Measures of Light in Studies on Light-Driven Plant Plasticity in Artificial Environments

Within-canopy variation in light results in profound canopy profiles in foliage structural, chemical, and physiological traits. Studies on within-canopy variations in key foliage traits are often conducted in artificial environments, including growth chambers with only artificial light, and greenhouses with and without supplemental light. Canopy patterns in these systems are considered to be representative to outdoor conditions, but in experiments with artificial and supplemental lighting, the intensity of artificial light strongly deceases with the distance from the light source, and natural light intensity in greenhouses is less than outdoors due to limited transmittance of enclosure walls. The implications of such changes in radiation conditions on canopy patterns of foliage traits have not yet been analyzed. We developed model-based methods for retrospective estimation of distance vs. light intensity relationships, for separation of the share of artificial and natural light in experiments with combined light and for estimation of average enclosure transmittance, and estimated daily integrated light at the time of sampling (Qint,C), at foliage formation (Qint,G), and during foliage lifetime (Qint,av). The implications of artificial light environments were analyzed for altogether 25 studies providing information on within-canopy gradients of key foliage traits for 70 species × treatment combinations. Across the studies with artificial light, Qint,G for leaves formed at different heights in the canopy varied from 1.8- to 6.4-fold due to changing the distance between light source and growing plants. In experiments with combined lighting, the share of natural light at the top of the plants varied threefold, and the share of natural light strongly increased with increasing depth in the canopy. Foliage nitrogen content was most strongly associated with Qint,G, but photosynthetic capacity with Qint,C, emphasizing the importance of explicit description of light environment during foliage lifetime. The reported and estimated transmittances of enclosures varied between 0.27 and 0.85, and lack of consideration of the reduction of light compared with outdoor conditions resulted in major underestimation of foliage plasticity to light. The study emphasizes that plant trait vs. light relationships in artificial systems are not directly comparable to natural environments unless modifications in lighting conditions in artificial environments are taken into account.Organismic and Evolutionary Biolog

Greenhouse gas balance of open peatlands is globally governed by soil water content and archaeal abundance : EGU21-8969

Peer reviewedPublisher PD

Plant-plant interactions and N fertilization shape soil bacterial and fungal communities

The impact of conspecific and heterospecific neighboring plants on soil bacterial and fungal communities has never been explored in a forest ecosystem. In the present study, we first investigated soil microbial communities in three plantations: Larix kaempferi monoculture, L. olgensis monoculture and their mixture. Then, a two-year growth experiment was conducted to investigate the effects of intra- and inter-specific interactions of L. kaempferi and L. olgensis on rhizosphere microbial communities at two different nitrogen levels. The results demonstrated clear differences in the beta-diversity and composition of bacteria and fungi among the three plantations, which implied the presence of different effects of plant-plant interactions on soil microbial communities. The results of the pot experiment showed that L. kaempferi suffered from greater neighbor effects from its conspecific neighbor regardless of N fertilization, although the effect declined when L. kaempferi was grown with L. olgensis under N fertilization. Changes in intra- and inter-specific plant interactions significantly impacted the chemical and biological properties of soil under N fertilization, with lower concentrations of NH4+, and lower soil microbial biomass (C-Mic) and soil carbon nitrogen biomass (N-Mic) under intra-specific plant interactions of L. kaempferi (KK) compared to inter-specific interactions of L. kaempferi and L. olgensis (KO). N fertilization increased bacterial and fungal alpha diversities in the rhizosphere soil of KO. For the beta diversity, the PERMANOVA results demonstrated that there was a significant impact of intra- and inter-specific plant interactions on soil microbial communities, with KK significantly differing from intra-specific plant interactions of L. olgensis (OO) and KO. The two plant species and N fertilization showed specific effects on the soil microbial composition, particularly on the fungal community. Both L. olgensis and N fertilization increased the abundance of Ascomycota but reduced that of Basidiomycota, and even shifted the dominance from Basidiomycota to Ascomycota under KO combined with N fertilization.Peer reviewe

EVALUATION OF DOWNY MILDEW (HYALOPERONOSPORA BRASSICAE) INFECTION SEVERITY ON DIFFERENT CRUCIFEROUS OILSEED CROPS

Diseases constitute an important economic problem in oilseed rape (Brassica napus) cultivation. Although downy mildew has been counted so far as a minor disease, under intensive cultivation system and short rotation interval, the impact of diseases could increase in the future, especially under predicted more humid northern climatic conditions. This research study is the first report about the severity of downy mildew infection on cruciferous crops in Estonia. During two years (2010 − 2011), downy mildew infection severity was assessed in six different cruciferous crops (B. napus, B. juncea, B. nigra, Sinapis alba, Raphanus sativus, Eruca sativa) in field trials located in Eerika, Tartu County, Estonia. On both study years, four disease assessments were done. Downy mildew infection started a week earlier in 2010, but the overall disease pressure was lower compared to 2011. Based on our field trial results, S. alba, E. sativa and R. sativus plants were significantly more resistant to downy mildew compared to other tested crops. Furthermore, in 2010 downy mildew symptoms were not recorded on two cruciferous species E. sativa and R. sativus. Brassica nigra and B. napus plants were the most susceptible to downy mildew, with especially severe infection in 2011. Based on our two years data, downy mildew can damage foliage on spring oilseed rape (B. napus) and black mustard (B. nigra) in a notable extent. We conclude that downy mildew is an important pathogen, which should be monitored on different oilseed cruciferous crops in Estonia

El rol dels terpens en la competència entre plantes invasores i natives a Hawaii

Els terpens, hidrocarburs derivats de l'isoprè, són emesos i emmagatzemats per moltes plantes. La seva funció biològica i ecològica és estudiada des de fa uns anys, havent estat proposades diverses possibles funcions, com per exemple la protecció davant dels herbívors o com a mecanisme antiestrès metabòlic. Investigacions realitzades per científics del CREAF a les illes Hawaii han permès detectar diferències en l'acumulació foliar de terpens entre les espècies nadiues i invasives a través de l'screening efectuat en una àmplia mostra de les principals espècies forestals natives i invasives a l'illa d'Oahu. Aquests resultats aporten noves pistes per conèixer els mecanismes que expliquen l'èxit competitiu que permet que moltes espècies introduïdes en un nou hàbitat esdevinguin un problema ecològic per la seva expansió i exclusió competitiva d'espècies nadiues.Los terpenos, hidrocarburos derivados del isopreno, son emitidos y almacenados por muchas plantas. Su función biológica y ecológica está siendo estudiada desde hace unos años, habiendo sido propuestas varias posibles funciones, como por ejemplo la protección frente a los herbívoros o como mecanismo antiestrés metabólico. Investigaciones realizadas por científicos del CREAF en las islas Hawai han permitido detectar diferencias en la acumulación foliar de terpenos entre las especies nativas e invasivas a través del screening efectuado en una amplia muestra de las principales especies forestales nativas y invasivas en la Isla de Oahu. Estos resultados aportan nuevas pistas para conocer los mecanismos que explican el éxito competitivo que permite que muchas especies introducidas en un nuevo hábitat se conviertan en un problema ecológico por su expansión y exclusión competitiva de especies nativas

Long-term dynamics of soil, tree stem and ecosystem methane fluxes in a riparian forest

Funding Information: This study was supported by the Ministry of Education and Science of Estonia (SF0180127s08 grant), the Estonian Research Council (IUT2-16, PRG-352, and MOBERC20), the Czech Science Foundation (17-18112Y), SustES - Adaptation strategies for sustainable ecosystem services and food security under adverse environmental conditions (CZ.02.1.01/0.0/0.0/16_019/0000797), the Ministry of Education, Youth and Sports of Czech Republic within the National Sustainability Program I (NPU I, grant number LO1415), the EU through the European Regional Development Fund (ENVIRON and EcolChange Centres of Excellence, Estonia, and MOBTP101 returning researcher grant by the Mobilitas Pluss programme), the European Social Fund (Doctoral School of Earth Sciences and Ecology). This work was also supported by Academy of Finland (294088, 288494), from the European Research Council (ERC) under the European Union?s Horizon 2020 research and innovation programme under grant agreement No [757695], and a Department of Energy (DOE) grant to JPM (DE-SC0008165). Funding Information: This study was supported by the Ministry of Education and Science of Estonia ( SF0180127s08 grant), the Estonian Research Council ( IUT2-16 , PRG-352 , and MOBERC20 ), the Czech Science Foundation ( 17-18112Y ), SustES - Adaptation strategies for sustainable ecosystem services and food security under adverse environmental conditions ( CZ.02.1.01/0.0/0.0/16_019/0000797 ), the Ministry of Education, Youth and Sports of Czech Republic within the National Sustainability Program I (NPU I, grant number LO1415 ), the EU through the European Regional Development Fund (ENVIRON and EcolChange Centres of Excellence, Estonia, and MOBTP101 returning researcher grant by the Mobilitas Pluss programme), the European Social Fund (Doctoral School of Earth Sciences and Ecology). This work was also supported by Academy of Finland ( 294088 , 288494 ), from the European Research Council (ERC) under the European Union‘s Horizon 2020 research and innovation programme under grant agreement No [ 757695 ], and a Department of Energy (DOE) grant to JPM ( DE-SC0008165 ). Publisher Copyright: © 2021 Elsevier B.V.The carbon (C) budgets of riparian forests are sensitive to climatic variability. Therefore, riparian forests are hot spots of C cycling in landscapes. Only a limited number of studies on continuous measurements of methane (CH4) fluxes from riparian forests is available. Here, we report continuous high-frequency soil and ecosystem (eddy-covariance; EC) measurements of CH4 fluxes with a quantum cascade laser absorption spectrometer for a 2.5-year period and measurements of CH4 fluxes from tree stems using manual chambers for a 1.5 year period from a temperate riparian Alnus incana forest. The results demonstrate that the riparian forest is a minor net annual sink of CH4 consuming 0.24 kg CH4-C ha−1 y−1. Soil water content is the most important determinant of soil, stem, and EC fluxes, followed by soil temperature. There were significant differences in CH4 fluxes between the wet and dry periods. During the wet period, 83% of CH4 was emitted from the tree stems while the ecosystem-level emission was equal to the sum of soil and stem emissions. During the dry period, CH4 was substantially consumed in the soil whereas stem emissions were very low. A significant difference between the EC fluxes and the sum of soil and stem fluxes during the dry period is most likely caused by emission from the canopy whereas at the ecosystem level the forest was a clear CH4 sink. Our results together with past measurements of CH4 fluxes in other riparian forests suggest that temperate riparian forests can be long-term CH4 sinks.Peer reviewe

Highly Diverse Phytophthora infestans Populations Infecting Potato Crops in Pskov Region, North-West Russia

There is limited understanding of the genetic variability in Phytophthora infestans in the major potato cultivation region of north-western Russia, where potato is grown primarily by small households with limited chemical treatment of late blight. In this study, the mating type, sensitivity to metalaxyl, and genotype and population genetic diversity (based on 12 simple sequence repeat (SSR) markers) of 238 isolates of P. infestans from the Pskov region during the years 2010–2013 were characterized. The aim was to examine the population structure, phenotypic and genotypic diversity, and the prevalent reproductive mode of P. infestans, as well as the influence of the location, time, and agricultural management practices on the pathogen population. The frequency of the A2 mating was stable over the four seasons and ranged from 33 to 48% of the sampled population. Both mating types occurred simultaneously in 90% of studied fields, suggesting the presence of sexual reproduction and oospore production in P. infestans in the Pskov region. Metalaxyl-sensitive isolates prevailed in all four years (72%), however, significantly fewer sensitive isolates were found in samples from large-scale conventional fields. A total of 50 alleles were detected in the 141 P. infestans isolates analyzed for genetic diversity. Amongst the 83 SSR multilocus genotypes (MLGs) detected, 65% were unique and the number of MLGs varied between locations from 3 to 20. These results, together with the high genotypic diversity observed in all the locations and the lack of significance of linkage disequilibrium, suggest that sexual recombination is likely responsible for the unique MLGs and the high genetic diversity found in the Pskov region population, resembling those of north-eastern European populations