The Extraordinary Importance of Coral-Associated Fauna

Coral reefs are one of the most diverse marine ecosystems on Earth and one of the richest in terms of species interactions. Scleractinian corals are usually the most likely to provide numerous different habitats and to support many symbiotic relationships. However, many other invertebrate groups, such as sponges, bryozoans, and other cnidarians, establish strict symbiotic relationships with other marine organisms. Despite the nature of these relationships—as well as the factors that drive their establishment—being unclear in most cases, a few studies have already shown that some associations may increase the resistance of their hosts to external disturbances. Thus, the potential ability of each member of these diverse symbiotic assemblages to influence the fitness and long-term survival of their hosts bring the coral-associated fauna to the top of the list of coral reef studies. Unfortunately, the widespread degradation of coral reef ecosystems may threaten the existence of the intimate relationships that may go unrecognized complicating our understanding of the intricate networks connecting the fates of reef species. Therefore, this unprecedented loss of biodiversity calls for synergic conservation and monitoring actions aimed at significantly increasing our efforts to search for and describe as much of the diversity of coral-associated organisms as possible, shedding new light on the complex, elusive mechanisms controlling coral reef functioning

Nestedness for Dummies (NeD): A User-Friendly Web Interface for Exploratory Nestedness Analysis

Recent theoretical advances in nestedness analysis have led to the introduction of several alternative metrics to overcome most of the problems biasing the use of matrix 'temperature' calculated by Atmar's Nestedness Temperature Calculator. However, all of the currently available programs for nestedness analysis lack the user friendly appeal that has made the Nestedness Temperature Calculator one of the most popular community ecology programs. The software package NeD is an intuitive open source application for nestedness analysis that can be used online or locally under different operating systems. NeD is able to automatically handle different matrix formats, has batch functionalities and produces an output that can be easily copied and pasted to a spreadsheet. In addition to numerical results, NeD provides a graphic representation of the matrix under examination and of the corresponding maximally packed matrix. NeD allows users to select among the most used nestedness metrics, and to combine them with different null models. Integrating easiness of use with the recent theoretical advances in the field, NeD provides researchers not directly involved in theoretical debates with a simple yet robust statistical tool for a more conscious performance of nestedness analysis. NeD can be accessed at http: //purl.oclc.org/ned

Feeding behavior of <i>Coralliophila</i> sp. on corals affected by Caribbean Ciliate Infection (CCI):A new possible vector?

Coral reefs in the Caribbean are known to be affected by many coral diseases, yet the ecology and etiology of most diseases remain understudied. The Caribbean ciliate infection (CCI) caused by ciliates belonging to the genus Halofolliculina is a common disease on Caribbean reefs, with direct contact considered the most likely way through which the ciliates can be transmitted between infected and healthy colonies. Here we report an observation regarding a Coralliophila sp. snail feeding in proximity to a cluster of ciliates forming the typical disease band of CCI. The result of this observation is twofold. The feeding behavior of the snail may allow the passive attachment of ciliates on the body or shell of the snail resulting in indirect transport of the ciliates among colonies, which makes it eligible as a possible disease vector. Alternatively, the lesions created from snail feeding may enhance the progression of the ciliates already present on the coral as well as promoting additional infections allowing pathogens to enter through the feeding scar

Assessing population collapse of Drupella spp. (Mollusca: Gastropoda) 2 years after a coral bleaching event in the Republic of Maldives

AbstractCorallivory causes considerable damage to coral reefs and can exacerbate other disturbances. Among coral predators, Drupella spp. are considered as delayer of coral recovery in the Republic of Maldives, although little information is available on their ecology. Thus, we aimed to assess their population structure, feeding behaviour and spatial distribution around 2 years after a coral bleaching event in 2016. Biological and environmental data were collected using belt and line intercept transects in six shallow reefs in Maldives. The snails occurred in aggregations with a maximum of 62 individuals and exhibited a preference for branching corals. Yet, the gastropods showed a high plasticity in adapting feeding preferences to prey availability. Drupella spp. were homogenously distributed in the study area with an average of 9.04 ± 19.72 ind/200 m2. However, their occurrence was significantly different at the reef scale with the highest densities found in locations with higher coral cover. The impact of Drupella spp. appeared to be minimal with the population suffering from the loss of coral cover. We suggest that monitoring programs collect temporal- and spatial-scale data on non-outbreaking populations or non-aggregating populations to understand the dynamics of predation related to the co-occurrence of anthropogenic and natural impacts

A non-lethal SPME-LC/MS method for the analysis of plastic-associated contaminants in coral reef invertebrates

Current approaches to evaluate microplastic contamination of the marine environment include the use of marine organisms as bioindicators and the detection of plastic-associated contaminants in their tissues. Liquid/liquid extraction and/or solid-phase extraction are the usual methods of choice for sample preparation. However, these methods suffer from background contamination, due to the large volume of solvents used and the ubiquity of plasticizers in laboratory environments. Moreover, organisms used in the study may belong to species that are rare or endangered and these should preferably not be sacrificed as a consequence of the relatively sizeable biological material required for exhaustive sample extractions and the destructive nature of mass spectrometry analysis. In this study, we evaluated, as a non-lethal alternative, a procedure involving solid phase microextraction (SPME) coupled with liquid chromatography mass spectrometry (LC/MS) analysis. Two coral reef invertebrates that may be sensitive to microplastic contamination were used for the tests, i.e., the scleractinian Danafungia scruposa and the bivalve mollusk Tridacna maxima. The results showed that the method was effective in quantifying phthalate esters within ten minutes of exposure, offering at the same time an improved control of the background contamination compared to the classical extraction procedure

Widespread occurrence of a rarely known association between the hydrocorals <i>Stylaster roseus</i> and <i>Millepora alcicornis</i> at Bonaire, southern Caribbean

Among symbiotic associations, cases of pseudo-auto-epizoism, in which a species uses a resembling but not directly related species as substrate, are poorly documented in coral reef ecosystems. In the present study, we assessed the distribution of an association between the hydrocoralsStylaster roseusandMillepora alcicornison about 50% of coral reef sites studied in Bonaire, southern Caribbean. Although previously thought to be uncommon, associations between the lace coralS. roseusand the fire coralM. alcicorniswere observed at both the windward and leeward sides of Bonaire, mainly between 15 and 25 m depth, reaching a maximum occupation of 47S. roseuscolonies on a singleM. alcicorniscolony. Both species' tissues did not show any signs of injuries, while an in-depth inspection of the contact points of their skeletons revealed that both partners can partially overgrow each other. How it is possible thatS. roseusis able to settle on the stinging tissue ofMilleporaas well as how, by contrast, the latter may facilitate the lace coral by offering a certain degree of protection are questions that deserve further investigations

The first report on detecting SARS-CoV-2 inside bacteria of the human gut microbiome: A case series on asymptomatic family members and a child with COVID-19

Many studies report the importance of using feces as source sample for detecting SARS-CoV-2 in patients with COVID-19 symptoms but who are negative to oropharyngeal/ nasopharyngeal tests. Here, we report the case of an asymptomatic child whose family members had negative results with the rapid antigen nasopharyngeal swab tests. The 21-month-old child presented with fever, diarrhea, bilateral conjunctivitis, and conspicuous lacrimation. In this study, analysis for the presence of SARS-CoV-2 in fecal samples by using Luminex technology allowed accurate detection of the presence of the viral RNA in the feces of the child and of all her relatives, which thus resulted to be positive but asymptomatic. It is the first time that SARS-CoV-2- is observed inside bacteria of the human gut microbiome and outside a matrix resembling extracellular bacterial lysates, in agreement with a bacteriophage mechanism with the images obtained by transmission electron microscopy (TEM), post-embedding immunogold, and by fluorescence microscope. In addition to the typical observations of respiratory symptoms, accurate evaluation of clinical gastrointestinal and neurological symptoms, combined with efficient highly sensitive molecular testing on feces, represent an efficient approach for detecting SARS-CoV-2, and for providing the correct therapy in challenging COVID-19 cases, like the one here reported

The first report on detecting SARS-CoV-2 inside human fecal-oral bacteria: A case series on asymptomatic family members and a child with COVID-19

Many studies report the importance of using feces as source sample for detecting SARS-CoV-2 in patients with COVID-19 symptoms but who are negative to oropharyngeal/ nasopharyngeal tests. Here, we report the case of an asymptomatic child whose family members had negative results with the rapid antigen nasopharyngeal swab tests. The 21-month-old child presented with fever, diarrhea, bilateral conjunctivitis, and conspicuous lacrimation. In this study, analysis for the presence of SARS-CoV-2 in fecal samples by using Luminex technology allowed accurate detection of the presence of the viral RNA in the feces of the child and of all her relatives, which thus resulted to be positive but asymptomatic. It is the first time that SARS-CoV-2- is observed inside human fecal-oral bacteria and outside a matrix resembling extracellular bacterial lysates, in agreement with a bacteriophage mechanism with the images obtained by transmission electron microscopy (TEM), post-embedding immunogold, and by fluorescence microscope. In addition to the typical observations of respiratory symptoms, accurate evaluation of clinical gastrointestinal and neurological symptoms, combined with efficient highly sensitive molecular testing on feces, represent an efficient approach for detecting SARS-CoV-2, and for providing the correct therapy in challenging COVID-19 cases, like the one here reported

Ecological dependencies make remote reef fish communities most vulnerable to coral loss

yEcosystems face both local hazards, such as over-exploitation, and global hazards, such as climate change. Since the impact of local hazards attenuates with distance from humans, local extinction risk should decrease with remoteness, making faraway areas safe havens for biodiversity. However, isolation and reduced anthropogenic disturbance may increase ecological specialization in remote communities, and hence their vulnerability to secondary effects of diversity loss propagating through networks of interacting species. We show this to be true for reef fish communities across the globe. An increase in fish-coral dependency with the distance of coral reefs from human settlements, paired with the far-reaching impacts of global hazards, increases the risk of fish species loss, counteracting the benefits of remoteness. Hotspots of fish risk from fish-coral dependency are distinct from those caused by direct human impacts, increasing the number of risk hotspots by similar to 30% globally. These findings might apply to other ecosystems on Earth and depict a world where no place, no matter how remote, is safe for biodiversity, calling for a reconsideration of global conservation priorities.Peer reviewe

Global tropical reef fish richness could decline by around half if corals are lost

Reef fishes are a treasured part of marine biodiversity, and also provide needed protein for many millions of people. Although most reef fishes might survive projected increases in ocean temperatures, corals are less tolerant. A few fish species strictly depend on corals for food and shelter, suggesting that coral extinctions could lead to some secondary fish extinctions. However, secondary extinctions could extend far beyond those few coral-dependent species. Furthermore, it is yet unknown how such fish declines might vary around the world. Current coral mass mortalities led us to ask how fish communities would respond to coral loss within and across oceans. We mapped 6964 coral-reef-fish species and 119 coral genera, and then regressed reef-fish species richness against coral generic richness at the 1 degrees scale (after controlling for biogeographic factors that drive species diversification). Consistent with small-scale studies, statistical extrapolations suggested that local fish richness across the globe would be around half its current value in a hypothetical world without coral, leading to more areas with low or intermediate fish species richness and fewer fish diversity hotspots.Peer reviewe