Morphological characteristics and distribution of Colletotrichum isolates morphotypes infecting mango (Mangifera indica L.) in the north of Côte d'Ivoire

Anthracnose caused by Colletotrichum species is the most important field and postharvest disease infecting mango worldwide. A survey was conducted in the seven mango producing districts in the north of Côte d'Ivoire to identify and characterize Colletotrichum species isolates associated with mango leaves necrosis and fruit rots. A total of 70 isolates were identified based on morphological and cultural characters. Most of isolate colour were grey or grey whitish (36%), cottony (71%) with cylindrical conidia (97%) rounded on both ends (57%). Three texture types were observed in colonies of the seventy isolates. Most of the isolates were cottony (71%) followed by abundant aspect (23%) and closely appressed (6%). According to conidia shape, two species of Colletotrichum; Colletotrichum gloeosporioides (97%) and C. acutatum(3%) were identified in the seventy isolates. Conidia length and width varied respectively from 15.4to 19.7μm and 4.8 to 5.2 μm. The Average Linear Growth Rate (ALGR) 7 days after culture varied from 0.76 to 0.91 cm day-1. Multivariate analysis grouped the 70 isolates into four morphotypes containing, respectively: 5 (7%), 7 (10%), 17 (24%) and 41 (59%) isolates. Isolates of morphotype 1 were characterized by whitish obverse and reverse colour with an abundant mycelia aerial aspect. The second morphotypes were represented by isolates with obverse and reverse brownish grey colour and contained both conidia with two rounded ends, and one rounded and one sharped ends. The third morphotype consisted of isolates with obverse and reverse grey whitish colour. The fourth morphotype consisted of isolates with obverse and reverse respectively dark grey and grey or vice versa. Conidial length and width of morphotypes varied, respectively, from 14.5 to 17.2 μm and 4.6 to 5.2 μm. ALGR of morphotypes varied from 0.84 to 0.87 μm day-1. The present study highlighted that morphological variation of Colletotrichum species existed among the different isolates and the districts surveyed. However, to overcome the inadequacies of this traditional morphological identification, sequence analyses are needed to be carried out to confirm the identity of these Colletotrichum species isolates

Diagnosis of neglected tropical diseases among patients with persistent digestive disorders (diarrhoea and/or abdominal pain >= 14 days): a multi-country, prospective, non-experimental case-control study (vol 15, 338, 2015)

Host-parasite interactio

Diagnosis of neglected tropical diseases among patients with persistent digestive disorders (diarrhoea and/or abdominal pain ≥14 days): Pierrea multi-country, prospective, non-experimental case-control study

Background: Diarrhoea still accounts for considerable mortality and morbidity worldwide. The highest burden is concentrated in tropical areas where populations lack access to clean water, adequate sanitation and hygiene. In contrast to acute diarrhoea (<14 days), the spectrum of pathogens that may give rise to persistent diarrhoea (≥14 days) and persistent abdominal pain is poorly understood. It is conceivable that pathogens causing neglected tropical diseases play a major role, but few studies investigated this issue. Clinical management and diagnostic work-up of persistent digestive disorders in the tropics therefore remain inadequate. Hence, important aspects regarding the pathogenesis, epidemiology, clinical symptomatology and treatment options for patients presenting with persistent diarrhoea and persistent abdominal pain should be investigated in multi-centric clinical studies. Methods/Design: This multi-country, prospective, non-experimental case-control study will assess persistent diarrhoea (≥14 days; in individuals aged ≥1 year) and persistent abdominal pain (≥14 days; in children/adolescents aged 1-18 years) in up to 2000 symptomatic patients and 2000 matched controls. Subjects from Côte d'Ivoire, Indonesia, Mali and Nepal will be clinically examined and interviewed using a detailed case report form. Additionally, each participant will provide a stool sample that will be examined using a suite of diagnostic methods (i.e., microscopic techniques, rapid diagnostic tests, stool culture and polymerase chain reaction) for the presence of bacterial and parasitic pathogens. Treatment will be offered to all infected participants and the clinical treatment response will be recorded. Data obtained will be utilised to develop patient-centred clinical algorithms that will be validated in primary health care centres in the four study countries in subsequent studies. Discussion: Our research will deepen the understanding of the importance of persistent diarrhoea and related digestive disorders in the tropics. A diversity of intestinal pathogens will be assessed for potential associations with persistent diarrhoea and persistent abdominal pain. Different diagnostic methods will be compared, clinical symptoms investigated and diagnosis-treatment algorithms developed for validation in selected primary health care centres. The findings from this study will improve differential diagnosis and evidence-based clinical management of digestive syndromes in the tropics. Trial registration: ClinicalTrials.gov; identifier: NCT02105714