Boolean networks with robust and reliable trajectories

We construct and investigate Boolean networks that follow a given reliable trajectory in state space, which is insensitive to fluctuations in the updating schedule, and which is also robust against noise. Robustness is quantified as the probability that the dynamics return to the reliable trajectory after a perturbation of the state of a single node. In order to achieve high robustness, we navigate through the space of possible update functions by using an evolutionary algorithm. We constrain the networks to having the minimum number of connections required to obtain the reliable trajectory. Surprisingly, we find that robustness always reaches values close to 100 percent during the evolutionary optimization process. The set of update functions can be evolved such that it differs only slightly from that of networks that were not optimized with respect to robustness. The state space of the optimized networks is dominated by the basin of attraction of the reliable trajectory.Comment: 12 pages, 9 figure

Scale-invariant statistics of period in directed earthquake network

A new law regarding structure of the earthquake networks is found. The seismic data taken in California is mapped to a growing directed network. Then, statistics of period in the network, which implies that after how many earthquakes an earthquake returns to the initial location, is studied. It is found that the period distribution obeys a power law, showing the fundamental difficulty of statistical estimate of period.Comment: 11 pages including 3 figure

Dynamical evolution of clustering in complex network of earthquakes

The network approach plays a distinguished role in contemporary science of complex systems/phenomena. Such an approach has been introduced into seismology in a recent work [S. Abe and N. Suzuki, Europhys. Lett. 65, 581 (2004)]. Here, we discuss the dynamical property of the earthquake network constructed in California and report the discovery that the values of the clustering coefficient remain stationary before main shocks, suddenly jump up at the main shocks, and then slowly decay following a power law to become stationary again. Thus, the network approach is found to characterize main shocks in a peculiar manner.Comment: 10 pages, 3 figures, 1 tabl

Modelling the Recoherence of Mesoscopic Superpositions in Dissipative Environments

A model is presented to describe the recently proposed experiment (J. Raimond, M. Brune and S. Haroche Phys. Rev. Lett {\bf 79}, 1964 (1997)) where a mesoscopic superposition of radiation states is prepared in a high-Q cavity which is coupled to a similar resonator. The dynamical coherence loss of such state in the absence of dissipation is reversible and can in principle be observed. We show how this picture is modified due to the presence of the environmental couplings. Analytical expressions for the experimental conditional probabilities and the linear entropy are given. We conclude that the phenomenon can still be observed provided the ratio between the damping constant and the inter-cavities coupling does not exceed about a few percent. This observation is favored for superpositions of states with large overlap.Comment: 13 pages, 6 figure

Ceruloplasmin revisited: structural and functional roles of various metal cation-binding sites

The three-dimensional molecular structure of human serum ceruloplasmin has been reinvestigated using X-ray synchrotron data collected at 100 K from a crystal frozen to liquid-nitrogen temperature

Renormalization Ambiguities and Conformal Anomaly in Metric-Scalar Backgrounds

We analyze the problem of the existing ambiguities in the conformal anomaly in theories with external scalar field in curved backgrounds. In particular, we consider the anomaly of self-interacting massive scalar field theory and of Yukawa model in the massless conformal limit. In all cases the ambiguities are related to finite renormalizations of a local non-minimal terms in the effective action. We point out the generic nature of this phenomenon and provide a general method to identify the theories where such an ambiguity can arise.Comment: RevTeX, 10 pages, no figures. Small comment and two references added. Accepted for publication in Physical Review

Time Evolution of tunneling and decoherence: soluble model

Decoherence effects associated to the damping of a tunneling two-level system are shown to dominate the tunneling probability at short times in strong coupling regimes in the context of a soluble model. A general decomposition of tunneling rates in dissipative and unitary parts is implemented. Master equation treatments fail to describe the model system correctly when more than a single relaxation time is involved

Criteria of authenticity in the rehabilitation of the industrial heritage in relation to the use/function in european countries with application in riverside south arch (Lisbon)

The paper presents the development of a set of authenticity criteria for the conservation of historic places. It aims to define criteria of authenticity regarding the use/function of the industrial heritage, validated by experts through the Delphi method. The case studies are European cases in Barcelona, Amsterdam, Manchester and Portuguese cases in the municipalities of Almada, Seixal and Barreiro and Arc Riverside South in Lisbon

Mitochondrial Ion Channels in Cancer Transformation

Cancer transformation involves reprograming of mitochondrial function to avert cell death mechanisms, monopolize energy metabolism, accelerate mitotic proliferation, and promote metastasis. Mitochondrial ion channels have emerged as promising therapeutic targets because of their connection to metabolic and apoptotic functions. This mini review discusses how mitochondrial channels may be associated with cancer transformation and expands on the possible involvement of mitochondrial protein import complexes in pathophysiological process