29 research outputs found
Spatial fluctuations at vertices of epithelial layers: quantification of regulation by Rho pathway
In living matter, shape fluctuations induced by acto-myosin are usually
studied in vitro via reconstituted gels, whose properties are controlled by
changing the concentrations of actin, myosin and cross-linkers. Such an
approach deliberately avoids to consider the complexity of biochemical
signaling inherent to living systems. Acto-myosin activity inside living cells
is mainly regulated by the Rho signaling pathway which is composed of multiple
layers of coupled activators and inhibitors. We investigate how such a pathway
controls the dynamics of confluent epithelial tissues by tracking the
displacements of the junction points between cells. Using a phenomenological
model to analyze the vertex fluctuations, we rationalize the effects of
different Rho signaling targets on the emergent tissue activity by quantifying
the effective diffusion coefficient, the persistence time and persistence
length of the fluctuations. Our results reveal an unanticipated correlation
between layers of activation/inhibition and spatial fluctuations within
tissues. Overall, this work connects the regulation via biochemical signaling
with mesoscopic spatial fluctuations, with potential application to the study
of structural rearrangements in epithelial tissues.Comment: 8 pages, 3 figure
Can fingernail quality predict bone damage in Type 2 diabetes mellitus? a pilot study
Type 2 diabetes mellitus (T2DM) adversely affects the normal functioning, intrinsic material properties, and structural integrity of many tissues, including bone. It is well known that the clinical utility of areal bone mineral density (aBMD) is limited to assess bone strength in individuals with T2DM. Therefore, there is a need to explore new diagnostic techniques that can better assist and improve the accuracy of assessment of bone tissue quality. The present study investigated the link between bone and fingernail material/compositional properties in type 2 diabetes mellitus (T2DM). For that, femoral head and fingernail samples were obtained from twenty-five adult female patients (with/without T2DM) with fragility femoral neck fractures undergoing hemi/total hip arthroplasty. Cylindrical cores of trabecular bone were subjected to micro-CT, and lower bone volume fraction was observed in the diabetic group than the non-diabetic group due to fewer and thinner trabeculae in individuals with T2DM. The material and compositional properties of bone/fingernail were estimated using nanoindentation and Fourier Transform Infrared Spectroscopy, respectively. Both bone/fingernails in T2DM had lower reduced modulus (Er), hardness (H), lower Amide I and Amide II area ratio (protein content), higher sugar-to-matrix ratio, and relatively high carboxymethyl-lysine (CML) content compared with non-diabetic patients. Sugar-to-matrix ratio and relative CML content were strongly and positively correlated with HbA1c for both bone/fingernail. There was a positive correlation between bone and fingernail glycation content. Our findings provide evidence that the degradation pattern of bone and fingernail properties go hand-in-hand in individuals with T2DM. Hence, the fingernail compositional/material properties might serve as a non-invasive surrogate marker of bone quality in T2DM; however, further large-scale studies need to be undertaken
The long-time dynamics of two hydrodynamically-coupled swimming cells
Swimming micro-organisms such as bacteria or spermatozoa are typically found
in dense suspensions, and exhibit collective modes of locomotion qualitatively
different from that displayed by isolated cells. In the dilute limit where
fluid-mediated interactions can be treated rigorously, the long-time
hydrodynamics of a collection of cells result from interactions with many other
cells, and as such typically eludes an analytical approach. Here we consider
the only case where such problem can be treated rigorously analytically, namely
when the cells have spatially confined trajectories, such as the spermatozoa of
some marine invertebrates. We consider two spherical cells swimming, when
isolated, with arbitrary circular trajectories, and derive the long-time
kinematics of their relative locomotion. We show that in the dilute limit where
the cells are much further away than their size, and the size of their circular
motion, a separation of time scale occurs between a fast (intrinsic) swimming
time, and a slow time where hydrodynamic interactions lead to change in the
relative position and orientation of the swimmers. We perform a multiple-scale
analysis and derive the effective dynamical system - of dimension two -
describing the long-time behavior of the pair of cells. We show that the system
displays one type of equilibrium, and two types of rotational equilibrium, all
of which are found to be unstable. A detailed mathematical analysis of the
dynamical systems further allows us to show that only two cell-cell behaviors
are possible in the limit of , either the cells are attracted to
each other (possibly monotonically), or they are repelled (possibly
monotonically as well), which we confirm with numerical computations
Colloids in a bacterial bath: simulations and experiments
We present a joint experimental and computational study of the effect of
bacterial motion on micron-scale colloids contained in a two-dimensional
suspension of Bacillus subtilis. With respect to previous work using E. coli,
here we introduce a novel experimental set-up that allows us to realise a
two-dimensional bacterial suspension insensitive to either evaporation or fluid
flow. By analysing the mean square displacements of both bacteria and colloids,
we confirm the existence of a crossover from super-diffusive behaviour at short
time scales to normal diffusion at longer times. We also study the same
two-dimensional system by means of numerical simulations, using a suspension of
self-propelled dumbbells or the Vicsek model, which has been previously used to
study the dynamics of active particles. Our numerical results obtained with
both models are in broad agreement with the experimental trends, but only the
dumbbell simulations can match the experimental data quantitatively. The level
of agreement we find suggest that steric interactions due to collisions are
important players in determining collective motion of the bacterial bath, and
should complement hydrodynamic interactions in experiments
The collective dynamics of self-propelled particles
We propose a method for the dynamic simulation of a collection of self-propelled particles in a viscous Newtonian fluid. We restrict attention to particles whose size and velocity are small enough that the fluid motion is in the creeping flow regime. We propose a simple model for a self-propelled particle, and extended the Stokesian Dynamics method to conduct dynamic simulations of a collection of such particles. In our description, each particle is treated as a sphere with an orientation vector p, whose locomotion is driven by the action of a force dipole Sp of constant magnitude S0 at a point slightly displaced from its centre. To simplify the calculation, we place the dipole at the centre of the particle, and introduce a virtual propulsion force Fp to effect propulsion. The magnitude F0 of this force is proportional to S0. The directions of Sp and Fp are determined by p. In isolation, a self-propelled particle moves at a constant velocity u0 p, with the speed u0 determined by S0. When it coexists with many such particles, its hydrodynamic interaction with the other particles alters its velocity and, more importantly, its orientation. As a result, the motion of the particle is chaotic. Our simulations are not restricted to low particle concentration, as we implement the full hydrodynamic interactions between the particles, but we restrict the motion of particles to two dimensions to reduce computation. We have studied the statistical properties of a suspension of self-propelled particles for a range of the particle concentration, quantified by the area fraction φa. We find several interesting features in the microstructure and statistics. We find that particles tend to swim in clusters wherein they are in close proximity. Consequently, incorporating the finite size of the particles and the near-field hydrodynamic interactions is of the essence. There is a continuous process of breakage and formation of the clusters. We find that the distributions of particle velocity at low and high φa are qualitatively different; it is close to the normal distribution at high φa, in agreement with experimental measurements. The motion of the particles is diffusive at long time, and the self-diffusivity decreases with increasing φa. The pair correlation function shows a large anisotropic build-up near contact, which decays rapidly with separation. There is also an anisotropic orientation correlation near contact, which decays more slowly with separation. Movies are available with the online version of the paper
Anomalous Stress Profile in a Sheared Granular Column
We present measurements of the stress as a function of vertical position in a column of granular material sheared in a cylindrical Couette device. All three components of the stress tensor on the outer cylinder were measured as a function of distance from the free surface at shear rates low enough that the material was in the dense, slow flow regime. We find that the stress profile differs fundamentally from that of fluids, from the predictions of plasticity theories, and from intuitive expectation. We argue that the anomalous stress profile is due to an anisotropic fabric caused by the combined action of gravity and shear