AN ANTIMICROBIAL PHTHALATE DERIVATIVE FROM BACILLUS CEREUS, THE SYMBIOTIC BACTERIUM ASSOCIATED WITH A NOVEL ENTOMOPATHOGENIC NEMATODE, RHABDITIS (OSCHEIUS) SP

Objective: To isolate and identify the bioactive metabolites from the culture filtrates of a bacterium (Bacillus cereus) symbiotically associated with a novel entomopathogenic nematode Rhabditis (Oscheius) species.Methods: The bacterium was cultured in three different media and the antimicrobial activity was determined by the well diffusion assay. The ethyl acetate extract of the cell free culture filtrate was then purified by silica gel column chromatography and thin layer chromatography. Identification of the active metabolite was done with HPLC, GC-MS and LC-MS.Results: The cell free culture filtrate of a nematode symbiotic bacterium showed both antibacterial and antifungal activities. Fermentation conditions were standardized and optimum antibacterial activity was observed in tryptic soy broth at 72 h of incubation at 30 °C. When the ethyl acetate extract was purified by silica gel column chromatography and thin layer chromatography, an active fraction was obtained which was subjected to HPLC analysis along with GC-MS and LC-MS leading to the identification of a major compound Bis (2-ethyl hexyl) phthalate. The compound was active against Gram positive bacteria Bacillus subtilis MTCC2756, Staphylococus aureus MTCC902, Gram negative bacteria Escherichia coli MTCC 2622 and fungi such as Aspergillus flavus MTCC277, Candida albicans MTCC183, Fusarium oxysporum MTCC 284, Rhizoctonia solani MTCC 4634.Conclusion: Bis (2-ethyl hexyl) phthalate was identified as one of the metabolites produced by a nematode symbiotic bacterium associated with a novel entomopathogenic nematode Rhabditis (Oscheius) species. Thus similar compounds isolated from novel entomopathogenic bacteria would pave the way for identifying new drugs for the pharmaceutical and agricultural sector.Â

Isolation, identification and culture of the marine rotifer Colurella adriatica Ehrenberg, 1831 (Family: Lepadellidae) from Andaman & Nicobar Islands: A promising live feed for larval rearing of high value shellfishes and finfishes

An extremely small rotifer was isolated from the micro zooplankton samples collected during February, 2014 from Havelock islands of Andaman and Nicobar Islands. The species was identified as Colurella adriatica Ehrenberg, 1831 (Family: Lapadellidae). Its lorica length under culture period ranged from 47.530 to 98.868 μm and width from 34.308 to 56.277 μm. The size of the eggs, neonates and adults are also documented. Comparison of size of C. adriatica with Brachionus plicatilis (L type) and B. rotundiformis (S and SS type) revealed that C. adriatica is smaller in length and width than the SS-type rotifer which is currently used as a first feed in marine tropical fish larval rearing. However, the larvae of many marine food fishes including groupers and high value marine ornamental fishes are unable to consume the SS-type rotifers as a first feed due to their extremely small mouth gape. The culture of C. adriatica was carried out using Nannochloropsis oculata Diet-I), N. oculata and yeast (0.01g/litre) (Diet-II), Yeast (0.01g/litre) alone (Diet-III). Average population density of C. adriatica with these diets reached a maximum of 1000 nos. of individuals /ml on 10th day of culture on feeding with Diet-I; 950 nos. /ml on 14th day (Diet-II) and 650 nos. /ml on 15th day of culture (Diet-III). Diet I &II and Diet II &III did not show any significant difference (P>0.05) whereas, Diet I and III showed significant difference (P<0.01). Preliminary studies of C. adriatica as a feed to the larvae of Stenopus hispidus, Lysmata amboinensis and Pomacentrus caeruleus showed better survival than larvae fed with B. routundiformis during first phase of larval rearing

Oral contrast radiography evaluation in adhesive intestinal obstruction

Background: Adhesive small bowel obstruction (ASBO) is a common cause for admission in the surgery casualty. Non-operative management is initially recommended unless there is suspicion of complication, but its optimal duration is controversial. The aims of this study were to evaluate the usefulness of radiographic small bowel examination with contrast medium to predict the need for surgery in ASBO and to decrease late-surgery morbidity.Methods: This prospective observational study was carried out in a tertiary apex institute in Kerala, India enrolling 50 patients with clinical and radiological features of adhesive SBO. The past surgical history, as well as clinical picture, blood tests and radiological findings in these patients were studied. Fifty millilitres of 5% barium suspension were given via naso-gastric tube, and plain abdominal radiographs were taken at 6 and 24 hours afterwards. The primary variable assessed was the presence/absence of contrast in right colon. Surgical intervention was decided upon, based on the treating surgeon's discretion.Results: In 36 patients, barium contrast appeared in the right colon. In the remaining 14 patients, no evidence of barium contrast in the right colon was seen, and 8 of them underwent surgery, while the other 6 were treated conservatively. There was a statistical significant relationship (p<0.01) between the presence of contrast medium in the right colon and being treated conservatively. There was also a statistically significant (p<0.05) relationship between index case being one for malignancy and undergoing laparotomy for ASBO in the study.Conclusions: Early oral administration of a radiological contrast medium in patients with adhesive small bowel obstruction can effectively predict the need for a surgical procedure. It can shorten not only hospital stay, but also the potential morbidity of late surgery, secondary to a prolonged and unsuccessful non-operative treatment

Mutant generation of Mms2 and structural analysis of modeled Uev1a N-terminus docked to Uev1a-Ubc13-CHIP heterotrimer

Mms2, a Ubiquitin-conjugating enzyme variant (UEV) protein acts aco-factor for Ubc13 in DNA damage repair. This signaling is mediated by assembly of Lys-63 linked poly- ubiquitin chains by Ubc13 and Mms2 complex. Uev1A, another UEV in conjugation with Ubc13 forms Lys-63 poly-ubiquitin chains which lead to activation of NF-kB pathway. Hence, in the presence of different cofactors, Ubc13 performs distinct biological functions. Mms2 and Uev1A were found to have a sequence similarity of more than 90%. This project aims at generating five mutants of Mms2 by changing the residues to that of Uev1A and studying their interaction with Ubc1

Evidence for Molecular Evolutionary Conservedness of Small Heat-Shock Protein Sequence in Solanaceaeous Crops Using in silico Methods

Drought and heat contribute to much of the yield decline in agricultural lands all over the world. The basic physiological responses developed against drought and heat stress overlie each other, as; both these stresses eventually lead to dehydration of the cell and to osmotic imbalance. To cope with abiotic stresses, it is necessary to understand plant responses to stresses that disturb homeostatic equilibrium at the cellular and molecular level. Although there has been remarkable progress in this with development of microarray-based expression profiling methods (together with genomic sequence data), understanding on ways to employ these data to engineer plants with improved stresstolerance is still at a nascent stage. However, these data can be used for discovering genes, functional microsatellites and regulatory elements using&nbsp;in silico&nbsp;methods. In this context, single nucleotide repeat marker sequences have been identified which is associated with small heat-shock protein sequence (sHSP) for heat tolerance in&nbsp;Capsicum annuum. These sHSP sequences have some structural features in common; its characteristic is that it is homologous and highly conserved. These sequences have been analyzed for molecular evolutionary conservedness in solanaceaeous crops and have been found to have a single nucleotide repeat sequence and a highly conserved sHSP sequence

Marine ornamental fishes and their breeding: CMFRI initiatives

The marine ornamental fish trade is a sunrise industry in aquaculture and has become a growing industry worldwide. As a result the trade of marine ornamentals has been expanding in recent years and has grown into a multimillion dollar enterprise mainly due to the emergence of modern aquarium gadgets and technologies for setting and maintenance of miniature reef aquaria. Since the marine ornamental trade is operated throughout the tropics, the global marine ornamental trade is estimated at US$ 200- 330 million. Since India is endowed with a vast resource potential of marine ornamentals distributed in the coral seas and rocky coasts with patchy coral formations and the increasing the demand in the domestic trade, it appears very much lucrative for India to venture into this industry

Evaluation of hypolipidemic effect of Tinospora cordifolia in cholesterol diet induced hyperlipidemia in rats

Background: There is always a need for developing novel drugs with higher efficacy and fewer side effects. Though statins are generally well-tolerated drugs for hyperlipidemia with high efficacy they are not free from adverse effects. Herbal drugs are well known for their cost-effectiveness and minimal side effects. Tinospora cordifolia (T. cordifolia) is one such plant with known hypolipidemic activity and wide availability in India. Hence this study is an attempt to verify and evaluate the extent of efficacy of T. cordifolia as a hypolipidemic agent. The objective of the study is to compare the hypolipidemic activity of aqueous root extract of T. cordifolia with that of Rosuvastatin in cholesterol diet-induced hyperlipidemia in rats.Methods: Hyperlipidemia was induced in male albino rats of wistar strain in the first 30 days of feeding period and continued in the next 30 days of treatment period. Aqueous root extract of T. cordifolia (2.5 and 5g/kg, per oral) was administered as test drug in the treatment period. Rosuvastatin (10 mg/kg,      per oral) was used as the standard drug. Serum lipid profile, atherogenic index and body weights were estimated for all rats on the day before the start of the feeding period and on day 0, 15 and 30 of the treatment period. The results were analyzed statistically using student’s unpaired and paired t-test wherever applicable.Results: Serum lipid levels showed significant reduction (p <0.001) in TC,TG, LDL-C and VLDL-C with significant elevation (p <0.001) of HDL-C in both the rosuvastatin and test groups, but the percentage reduction in lipid levels, percentage elevation of HDL-C and percentage protection from atherosclerosis was higher in rosuvastatin group than in test groups.Conclusions: T.cordifolia has a definite hypolipidemic potential. Although its effectiveness is lesser than rosuvastatin its beneficial role as hypolipidemic agent may be tested in clinical studies

Evaluation of hypolipidemic effect of Tinospora cordifolia in cholesterol diet induced hyperlipidemia in rats

Background: There is always a need for developing novel drugs with higher efficacy and fewer side effects. Though statins are generally well-tolerated drugs for hyperlipidemia with high efficacy they are not free from adverse effects. Herbal drugs are well known for their cost-effectiveness and minimal side effects. Tinospora cordifolia (T. cordifolia) is one such plant with known hypolipidemic activity and wide availability in India. Hence this study is an attempt to verify and evaluate the extent of efficacy of T. cordifolia as a hypolipidemic agent. The objective of the study is to compare the hypolipidemic activity of aqueous root extract of T. cordifolia with that of Rosuvastatin in cholesterol diet-induced hyperlipidemia in rats.Methods: Hyperlipidemia was induced in male albino rats of wistar strain in the first 30 days of feeding period and continued in the next 30 days of treatment period. Aqueous root extract of T. cordifolia (2.5 and 5g/kg, per oral) was administered as test drug in the treatment period. Rosuvastatin (10 mg/kg,      per oral) was used as the standard drug. Serum lipid profile, atherogenic index and body weights were estimated for all rats on the day before the start of the feeding period and on day 0, 15 and 30 of the treatment period. The results were analyzed statistically using student’s unpaired and paired t-test wherever applicable.Results: Serum lipid levels showed significant reduction (p <0.001) in TC,TG, LDL-C and VLDL-C with significant elevation (p <0.001) of HDL-C in both the rosuvastatin and test groups, but the percentage reduction in lipid levels, percentage elevation of HDL-C and percentage protection from atherosclerosis was higher in rosuvastatin group than in test groups.Conclusions: T.cordifolia has a definite hypolipidemic potential. Although its effectiveness is lesser than rosuvastatin its beneficial role as hypolipidemic agent may be tested in clinical studies

Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis

Abiotic stress often causes a series of morphological, physiological, biochemical and molecular changes that affect plant growth, development and productivity. To cope with abiotic stresses, it is necessary to understand plant responses to stresses that disturb homeostatic equilibrium at the cellular and molecular level. Genomic information on&nbsp;Capsicum annuum&nbsp;has been explored to identify microsatellite markers associated with abiotic stress tolerance and assign them to cognate functional groups related to specific stress responses. Several in silico methods have been used to identify simple sequence repeats associated with stress responsive gene candidates in&nbsp;Capsicum annuum. In this study, a microsatellite marker has been identified in&nbsp;Capsicum annuum&nbsp;associated with Nucleoside Diphosphate Kinase (NDK) having multiple environmental stress tolerance (oxidative, high temperature and salt stress) and which is also highly conserved in crops of Solanaceae. These are house-keeping enzymes that maintain intracellular levels of all nucleoside triphosphates (NTP) with the exception of adenosine triphosphate (ATP). These are also involved in phytochrome A response, UV-B signaling, auxin responses and oxidative stress signaling