学会抄録

A description of the results of the cross platform (385 K CGH and SNP50 chip) verification of CNV regions [72, 73]. (PDF 8 kb

RNA-seq expression count data for T. bifasciatum gonad

RNA-seq expression data for three male and three female bluehead wrasse (T. bifasciatum) gonad samples. Data is presented as a table of raw read counts per transcript (rows) in each sample (columns), processed in RSEM

Additional file 5: of The distribution and impact of common copy-number variation in the genome of the domesticated apple, Malus x domestica Borkh

List of resistance (R) gene models located within copy-number variable regions (CNVRs) in the apple genome. (XLSX 10 kb

Additional file 3: of The distribution and impact of common copy-number variation in the genome of the domesticated apple, Malus x domestica Borkh

Per chromosome summary of copy-number variable regions (CNVRs) in the apple genome. (XLSX 10 kb

Sex-Specific Locus Management

This zip file includes the commands to process data in Stacks, then isolate and visualise sex-specific loci. The files utilised by these commands are included in an "associated files" folder

Isolation and Alignment of Male-specific Loci

This zip file includes the BLAST matches of our especially male-specific loci (individual frequency greater than or equal to 36 males). We ordered and tested primer pairs for the best 10 matches among these (NZFS loci 1-10)

Additional file 7:ďťż of Histological and transcriptomic effects of 17Îą-methyltestosterone on zebrafish gonad development

Genes differentially expressed by 2-fold or more in MT-treated testes compared to ovaries. (XLS 3834kb

Ample weil divisors

We define and study positivity (nefness, amplitude, bigness and pseudo-effectiveness) for Weil divisors on normal projective varieties. We prove various characterizations, vanishing and non-vanishing theorems for cohomology, global generations statements, and a result related to log Fano

Statistical Threshold Scripts

This zip file includes the commands to determine the SSLT and SSAT for RRS data (to be run in R). The files we input into these commands are included in the "associated files" folder

Additional file 1: Table S1. of Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish

Ensembl zebrafish gene IDs of sex-biased contigs in the gonad for GO and pathway enrichment analysis in DAVID