one documents were screened, and 13 contained action plans for HIV and NCDs service integration. Integrated delivery of HIV and NCD care is recommended in high level health policies and treatment guidelines in four countries in the East African region; Kenya, Rwanda, Tanzania and Uganda, mostly relating to integrating NCD care into HIV programmes. The increasing burden of NCDs, as well as a move towards person-centred differentiated delivery of services for people living with HIV, is a factor in the recent adoption of integrated HIV and NCD service delivery plans. Both South Sudan and Burundi report a focus on building their healthcare infrastructure and improving coverage and quality of healthcare provision, with no reported plans for HIV and NCD care integration.
Conclusion Despite the limited evidence of effectiveness, some East African countries have already taken steps towards HIV and NCD service integration. Close monitoring and evaluation of the integrated HIV and NCD programmes is necessary to provide insight into the associated benefits and risks, and to inform future service developments
Improved species assignments across the entire Anopheles genus using targeted sequencing
Accurate species identification of the mosquitoes in the genus Anopheles is of crucial importance to implement malaria control measures and monitor their effectiveness. We use a previously developed amplicon panel (ANOSPP) that retrieves sequence data from multiple short nuclear loci for any species in the genus. Species assignment is based on comparison of samples to a reference index using k-mer distance. Here, we provide a protocol to generate version controlled updates of the reference index and present its latest release, NNv2, which contains 91 species, compared to 56 species represented in its predecessor NNv1. With the updated reference index, we are able to assign samples to species level that previously could not be assigned. We discuss what happens if a species is not represented in the reference index and how this can be addressed in a future update. To demonstrate the increased power of NNv2, we showcase the assignments of 1789 wild-caught mosquitoes from Madagascar and demonstrate that we can detect within species population structure from the amplicon sequencing data
Operation Moonshot: rapid translation of a SARS-CoV-2 targeted peptide immunoaffinity liquid chromatography-tandem mass spectrometry test from research into routine clinical use
OBJECTIVES: During 2020, the UK's Department of Health and Social Care (DHSC) established the Moonshot programme to fund various diagnostic approaches for the detection of SARS-CoV-2, the pathogen behind the COVID-19 pandemic. Mass spectrometry was one of the technologies proposed to increase testing capacity. METHODS: Moonshot funded a multi-phase development programme, bringing together experts from academia, industry and the NHS to develop a state-of-the-art targeted protein assay utilising enrichment and liquid chromatography tandem mass spectrometry (LC-MS/MS) to capture and detect low levels of tryptic peptides derived from SARS-CoV-2 virus. The assay relies on detection of target peptides, ADETQALPQRK (ADE) and AYNVTQAFGR (AYN), derived from the nucleocapsid protein of SARS-CoV-2, measurement of which allowed the specific, sensitive, and robust detection of the virus from nasopharyngeal (NP) swabs. The diagnostic sensitivity and specificity of LC-MS/MS was compared with reverse transcription quantitative real-time polymerase chain reaction (RT-qPCR) via a prospective study. RESULTS: Analysis of NP swabs (n=361) with a median RT-qPCR quantification cycle (Cq) of 27 (range 16.7-39.1) demonstrated diagnostic sensitivity of 92.4% (87.4-95.5), specificity of 97.4% (94.0-98.9) and near total concordance with RT-qPCR (Cohen's Kappa 0.90). Excluding Cq>32 samples, sensitivity was 97.9% (94.1-99.3), specificity 97.4% (94.0-98.9) and Cohen's Kappa 0.95. CONCLUSIONS: This unique collaboration between academia, industry and the NHS enabled development, translation, and validation of a SARS-CoV-2 method in NP swabs to be achieved in 5 months. This pilot provides a model and pipeline for future accelerated development and implementation of LC-MS/MS protein/peptide assays into the routine clinical laboratory
Personalized bacteriophage therapy outcomes for 100 consecutive cases:a multicentre, multinational, retrospective observational study
In contrast to the many reports of successful real-world cases of personalized bacteriophage therapy (BT), randomized controlled trials of non-personalized bacteriophage products have not produced the expected results. Here we present the outcomes of a retrospective observational analysis of the first 100 consecutive cases of personalized BT of difficult-to-treat infections facilitated by a Belgian consortium in 35 hospitals, 29 cities and 12 countries during the period from 1 January 2008 to 30 April 2022. We assessed how often personalized BT produced a positive clinical outcome (general efficacy) and performed a regression analysis to identify functional relationships. The most common indications were lower respiratory tract, skin and soft tissue, and bone infections, and involved combinations of 26 bacteriophages and 6 defined bacteriophage cocktails, individually selected and sometimes pre-adapted to target the causative bacterial pathogens. Clinical improvement and eradication of the targeted bacteria were reported for 77.2% and 61.3% of infections, respectively. In our dataset of 100 cases, eradication was 70% less probable when no concomitant antibiotics were used (odds ratio = 0.3; 95% confidence interval = 0.127–0.749). In vivo selection of bacteriophage resistance and in vitro bacteriophage–antibiotic synergy were documented in 43.8% (7/16 patients) and 90% (9/10) of evaluated patients, respectively. We observed a combination of antibiotic re-sensitization and reduced virulence in bacteriophage-resistant bacterial isolates that emerged during BT. Bacteriophage immune neutralization was observed in 38.5% (5/13) of screened patients. Fifteen adverse events were reported, including seven non-serious adverse drug reactions suspected to be linked to BT. While our analysis is limited by the uncontrolled nature of these data, it indicates that BT can be effective in combination with antibiotics and can inform the design of future controlled clinical trials. BT100 study, ClinicalTrials.gov registration: NCT05498363.</p
Predictors of Enhancing Human Physical Attractiveness: Data from 93 Countries
People across the world and throughout history have gone to great lengths to enhance their physical appearance. Evolutionary psychologists and ethologists have largely attempted to explain this phenomenon via mating preferences and strategies. Here, we test one of the most popular evolutionary hypotheses for beauty-enhancing behaviors, drawn from mating market and parasite stress perspectives, in a large cross-cultural sample. We also test hypotheses drawn from other influential and non-mutually exclusive theoretical frameworks, from biosocial role theory to a cultural media perspective. Survey data from 93,158 human participants across 93 countries provide evidence that behaviors such as applying makeup or using other cosmetics, hair grooming, clothing style, caring for body hygiene, and exercising or following a specific diet for the specific purpose of improving ones physical attractiveness, are universal. Indeed, 99% of participants reported spending \u3e10 min a day performing beauty-enhancing behaviors. The results largely support evolutionary hypotheses: more time was spent enhancing beauty by women (almost 4 h a day, on average) than by men (3.6 h a day), by the youngest participants (and contrary to predictions, also the oldest), by those with a relatively more severe history of infectious diseases, and by participants currently dating compared to those in established relationships. The strongest predictor of attractiveness-enhancing behaviors was social media usage. Other predictors, in order of effect size, included adhering to traditional gender roles, residing in countries with less gender equality, considering oneself as highly attractive or, conversely, highly unattractive, TV watching time, higher socioeconomic status, right-wing political beliefs, a lower level of education, and personal individualistic attitudes. This study provides novel insight into universal beauty-enhancing behaviors by unifying evolutionary theory with several other complementary perspectives
- …