Bioinformatics and the Undergraduate Curriculum Essay

Recent advances involving high-throughput techniques for data generation and analysis have made familiarity with basic bioinformatics concepts and programs a necessity in the biological sciences. Undergraduate students increasingly need training in methods related to finding and retrieving information stored in vast databases. The rapid rise of bioinformatics as a new discipline has challenged many colleges and universities to keep current with their curricula, often in the face of static or dwindling resources. On the plus side, many bioinformatics modules and related databases and software programs are free and accessible online, and interdisciplinary partnerships between existing faculty members and their support staff have proved advantageous in such efforts. We present examples of strategies and methods that have been successfully used to incorporate bioinformatics content into undergraduate curricula

Advances in optical sensing of explosive vapours

This project has received funding from the European Union’s Seventh Framework Programme for research, technological development and demonstration under agreement no 284747, and the EPSRC under EP/K503940/1, EP/K503162/1, and EP/N509759/1. IDWS acknowledges a Royal Society Wolfson Research Merit Award.Optical techniques for the detection of explosives are receiving increasing interest due to potentially fast responding, highly-sensitive systems. Conjugated polymers are suitable probe materials for this application since their fluorescence is quenched by electronegative materials including explosives. This can be used to make a sensor for explosive vapour, which can then give chemical information to help identify explosive devices, and complements other approaches such as metal detectors and ground penetrating radar. Whilst the principle has been known for some time, its practical implementation requires considerable development of instrumentation and materials, including preconcentration materials. This paper reports our current efforts to address these challenges, with particular emphasis on humanitarian demining and looking towards application in Improvised Explosive Device (IED) detection.Publisher PD

Sensing of explosive vapor by hybrid perovskites : effect of dimensionality

Funding: Engineering and Physical Sciences Research Council under grants EP/T01119X/1 and EP/K503940/1, and the NATO Science for Peace & Security programme under grant agreement MYP G5355.Lead halide perovskites are very promising materials for many optoelectronic devices. They are low cost, photostable, and strongly photoluminescent materials, but so far have been little studied for sensing. In this article, we explore hybrid perovskites as sensors for explosive vapor. We tune the dimensionality of perovskite films in order to modify their exciton binding energy and film morphology and explore the effect on sensing response. We find that tuning from the 3D to the 0D regime increases the PL quenching response of perovskite films to the vapor of dinitrotoluene (DNT)—a molecule commonly found in landmines. We find that films of 0D perovskite nanocrystals work as sensitive and stable sensors, with strong PL responses to DNT molecules at concentrations in the parts per billion range. The PL quenching response can easily be reversed, making the sensors reusable. We compare the response to several explosive vapors and find that the response is strongest for DNT. These results show that hybrid perovskites have great potential for vapor sensing applications.Publisher PDFPeer reviewe

Towards conversational technology to promote, monitor and protect mental health

This paper presents a general overview of the H2020-MSCA-RISE project MENHIR (Mental health monitoring through interactive conversations), which aim is to explore the possibilities of conversational technologies (chatbots) to understand, promote and protect mental health and assist people with anxiety and mild depression manage their conditions. MENHIR started on February 2019 and will have a duration of 4 years. Its consortium brings together 8 partners including universities, anon-profit organization and companies

Explosive vapour sensing with organic and hybrid semiconductors

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Impact of counselling on quality of life and sleep in cancer patients

It has been acknowledged that poor quality of sleep significantly correlates with poor quality of life; evidence suggests that counselling has a positive impact not only on the cancer patient's quality of life, but also on family members and friends. The aim of this service evaluation was to determine if there was an improvement in clients’ quality of life and sleep patterns following counselling as offered by a local cancer charity. A total of 60 matched pre- and post-counselling questionnaires were completed and subjected to statistical analysis. When considering quality of life, in the domains of Role Emotional, Mental Health and Mental Component Summary Score, it can be concluded that counselling has a positive effect on emotional health and mental wellbeing. The mean total number of hours sleep per night significantly increased from 6 hours sleep per night at baseline to 6.8 hours sleep per night at the completion of counselling (p=0.005) showing clients gained an extra 48 minutes sleep per night. The improved emotional and mental wellbeing alongside the extra 48 minutes sleep per night provides evidence that there is a positive outcome for those patients and families who use counselling services. Nurses and other members of the multidisciplinary team should be encouraged to discuss supportive therapies with patients and those affected by cancer at all stages of the cancer trajectory, regardless of social status, gender or cancer type. </jats:p

Improved organic semiconductor explosive sensors for application on minefields

Here we present progress made in the development of an organic semiconductor based sensor system for explosive vapours. The sensors, originally developed in the TIRAMISU project, monitor a change in fluorescence from a polymer film when it is exposed to trace vapours of TNT and similar explosives. The approach could be promising for applications in remote explosive scent trace (REST detection) for the technical survey of mine fields. Successful deployment of the detection system in the field, however, requires an improved method for sample collection and delivery to the sensor, and an approach to address the potential problem of false detectionof distractants. We report here recent progress addressing these challenges