Improving the dynamical overlap algorithm

We present algorithmic improvements to the overlap Hybrid Monte Carlo algorithm, including preconditioning techniques and improvements to the correction step, used when one of the eigenvalues of the Kernel operator changes sign, which is now O(\Delta t^2) exact.Comment: 6 pages, 3 figures; poster contribution at Lattice 2005(Algorithms and machines

Dynamical overlap simulations using HMC

We apply the Hybrid Monte Carlo method to the simulation of overlap fermions. We give the fermionic force for the molecular dynamics update. We present early results on a small dynamical chiral ensemble.Comment: Lattice2004(machines), 3 pages; references updated, minor changes to tex

Nucleon electromagnetic form factors from lattice QCD using a nearly physical pion mass

We present lattice QCD calculations of nucleon electromagnetic form factors using pion masses $m_\pi$ = 149, 202, and 254 MeV and an action with clover-improved Wilson quarks coupled to smeared gauge fields, as used by the Budapest-Marseille-Wuppertal collaboration. Particular attention is given to removal of the effects of excited state contamination by calculation at three source-sink separations and use of the summation and generalized pencil-of-function methods. The combination of calculation at the nearly physical mass $m_\pi$ = 149 MeV in a large spatial volume ($m_\pi L_s$ = 4.2) and removal of excited state effects yields agreement with experiment for the electric and magnetic form factors $G_E(Q^2)$ and $G_M(Q^2)$ up to $Q^2$ = 0.5 GeV$^2$.Comment: v2: published version; 30 pages, 25 figures, 6 table

A taxonomic study of the Spirillum lipoferum group, with descriptions of a new genus, Azospirillum gen. nov. and two species, Azospirillum lipoferum (Beijerinck) comb. nov. and Azospirillum brasilense sp. nov.

Sixty-one strains of the root-associated nitrogen fixer Spirillum lipoferum exhibited a similar morphology in peptone--succinate salts medium: vibrioid cells having a diameter of 1.0 micrometer. When grown in broth the cells had a single polar flagellum, but when grown on agar at 30 degrees C lateral flagella of shorter wavelength were also formed. The DNA base composition was 69--71 mol% guanine + cytosine when determined by thermal denaturation. DNA homology experiments indicated the occurrence of two distinct but related homology groups: 46 strains were in group I and 15 strains were in group II. Group II strains were distinguished by their ability to use glucose as a sole carbon source for growth in nitrogen-free medium, by their production of an acidic reaction in a peptone-based glucose medium, by their requirement for biotin, and by their formation of wider, longer, S-shaped or helical cells in semisolid nitrogen-free malate medium. The results indicate that two species exist, and on the basis of their characteristics it is proposed that they be assigned to a new genus, Azospirillum. Strians belonging to group II are named A. lipoferum (Beijerinck) comb. nov., while those belonging to group I are named A. brasilense sp. nov. Strain Sp 59b (ATCC29707) is proposed as the neotype strain for A. lipoferum, and strain Sp 7 (ATCC 29145) is proposed as the type strain for A. brasilense

Improving Inversions of the Overlap Operator

We present relaxation and preconditioning techniques which accelerate the inversion of the overlap operator by a factor of four on small lattices, with larger gains as the lattice size increases. These improvements can be used in both propagator calculations and dynamical simulations.Comment: lattice2004(machines

From Ji to Jaffe-Manohar orbital angular momentum in Lattice QCD using a direct derivative method

A Lattice QCD approach to quark orbital angular momentum in the proton based on generalized transverse momentum-dependent parton distributions (GTMDs) is enhanced methodologically by incorporating a direct derivative technique. This improvement removes a significant numerical bias that had been seen to afflict results of a previous study. In particular, the value obtained for Ji quark orbital angular momentum is reconciled with the one obtained independently via Ji's sum rule, validating the GMTD approach. Since GTMDs simultaneously contain information about the quark impact parameter and transverse momentum, they permit a direct evaluation of the cross product of the latter. They are defined through proton matrix elements of a quark bilocal operator containing a Wilson line; the choice in Wilson line path allows one to continuously interpolate from Ji to Jaffe-Manohar quark orbital angular momentum. The latter is seen to be significantly enhanced in magnitude compared to Ji quark orbital angular momentum, confirming previous results.Comment: 12 pages, 6 figure

Interferometric 12CO(J=2-1) image of the Nuclear Region of Seyfert 1 Galaxy NGC 1097

We have mapped the central region of the Seyfert 1 galaxy NGC 1097 in 12CO(J=2-1) with the Submillieter Array (SMA). The 12CO(J=2-1) map shows a central concentration and a surrounding ring, which coincide respectively with the Seyfert nucleus and a starburst ring. The line intensity peaks at the nucleus, whereas in a previously published 12CO(J=1-0) map the intensity peaks at the starburst ring. The molecular ring has an azimuthally averaged 12CO(J=2-1)/(J=1-0) intensity ratio (R21) of about unity, which is similar to those in nearby active star forming galaxies, suggesting that most of the molecular mass in the ring is involved in fueling the starburst. The molecular gas can last for only about 1.2\times10^8 years without further replenishment assuming a constant star formation rate and a perfect conversion of gas to stars. The velocity map shows that the central molecular gas is rotating with the molecular ring in the same direction, while its velocity gradient is much steeper than that of the ring. This velocity gradient of the central gas is similar to what is usually observed in some Seyfert 2 galaxies. To view the active nucleus directly in the optical, the central molecular gas structure can either be a low-inclined disk or torus but not too low to be less massive than the mass of the host galaxy itself, be a highly-inclined thin disk or clumpy and thick torus, or be an inner part of the galactic disk. The R21 value of ~1.9 of the central molecular gas component, which is significantly higher than the value found at the molecular gas ring, indicates that the activity of the Seyfert nucleus may have a significant influence on the conditions of the molecular gas in the central component.Comment: 22 pages, 4 figures, accepted by Ap