Detecting the Rise and Fall of 21 cm Fluctuations with the Murchison Widefield Array

We forecast the sensitivity with which the Murchison Widefield Array (MWA) can measure the 21 cm power spectrum of cosmic hydrogen, using radiative transfer simulations to model reionization and the 21 cm signal. The MWA is sensitive to roughly a decade in scale (wavenumbers of k ~ 0.1 - 1 h Mpc^{-1}), with foreground contamination precluding measurements on larger scales, and thermal detector noise limiting the small scale sensitivity. This amounts primarily to constraints on two numbers: the amplitude and slope of the 21 cm power spectrum on the scales probed. We find, however, that the redshift evolution in these quantities can yield important information about reionization. Although the power spectrum differs substantially across plausible models, a generic prediction is that the amplitude of the 21 cm power spectrum on MWA scales peaks near the epoch when the intergalactic medium (IGM) is ~ 50% ionized. Moreover, the slope of the 21 cm power spectrum on MWA scales flattens as the ionization fraction increases and the sizes of the HII regions grow. Considering detection sensitivity, we show that the optimal MWA antenna configuration for power spectrum measurements would pack all 500 antenna tiles as close as possible in a compact core. The MWA is sensitive enough in its optimal configuration to measure redshift evolution in the slope and amplitude of the 21 cm power spectrum. Detecting the characteristic redshift evolution of our models will confirm that observed 21 cm fluctuations originate from the IGM, and not from foregrounds, and provide an indirect constraint on the volume-filling factor of HII regions during reionization. After two years of observations under favorable conditions, the MWA can constrain the filling factor at an epoch when ~ 0.5 to within roughly +/- 0.1 at 2-sigma.Comment: 14 pages, 9 figures, submitted to Ap

Biomechanics of aquatic plants and its role in flow-vegetation interactions

River hydrodynamicsBed roughness and flow resistanc

Gallus GBrowse: a unified genomic database for the chicken

Gallus GBrowse (http://birdbase.net/cgi-bin/gbrowse/gallus/) provides online access to genomic and other information about the chicken, Gallus gallus. The information provided by this resource includes predicted genes and Gene Ontology (GO) terms, links to Gallus In Situ Hybridization Analysis (GEISHA), Unigene and Reactome, the genomic positions of chicken genetic markers, SNPs and microarray probes, and mappings from turkey, condor and zebra finch DNA and EST sequences to the chicken genome. We also provide a BLAT server (http://birdbase.net/cgi-bin/webBlat) for matching user-provided sequences to the chicken genome. These tools make the Gallus GBrowse server a valuable resource for researchers seeking genomic information regarding the chicken and other avian species

Photogrammetry Measurements During a Tanking Test on the Space Shuttle External Tank, ET-137

On November 5, 2010, a significant foam liberation threat was observed as the Space Shuttle STS-133 launch effort was scrubbed because of a hydrogen leak at the ground umbilical carrier plate. Further investigation revealed the presence of multiple cracks at the tops of stringers in the intertank region of the Space Shuttle External Tank. As part of an instrumented tanking test conducted on December 17, 2010, a three dimensional digital image correlation photogrammetry system was used to measure radial deflections and overall deformations of a section of the intertank region. This paper will describe the experimental challenges that were overcome in order to implement the photogrammetry measurements for the tanking test in support of STS-133. The technique consisted of configuring and installing two pairs of custom stereo camera bars containing calibrated cameras on the 215-ft level of the fixed service structure of Launch Pad 39-A. The cameras were remotely operated from the Launch Control Center 3.5 miles away during the 8 hour duration test, which began before sunrise and lasted through sunset. The complete deformation time history was successfully computed from the acquired images and would prove to play a crucial role in the computer modeling validation efforts supporting the successful completion of the root cause analysis of the cracked stringer problem by the Space Shuttle Program. The resulting data generated included full field fringe plots, data extraction time history analysis, section line spatial analyses and differential stringer peak ]valley motion. Some of the sample results are included with discussion. The resulting data showed that new stringer crack formation did not occur for the panel examined, and that large amounts of displacement in the external tank occurred because of the loads derived from its filling. The measurements acquired were also used to validate computer modeling efforts completed by NASA Marshall Space Flight Center (MSFC)

Simultaneous Wavelength Translation and Amplitude Modulation of Single Photons from a Quantum Dot

Hybrid quantum information devices that combine disparate physical systems interacting through photons offer the promise of combining low-loss telecommunications wavelength transmission with high fidelity visible wavelength storage and manipulation. The realization of such systems requires control over the waveform of single photons to achieve spectral and temporal matching. Here, we experimentally demonstrate the simultaneous wavelength translation and amplitude modulation of single photons generated by a quantum dot emitting near 1300 nm with an exponentially-decaying waveform (lifetime $\approx$1.5 ns). Quasi-phase-matched sum-frequency generation with a pulsed 1550 nm laser creates single photons at 710 nm with a controlled amplitude modulation at 350 ps timescales.Comment: 5 pages, 4 figure

Universal expansion of vortex clusters in a dissipative two-dimensional superfluid

A large ensemble of quantum vortices in a superfluid may itself be treated as a novel kind of fluid that exhibits anomalous hydrodynamics. Here we consider the dynamics of vortex clusters with thermal friction, and present an analytic solution that uncovers a new universality class in the out-of-equilibrium dynamics of dissipative superfluids. We find that the long-time dynamics of the vorticity distribution is an expanding Rankine vortex (i.e.~top-hat distribution) independent of initial conditions. This highlights a fundamentally different decay process to classical fluids, where the Rankine vortex is forbidden by viscous diffusion. Numerical simulations of large ensembles of point vortices confirm the universal expansion dynamics, and further reveal the emergence of a frustrated lattice structure marked by strong correlations. We present experimental results in a quasi-two-dimensional Bose-Einstein condensate that are in excellent agreement with the vortex fluid theory predictions, demonstrating that the signatures of vortex fluid theory can be observed with as few as $N\sim 11$ vortices. Our theoretical, numerical, and experimental results establish the validity of the vortex fluid theory for superfluid systems.Comment: V1: 6 pages, 3 figures in main text. 5 pages, 5 figures in supplemental material. V2: Updated in response to reviewer comments: Improved introduction and discussion, additional simulation data provided in supplemental material

Prevalence of virulence genes in Enterococcus species isolated from companion animals and livestock

Enterococcus species have developed from being commensal bacteria to leading pathogens that cause infections in humans and animals. The gastrointestinal tract of mammals is the normal habitat of these species. Virulence factors are proteins that are produced by the bacterium which are used to enhance their pathogenicity. The objectives of this study were to isolate Enterococcus spp. from livestock and companion animals, differentiate between the different sub-species and detect the presence of important virulence genes. Rectal and saliva swabs were collected from dogs and cats, whereas only rectal swabs were collected from cattle and cloacal swabs from chickens. Presumptive Enterococcus was selected using Bile Esculin Azide (BEA) agar, and Enterococcus species were confirmed using the polymerase chain reaction (PCR) by amplifying the tuf gene. In order to differentiate between E. faecalis and E. faecium, a multiplex PCR was used to detect the SodA gene. The genes responsible for gelatinase production (gelE) and for conjugation (ccf) were also detected using PCR. Out of 211 animal swabs, 182 (86%) were positive for the tuf gene. Overall, there were 55 isolates of E. faecalis (30%) compared to 22 isolates of E. faecium (12%). The virulence genes had a prevalence of 52% and 36% for gelE and ccf, respectively, in all animal hosts. The results demonstrated that chicken cloacal samples had the highest prevalence for E. faecalis, gelE and ccf genes compared to all the other isolates detected from other animal hosts. The results also demonstrated a statistically significant (p < 0.05) association between the prevalence of virulence genes (gelE and ccf) and animal species from which Enterococcus spp. was isolated. We provided evidence that healthy livestock and companion animals can harbour pathogenic Enterococcus that can be transferred via the food chain as well as through close association such as petting and licking of humans. This study partially demonstrated that Enterococci spp. are capable of evolving from being simple commensal bacteria to becoming pathogens that cause infection in humans and animals through the acquisition of virulence factors through mobile genetic elements