SYNTHESIS, CHARACTERIZATION AND ANTIMICROBIAL STUDIES OF SOME LANTHANIDE (III) COMPLEXES WITH A TRIDENTATE ONO DONOR SCHIFF BASE LIGAND

Some new lanthanide(III) complexes- La(III), Ce(III), Pr(III) and Nd(III) have been synthesised from Schiff base ligand 4-{[(2-hydroxyphenyl)imino]methyl}-1,5-dimethyl-2-phenyl-1,2-dihydro-3H-pyrazol-3-one (L1) whose precursors are 4-antipyrine carboxaldehyde and 2-aminophenol. The metal to ligand ratio (1:2) and the general formula [Ln(L1)2(NO3)2]NO3 were established by elemental analysis, conductivity measurements, spectral techniques such as IR, UV-Visible, 1H NMR as well as magnetic susceptibility measurements. L1 behave as a neutral tridentate (ONO) ligand and Ln(III) ion display coordination number eight in all complexes. The Schiff base and complexes were screened for their in vitro antimicrobial activities against selected human pathogenic bacteria by agar disc diffusion method. Most of the synthesized complexes were found to be more potent bactericides than the corresponding free ligand

Thermodynamic structure of the Atmospheric Boundary Layer over the Arabian Sea and the Indian Ocean during pre-INDOEX and INDOEX-FFP campaigns

Spatial and temporal variability of the Marine Atmospheric Boundary Layer (MABL) height for the Indian Ocean Experiment (INDOEX) study period are examined using the data collected through Cross-chained LORAN (Long-Range Aid to Navigation) Atmospheric Sounding System (CLASS) launchings during the Northern Hemispheric winter monsoon period. This paper reports the results of the analyses of the data collected during the pre-INDOEX (1997) and the INDOEX-First Field Phase (FFP; 1998) in the latitude range 14°N to 20°S over the Arabian Sea and the Indian Ocean. Mixed layer heights are derived from thermodynamic profiles and they indicated the variability of heights ranging from 400m to 1100m during daytime depending upon the location. Mixed layer heights over the Indian Ocean are slightly higher during the INDOEX-FFP than the pre-INDOEX due to anomalous conditions prevailing during the INDOEX-FFP. The trade wind inversion height varied from 2.3km to 4.5km during the pre-INDOEX and from 0.4km to 2.5km during the INDOEX-FFP. Elevated plumes of polluted air (lofted aerosol plumes) above the marine boundary layer are observed from thermodynamic profiles of the lower troposphere during the INDOEX-FFP. These elevated plumes are examined using 5-day back trajectory analysis and show that one group of air mass travelled a long way from Saudi Arabia and Iran/Iraq through India before reaching the location of measurement, while the other air mass originates from India and the Bay of Bengal

Environmental set-up and tidal propagation in a tropical estuary with dual connection to the sea (SW Coast of India)

The Kochi Backwater (KB) is the second largest wetland system in India. It is connected to the sea at Fort Kochi and Munambam (Pallipuram) (30 km north of Kochi). As the tide is forced through two openings, its propagation in the backwater system is very complicated, particularly in the northern arm of the estuary. Using synchronous water level (WL) and current measurements in the KB from a network of stations during 2007-2008, it was convenient to demarcate the northern KB into two distinct regions according to the tidal forcing from the north (Pallipuram) and south (Vallarpadam). This demarcation is useful for computing the propagation speeds of the dominant tidal constituents in the northern branch of the KB with dual opening for opposing tides. WL variations indicated that M 2 tide (Principal lunar semidiurnal constituent) dominated in the sea level variance, followed by the K 1 constituent (Luni-solar declinational diurnal constituent). The M 2 tidal influence was the strongest near the mouth and decayed in the upstream direction. The propagation speed of the M 2 tide in the southern estuary was ~3.14 m/s. The ratio of the total annual runoff to the estuarine volume is ~42 that indicates the estuary will be flushed 42 times in a year. KB can be classified as a monsoonal estuary where the river discharge exhibits large seasonal variation

Toxic Metals Enrichment in the Surficial Sediments of a Eutrophic Tropical Estuary (Cochin Backwaters, Southwest Coast of India)

Concentrations and distributions of trace metals (Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, and Zn) in surficial sediments of the Cochin backwaters were studied during both monsoon and pre-monsoon periods. Spatial variations were in accordance with textural charaterstics and organic matter content. A principal component analysis distinguished three zones with different metal accumulation capacity: (i) highest levels in north estuary, (ii) moderate levels in central zone, and (iii) lowest levels in southern part. Trace metal enrichments are mainly due to anthropogenic contribution of industrial, domestic, and agricultural effluents, whose effect is enhanced by settling of metals due to organic flocculation and inorganic precipitation associated with salinity changes. Enrichments factors using Fe as a normalizer showed that metal contamination was the product of anthropogenic activities. An assessment of degree of pollution-categorized sediments as moderately polluted with Cu and Pb, moderately-to-heavily polluted with Zn, and heavily-to-extremely polluted with Cd. Concentrations at many sites largely exceed NOAA ERL (e.g., Cu, Cr, and Pb) or ERM (e.g., Cd, Ni, and Zn). This means that adverse effects for benthic organisms are possible or even highly probable

A different approach to soil analysis: Indicative studies

Soil analysis is a tool that has been employed with the primary goal of providing recommendations for soil rectification, crop productivity and for soil health management. Time tested methods like ammonium acetate extraction and diethylene triamine penta acetic acid (DTPA) are commonly used for analysis of bioavailable nutrients. However, there are some limitations to these methods as both extraction fluids are buffered to neutral or near-neutral pH. Hence extracted nutrients represent a “potential or ideal-case” fertility status of soil instead of an “actual” field status. In the ‘Regular methods’, we are overlooking the role of pH, the master variable, in determining the availability of nutrients. Hence, in ‘Modified methods’, the extraction fluid is buffered to actual soil pH. Results obtained with over 150 random samples representing a range of pH, have indicated a difference in values between regular and modified extraction methods. The modified methods (MM) of ammonium acetate and DTPA extraction adjusted to soil pH were found to be better than regular method (RM) for estimation of calcium, magnesium with ammonium acetate and iron and manganese with DTPA in alkaline soils above pH 8.0. For a complete picture of soil health, productivity and fertility, microbiological and enzymatic analysis of soils were included in the present study. Soil solution equivalent medium (SSE) was found to be the appropriate culture medium for microbial counts. A linear relationship was found between urease activity and available nitrogen of soil

PCR diagnosis of tick-borne pathogens in Maharashtra state, India indicates fitness cost associated with carrier infections is greater for crossbreed than native cattle breeds

Tick-borne pathogens (TBP) are responsible for significant economic losses to cattle production, globally. This is particularly true in countries like India where TBP constrain rearing of high yielding Bos taurus, as they show susceptibility to acute tick borne disease (TBD), most notably tropical theileriosis caused by Theileria annulata. This has led to a programme of cross breeding Bos taurus (Holstein-Friesian or Jersey) with native Bos indicus (numerous) breeds to generate cattle that are more resistant to disease. However, the cost to fitness of subclinical carrier infection in crossbreeds relative to native breeds is unknown, but could represent a significant hidden economic cost. In this study, a total of 1052 bovine blood samples, together with associated data on host type, sex and body score, were collected from apparently healthy animals in four different agro-climatic zones of Maharashtra state. Samples were screened by PCR for detection of five major TBPs: T. annulata, T. orientalis, B. bigemina, B. bovis and Anaplasma spp.. The results demonstrated that single and co-infection with TBP are common, and although differences in pathogen spp. prevalence across the climatic zones were detected, simplistic regression models predicted that host type, sex and location are all likely to impact on prevalence of TBP. In order to remove issues with autocorrelation between variables, a subset of the dataset was modelled to assess any impact of TBP infection on body score of crossbreed versus native breed cattle (breed type). The model showed significant association between infection with TBP (particularly apicomplexan parasites) and poorer body condition for crossbreed animals. These findings indicate potential cost of TBP carrier infection on crossbreed productivity. Thus, there is a case for development of strategies for targeted breeding to combine productivity traits with disease resistance, or to prevent transmission of TBP in India for economic benefit

Role of Heterozygous APC Mutation in Niche Succession and Initiation of Colorectal Cancer – A Computational Study

Mutations in the adenomatous polyposis coli (APC) gene are found in most colorectal cancers. They cause constitutive activation of proliferative pathways when both alleles of the gene are mutated. However studies on individuals with familial adenomatous polyposis (FAP) have shown that a single mutated APC allele can also create changes in the precancerous colon crypt, like increased number of stem cells, increased crypt fission, greater variability of DNA methylation patterns, and higher somatic mutation rates. In this paper, using a computational model of colon crypt dynamics, we evolve and investigate a hypothesis on the effect of heterozygous APC mutation that explains these different observations. Based on previous reports and the results from the computational model we propose the hypothesis that heterozygous APC mutation has the effect of increasing the chances for a stem cell to divide symmetrically, producing two stem cell daughters. We incorporate this hypothesis into the model and perform simulation experiments to investigate the consequences of the hypothesis. Simulations show that this hypothesis links together the changes in FAP crypts observed in previous studies. The simulations also show that an APC+/− stem cell gets selective advantages for dominating the crypt and progressing to cancer. This explains why most colon cancers are initiated by APC mutation. The results could have implications for preventing or retarding the onset of colon cancer in people with inherited or acquired mutation of one APC allele. Experimental validation of the hypothesis as well as investigation into the molecular mechanisms of this effect may therefore be worth undertaking