Dynamics of Cyclic Feedback Systems

The dynamics of cyclic feedback systems are described. The emphasis is both in showing the diversity of possible dynamics in these sytems and in showing that there is a underlying dynamic structure possessed by all these systems. In particular. for the special class of monotone cyclic feedback systems. the dynamics is fairly simple; the recurrent sets can only consist of fixed points or periodic orbits and in many cases can be shown to be Morse-Smale. This is contrasted with the general cyclic feedback systems for which chaotic dynamics can occur

Structure of force networks in tapped particulate systems of disks and pentagons. II. Persistence analysis

In the companion paper [Pugnaloni, Phys. Rev. E 93, 062902 (2016)10.1103/PhysRevE.93.062902], we use classical measures based on force probability density functions (PDFs), as well as Betti numbers (quantifying the number of components, related to force chains, and loops), to describe the force networks in tapped systems of disks and pentagons. In the present work, we focus on the use of persistence analysis, which allows us to describe these networks in much more detail. This approach allows us not only to describe but also to quantify the differences between the force networks in different realizations of a system, in different parts of the considered domain, or in different systems. We show that persistence analysis clearly distinguishes the systems that are very difficult or impossible to differentiate using other means. One important finding is that the differences in force networks between disks and pentagons are most apparent when loops are considered: the quantities describing properties of the loops may differ significantly even if other measures (properties of components, Betti numbers, force PDFs, or the stress tensor) do not distinguish clearly or at all the investigated systems.Instituto de Física de Líquidos y Sistemas Biológico

Structure of force networks in tapped particulate systems of disks and pentagons : I. Clusters and loops

The force network of a granular assembly, defined by the contact network and the corresponding contact forces, carries valuable information about the state of the packing. Simple analysis of these networks based on the distribution of force strengths is rather insensitive to the changes in preparation protocols or to the types of particles. In this and the companion paper [Kondic, Phys. Rev. E 93, 062903 (2016)10.1103/PhysRevE.93.062903], we consider two-dimensional simulations of tapped systems built from frictional disks and pentagons, and study the structure of the force networks of granular packings by considering network's topology as force thresholds are varied. We show that the number of clusters and loops observed in the force networks as a function of the force threshold are markedly different for disks and pentagons if the tangential contact forces are considered, whereas they are surprisingly similar for the network defined by the normal forces. In particular, the results indicate that, overall, the force network is more heterogeneous for disks than for pentagons. Such differences in network properties are expected to lead to different macroscale response of the considered systems, despite the fact that averaged measures (such as force probability density function) do not show any obvious differences. Additionally, we show that the states obtained by tapping with different intensities that display similar packing fraction are difficult to distinguish based on simple topological invariants.Instituto de Física de Líquidos y Sistemas Biológico

Rigorous numerics for symmetric connecting orbits: Even homoclinics of the Gray-Scott equation

In this paper we propose a rigorous numerical technique for the computation of symmetric connecting orbits for ordinary differential equations. The idea is to solve a projected boundary value problem (BVP) in a function space via a fixed point argument. The formulation of the projected BVP involves a high order parameterization of the invariant manifolds at the steady states. Using this parameterization, one can obtain explicit exponential asymptotic bounds for the coefficients of the expansion of the manifolds. Combining these bounds with piecewise linear approximations, one can construct a contraction in a function space whose unique fixed point corresponds to the wanted connecting orbit. We have implemented the method to demonstrate its effectiveness, and we have used it to prove the existence of a family of even homoclinic orbits for the Gray-Scott equation

The Conley Index and Rigorous Numerics for Attracting Periodic Orbits

Despite the enormous number of papers devoted to the problem of the exis-tence of periodic trajectories of differential equations, the theory is still far from being satisfactory, especially when concrete differential equations are concerned, because the necessary conditions formulated in many theoretica

Structure of force networks in tapped particulate systems of disks and pentagons : I. Clusters and loops

The force network of a granular assembly, defined by the contact network and the corresponding contact forces, carries valuable information about the state of the packing. Simple analysis of these networks based on the distribution of force strengths is rather insensitive to the changes in preparation protocols or to the types of particles. In this and the companion paper [Kondic, Phys. Rev. E 93, 062903 (2016)10.1103/PhysRevE.93.062903], we consider two-dimensional simulations of tapped systems built from frictional disks and pentagons, and study the structure of the force networks of granular packings by considering network's topology as force thresholds are varied. We show that the number of clusters and loops observed in the force networks as a function of the force threshold are markedly different for disks and pentagons if the tangential contact forces are considered, whereas they are surprisingly similar for the network defined by the normal forces. In particular, the results indicate that, overall, the force network is more heterogeneous for disks than for pentagons. Such differences in network properties are expected to lead to different macroscale response of the considered systems, despite the fact that averaged measures (such as force probability density function) do not show any obvious differences. Additionally, we show that the states obtained by tapping with different intensities that display similar packing fraction are difficult to distinguish based on simple topological invariants.Instituto de Física de Líquidos y Sistemas Biológico

Structure of force networks in tapped particulate systems of disks and pentagons. II. Persistence analysis

In the companion paper [Pugnaloni, Phys. Rev. E 93, 062902 (2016)10.1103/PhysRevE.93.062902], we use classical measures based on force probability density functions (PDFs), as well as Betti numbers (quantifying the number of components, related to force chains, and loops), to describe the force networks in tapped systems of disks and pentagons. In the present work, we focus on the use of persistence analysis, which allows us to describe these networks in much more detail. This approach allows us not only to describe but also to quantify the differences between the force networks in different realizations of a system, in different parts of the considered domain, or in different systems. We show that persistence analysis clearly distinguishes the systems that are very difficult or impossible to differentiate using other means. One important finding is that the differences in force networks between disks and pentagons are most apparent when loops are considered: the quantities describing properties of the loops may differ significantly even if other measures (properties of components, Betti numbers, force PDFs, or the stress tensor) do not distinguish clearly or at all the investigated systems.Instituto de Física de Líquidos y Sistemas Biológico

Chaotic self-similar wave maps coupled to gravity

We continue our studies of spherically symmetric self-similar solutions in the SU(2) sigma model coupled to gravity. For some values of the coupling constant we present numerical evidence for the chaotic solution and the fractal threshold behavior. We explain this phenomenon in terms of horseshoe-like dynamics and heteroclinic intersections.Comment: 25 pages, 17 figure