Serum nitric oxide and homocysteine as biomarkers of ectopic pregnancy

Background: Aim of current study was to evaluate the role of serum homocysteine and nitric oxide in the diagnosis of ectopic pregnancy.Methods: The study included 32 patients with ruptured ectopic, 29 miscarriage patients and 30 normal pregnant women as controls. Fasting plasma homocysteine, serum folate, vitamin B12 levels and nitric oxide levels were estimated at the time of admission.Results: Plasma homocysteine levels were significantly lower in patients with ectopic pregnancy than normal pregnancy. Nitric oxide levels were significantly lower in patients with abortion.Conclusions: Patients with abortion have decreased circulating nitric oxide levels in serum while those with ectopic pregnancies have decreased homocysteine levels.

Cephalopods

Cephalopods include squids, cuttlefishes and octopuses and are commercially exploited all along the Indian coast. These were once thrown overboard as discards but the demand from export trade in the mid-seventies induced the fishers to save these catches. Since then the production has been rapidly increasing and the present annual production is around 100,000 tonnes. The cephalopods contribute to about 4% of total marine landings. They account for about 10% by value of the total marine products exported. There are about 80 species recorded from Indian waters but only a dozen are of commercial importanc

Biology of squids

This section is. based on the data collected in the squid jigging survey made by two vessels, M.F.V. Matsya Sugandhi and M.V. Blue Fin on the southwest coast of India during the 9-month period from June 19&& to February 19&9. The data were collected onboard by the scientists of CMFRI who partici;>ated in the survey. Three species of squids were jigged during the survey, and to understand some aspects of the biology of each of these species a general idea about their distribution and Telative abundance in space and time is necessary. For this' purpose, a one-degree square where jigging was done during the period is taken as a unit area

Trophic level of fishes occurring along the Indian coast

Data on the trophic level (TrL) of 707 species of exploited finfishes, crustaceans and cephalopods along the Indian coast were collected from different sources. The TrL ranges from 2.0 to 4.7 and the mean TrL is 3.5. The mean TrL of pelagic finfishes is 3.68, and the TrL decreased towards demersal habitat (3.44). A strong positive correlation exists between maximum body length of finfishes and TrL. The mean TrL of exploitation was 3.25. The complexities of assigning TrL values are discussed

Lipoprotein lipase is active as a monomer

Lipoprotein lipase (LPL), the enzyme that hydrolyzes triglycerides in plasma lipoproteins, is assumed to be active only as a homodimer. In support of this idea, several groups have reported that the size of LPL, as measured by density gradient ultracentrifugation, is ∼110 kDa, twice the size of LPL monomers (∼55 kDa). Of note, however, in those studies the LPL had been incubated with heparin, a polyanionic substance that binds and stabilizes LPL. Here we revisited the assumption that LPL is active only as a homodimer. When freshly secreted human LPL (or purified preparations of LPL) was subjected to density gradient ultracentrifugation (in the absence of heparin), LPL mass and activity peaks exhibited the size expected of monomers (near the 66-kDa albumin standard). GPIHBP1-bound LPL also exhibited the size expected for a monomer. In the presence of heparin, LPL size increased, overlapping with a 97.2-kDa standard. We also used density gradient ultracentrifugation to characterize the LPL within the high-salt and low-salt peaks from a heparin-Sepharose column. The catalytically active LPL within the high-salt peak exhibited the size of monomers, whereas most of the inactive LPL in the low-salt peak was at the bottom of the tube (in aggregates). Consistent with those findings, the LPL in the low-salt peak, but not that in the high-salt peak, was easily detectable with single mAb sandwich ELISAs, in which LPL is captured and detected with the same antibody. We conclude that catalytically active LPL can exist in a monomeric state

Development of decadal (1985–1995–2005) land use and land cover database for India

India has experienced significant Land-Use and Land-Cover Change (LULCC) over the past few decades. In this context, careful observation and mapping of LULCC using satellite data of high to medium spatial resolution is crucial for understanding the long-term usage patterns of natural resources and facilitating sustainable management to plan, monitor and evaluate development. The present study utilizes the satellite images to generate national level LULC maps at decadal intervals for 1985, 1995 and 2005 using onscreen visual interpretation techniques with minimum mapping unit of 2.5 hectares. These maps follow the classification scheme of the International Geosphere Biosphere Programme (IGBP) to ensure compatibility with other global/regional LULC datasets for comparison and integration. Our LULC maps with more than 90% overall accuracy highlight the changes prominent at regional level, i.e., loss of forest cover in central and northeast India, increase of cropland area in Western India, growth of peri-urban area, and relative increase in plantations. We also found spatial correlation between the cropping area and precipitation, which in turn confirms the monsoon dependent agriculture system in the country. On comparison with the existing global LULC products (GlobCover and MODIS), it can be concluded that our dataset has captured the maximum cumulative patch diversity frequency indicating the detailed representation that can be attributed to the on-screen visual interpretation technique. Comparisons with global LULC products (GlobCover and MODIS) show that our dataset captures maximum landscape diversity, which is partly attributable to the on-screen visual interpretation techniques. We advocate the utility of this database for national and regional studies on land dynamics and climate change research. The database would be updated to 2015 as a continuing effort of this study

Recon 2.2: from reconstruction to model of human metabolism.

IntroductionThe human genome-scale metabolic reconstruction details all known metabolic reactions occurring in humans, and thereby holds substantial promise for studying complex diseases and phenotypes. Capturing the whole human metabolic reconstruction is an on-going task and since the last community effort generated a consensus reconstruction, several updates have been developed.ObjectivesWe report a new consensus version, Recon 2.2, which integrates various alternative versions with significant additional updates. In addition to re-establishing a consensus reconstruction, further key objectives included providing more comprehensive annotation of metabolites and genes, ensuring full mass and charge balance in all reactions, and developing a model that correctly predicts ATP production on a range of carbon sources.MethodsRecon 2.2 has been developed through a combination of manual curation and automated error checking. Specific and significant manual updates include a respecification of fatty acid metabolism, oxidative phosphorylation and a coupling of the electron transport chain to ATP synthase activity. All metabolites have definitive chemical formulae and charges specified, and these are used to ensure full mass and charge reaction balancing through an automated linear programming approach. Additionally, improved integration with transcriptomics and proteomics data has been facilitated with the updated curation of relationships between genes, proteins and reactions.ResultsRecon 2.2 now represents the most predictive model of human metabolism to date as demonstrated here. Extensive manual curation has increased the reconstruction size to 5324 metabolites, 7785 reactions and 1675 associated genes, which now are mapped to a single standard. The focus upon mass and charge balancing of all reactions, along with better representation of energy generation, has produced a flux model that correctly predicts ATP yield on different carbon sources.ConclusionThrough these updates we have achieved the most complete and best annotated consensus human metabolic reconstruction available, thereby increasing the ability of this resource to provide novel insights into normal and disease states in human. The model is freely available from the Biomodels database (http://identifiers.org/biomodels.db/MODEL1603150001)

Oceanic squids - their distribution, abundance and potential in the EEZ of India and contiguous seas

FORV Sagar Sampada collected a good number of oceanic squids belonging to several families from the Indian EEZ and contiguous seas. Of these, the most important species was the purpleback flying squid Symplectoteuthis oualaniensis which forms a potential oceanic squid resource. This species was caught in pelagic trawl at depths up to.200-250 m from surface in the oceanic areas. Though the squid is known to be distributed throughout India's oceanic waters, it frequently occurred in comparatively more abundance, up to 318 squids per haul, in the northneastem Arabian Sea. There was wide variation in the size of this squid (from 20 mm to 472 mm), the largest individual weighing 4.5 kg. The diamondback squid Thysanoteuthis rhombus, the largest specimen of which measured 585 mm in length and 5.3 kg in weight, was also caught from a few stations. Besides these large species, several others belonging to families such as Onychoteuthidae, Histioteuthidae, Enoploteuthidae and Cranchiidae are also distributed in the EEZ. A large number of oceanic squids were collected at night, which is indicative of their diel vertical migration towards surface layers during night hours