Numerical study of the ordering of the +-J XY spin-glass ladder

The properties of the domain-wall energy and of the correlation length are studied numerically for the one-dimensional +-J XY spin glass on the two-leg ladder lattice, focusing on both the spin and the chirality degrees of freedom. Analytic results obtained by Ney-Niftle et al for the same model were confirmed for asymptotically large lattices, while the approach to the asymptotic limit is slow and sometimes even non-monotonic. Attention is called to the occurrence of the SO(2)-Z_2 decoupling and its masking in spin correlations, the latter reflecting the inequality between the SO(2) and Z_2 exponents. Discussion is given concerning the behaviors of the higher-dimensional models.Comment: 14 pages, 10 figure

Numerical Studies of the Two Dimensional XY Model with Symmetry Breaking Fields

We present results of numerical studies of the two dimensional XY model with four and eight fold symmetry breaking fields. This model has recently been shown to describe hydrogen induced reconstruction on the W(100) surface. Based on mean-field and renormalization group arguments,we first show how the interplay between the anisotropy fields can give rise to different phase transitions in the model. When the fields are compatible with each other there is a continuous phase transition when the fourth order field is varied from negative to positive values. This transition becomes discontinuous at low temperatures. These two regimes are separated by a multicritical point. In the case of competing four and eight fold fields, the first order transition at low temperatures opens up into two Ising transitions. We then use numerical methods to accurately locate the position of the multicritical point, and to verify the nature of the transitions. The different techniques used include Monte Carlo histogram methods combined with finite size scaling analysis, the real space Monte Carlo Renormalization Group method, and the Monte Carlo Transfer Matrix method. Our numerical results are in good agreement with the theoretical arguments.Comment: 29 pages, HU-TFT-94-36, to appear in Phys. Rev. B, Vol 50, November 1, 1994. A LaTeX file with no figure

Transverse thermal depinning and nonlinear sliding friction of an adsorbed monolayer

We study the response of an adsorbed monolayer under a driving force as a model of sliding friction phenomena between two crystalline surfaces with a boundary lubrication layer. Using Langevin-dynamics simulation, we determine the nonlinear response in the direction transverse to a high symmetry direction along which the layer is already sliding. We find that below a finite transition temperature, there exist a critical depinning force and hysteresis effects in the transverse response in the dynamical state when the adlayer is sliding smoothly along the longitudinal direction.Comment: 4 pages, 4 figures, to appear in Phys. Rev. Let

The Atp-dependent Rna Helicase Hrpb Plays An Important Role In Motility And Biofilm Formation In Xanthomonas Citri Subsp Citri

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)RNA helicases are enzymes that catalyze the separation of double-stranded RNA (dsRNA) using the free energy of ATP binding and hydrolysis. DEAD/DEAH families participate in many different aspects of RNA metabolism, including RNA synthesis, RNA folding, RNA-RNA interactions, RNA localization and RNA degradation. Several important bacterial DEAD/DEAH-box RNA helicases have been extensively studied. In this study, we characterize the ATP-dependent RNA helicase encoded by the hrpB (XAC0293) gene using deletion and genetic complementation assays. We provide insights into the function of the hrpB gene in Xanthomonas citri subsp. citri by investigating the roles of hrpB in biofilm formation on abiotic surfaces and host leaves, cell motility, host virulence of the citrus canker bacterium and growth in planta. Results: The hrpB gene is highly conserved in the sequenced strains of Xanthomonas. Mutation of the hrpB gene (Delta hrpB) resulted in a significant reduction in biofilms on abiotic surfaces and host leaves. Delta hrpB also exhibited increased cell dispersion on solid medium plates. Delta hrpB showed reduced adhesion on biotic and abiotic surfaces and delayed development in disease symptoms when sprayed on susceptible citrus leaves. Quantitative reverse transcription-PCR assays indicated that deletion of hrpB reduced the expression of four type IV pili genes. The transcriptional start site of fimA (XAC3241) was determined using rapid amplification of 5'-cDNA Ends (5' RACE). Based on the results of fimA mRNA structure predictions, the fimA 5' UTR may contain three different loops. HrpB may be involved in alterations to the structure of fimA mRNA that promote the stability of fimA RNA. Conclusions: Our data show that hrpB is involved in adherence of Xanthomonas citri subsp. citri to different surfaces. In addition, to the best of our knowledge, this is the first time that a DEAH RNA helicase has been implicated in the regulation of type IV pili in Xanthomonas.16INCT CitrusCAPES/PSDE fellowship [99999.002657/2014-07]CNPqCoordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq

Association of caspase 3 activation and h2ax γ phosphorylation in the aging brain: Studies on untreated and irradiated mice

Phosphorylation of H2AX is a response to DNA damage, but γH2AX also associates with mitosis and/or apoptosis. We examined the effects of X-rays on DNA integrity to shed more light on the significance of H2AX phosphorylation and its relationship with activation of caspase 3 (CASP3), the main apoptotic effector. After administration of the S phase marker BrdU, brains were collected from untreated and irradiated (10 Gray) 24-month-old mice surviving 15 or 30 min after irradiation. After paraffin embedding, brain sections were single- or double-stained with antibodies against γH2AX, p53-binding protein 1 (53BP1) (which is recruited during the DNA damage response (DDR)), active CASP3 (cCASP3), 5-Bromo-2-deoxyuridine (BrdU), and phosphorylated histone H3 (pHH3) (which labels proliferating cells). After statistical analysis, we demonstrated that irradiation not only induced a robust DDR with the appearance of γH2AX and upregulation of 53BP1 but also that cells with damaged DNA attempted to synthesize new genetic material from the rise in BrdU immunostaining, with increased expression of cCASP3. Association of γH2AX, 53BP1, and cCASP3 was also evident in normal nonirradiated mice, where DNA synthesis appeared to be linked to disturbances in DNA repair mechanisms rather than true mitotic activity

Diluted Josephson-junction arrays in a magnetic field: phase coherence and vortex glass thresholds

The effects of random dilution of junctions on a two-dimensional Josephson-junction array in a magnetic field are considered. For rational values of the average flux quantum per plaquette $f$, the superconducting transition temperature vanishes, for increasing dilution, at a critical value $x_S(f)$, while the vortex ordering remains stable up to $x_{VL}>x_S$, much below the value $x_p$ corresponding to the geometric percolation threshold. For $x_{VL}<x<x_p$, the array behaves as a zero-temperature vortex-glass. Numerical results for $f=1/2$ from defect energy calculations are presented which are consistent with this scenario.Comment: 4 pages, 4 figures, to appear in Phys. Rev.

Dynamical transitions and sliding friction in the two-dimensional Frenkel-Kontorova model

The nonlinear response of an adsorbed layer on a periodic substrate to an external force is studied via a two dimensional uniaxial Frenkel-Kontorova model. The nonequlibrium properties of the model are simulated by Brownian molecular dynamics. Dynamical phase transitions between pinned solid, sliding commensurate and incommensurate solids and hysteresis effects are found that are qualitatively similar to the results for a Lennard-Jones model, thus demonstrating the universal nature of these features.Comment: 11 pages, 12 figures, to appear in Phys. Rev.

Glassy phases and driven response of the phase-field-crystal model with random pinning

We study the structural correlations and the nonlinear response to a driving force of a two-dimensional phase-field-crystal model with random pinning. The model provides an effective continuous description of lattice systems in the presence of disordered external pinning centers, allowing for both elastic and plastic deformations. We find that the phase-field crystal with disorder assumes an amorphous glassy ground state, with only short-ranged positional and orientational correlations even in the limit of weak disorder. Under increasing driving force, the pinned amorphous-glass phase evolves into a moving plastic-flow phase and then finally a moving smectic phase. The transverse response of the moving smectic phase shows a vanishing transverse critical force for increasing system sizes

GMOS Spectroscopy of SCUBA Galaxies Behind A851

We have identified counterparts to two submillimeter (submm) sources, SMM J09429+4659 and SMM J09431+4700, seen through the core of the z=0.41 cluster Abell 851. We employ deep 1.4-GHz observations and the far-infrared/radio correlation to refine the submm positions and then optical and near-infrared imaging to locate their counterparts. We identify an extremely red counterpart to SMM J09429+4659, while GMOS spectroscopy with Gemini-North shows that the R=23.8 radio source identified with SMM J09431+4700 is a hyperluminous infrared galaxy (L_FIR~1.5x10^13 L_sun) at z=3.35, the highest spectroscopic redshift so far for a galaxy discovered in the submm. The emission line properties of this galaxy are characteristic of a narrow-line Seyfert-1, although the lack of detected X-ray emission in a deep XMM-Newton observation suggests that the bulk of the luminosity of this galaxy is derived from massive star formation. We suggest that active nuclei, and the outflows they engender, may be an important part of the evolution of the brightest submm galaxies at high redshifts.Comment: to appear in the Oct 1 issue of ApJ Letter