Optical properties and charge distribution in rod-shape DNA-silver cluster emitters

While the atomic structure of DNA_Agn clusters remains unknown many efforts have been made to understand the photophysical properties of this type of systems. It is known that partial oxidation of the silver cluster is necessary for generation of fluorescent emitters. In this sense, the rod-shape model proposed by Gwinn and coworkers (D. Schultz, K. Gardner, S. S. R. Oemrawsingh, N. Marke?evic, K. Olsson, M. Debord, D. Bouwmeester, and E. Gwinn, Adv. Mater., 2013, 25, 2797-2803), based on the idea that a neutral rod is generated with Ag+ acting as a ?glue? in between the neutral rod and the DNA bases, is a good approximation in order to explain experimental results. With the aim to shed light towards the understanding of these systems, we explore the electronic dynamics and charge distribution in zigzag rod-shape DNA_Agn clusters, using the Ag0/Ag+ stoichiometry found experimentally.Fil: Taccone, Martín Ignacio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Berdakin, Matias. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Pino, Gustavo Ariel. Universidad de Chile; ChileFil: Sanchez, Cristian Gabriel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentin

Spin-Polarized Tunable Photocurrents

Harnessing the unique features of topological materials for the development of a new generation of topological based devices is a challenge of paramount importance. Using Floquet scattering theory combined with atomistic models we study the interplay among laser illumination, spin, and topology in a two-dimensional material with spin-orbit coupling. Starting from a topological phase, we show how laser illumination can selectively disrupt the topological edge states depending on their spin. This is manifested by the generation of pure spin photocurrents and spin-polarized charge photocurrents under linearly and circularly polarized laser illumination, respectively. Our results open a path for the generation and control of spin-polarized photocurrents.Fil: Berdakin, Matias. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Química Teórica y Computacional; ArgentinaFil: Rodríguez Mena, Esteban A.. Universidad de Chile; ChileFil: Foa Torres, Luis Eduardo Francisco. Universidad de Chile; Chile. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin

Excited States of Proton-bound DNA/RNA Base Homo-dimers: Pyrimidines

We are presenting the electronic photo fragment spectra of the protonated pyrimidine DNA bases homo-dimers. Only the thymine dimer exhibits a well structured vibrational progression, while protonated monomer shows broad vibrational bands. This shows that proton bonding can block some non radiative processes present in the monomer.Comment: We acknowledge the use of the computing facility cluster GMPCS of the LUMAT federation (FR LUMAT 2764

The Effect of Ag+ on the Excited State Properties of Gas Phase (Cytosine)2Ag+ Complex: Electronic Transition and Estimated Lifetime

International audienceRecently, DNA molecules have received great attention because of their potential applications in material science. One interesting example is the production of highly fluorescent and tunable DNA-Agn clusters with cytosine (C) rich DNA strands. Here, we report the UV photofragmentation spectra of gas phase Cytosine...Ag+...Cytosine (C2Ag+) and Cytosine...H+...Cytosine (C2H+) complexes together with theoretical calculations. In both cases the excitation energy does not differ significantly from that of isolated cytosine or protonated-cytosine indicating that the excitation takes place on the DNA base. However, the excited state lifetime of the C2H+ ( = 85 fs), estimated from the bandwidth of the spectrum, is at least two orders of magnitude shorter than that of the C2Ag+ ( > 5300 fs). The increased excited state lifetime upon silver complexation is quite unexpected and it clearly opens the question about what factors are controlling the non-radiative decay in pyrimidine DNA bases? This is an important result for the expanding field of metal-mediated base pairing, and may also be important to the photophysical properties of DNA-templated, fluorescent silver clusters

Excited states of protonated DNA/RNA bases

International audienceThe very fast relaxation of the excited states to the ground state in DNA/RNA bases is a necessary process to ensure the photostability of DNA and its rate is highly sensitive to the tautomeric form of the bases. Protonation of the bases plays a crucial role in many biochemical and mutagenic processes and it can result in alternative tautomeric structures, thus making important the knowledge of the properties of protonated DNA/RNA bases. We report here the photofragmentation spectra of the five protonated DNA/RNA bases. In most of the cases, the spectra exhibit well resolved vibrational structures, with broad bands associated with very short excited state lifetimes. The similarity between the electronic properties e.g. excitation energy and very short excited state lifetimes for the canonical tautomers of protonated and neutral DNA bases, suggests that the former could also play an important role in the photostability mechanism of DNA

Excited States of Proton-Bound DNA/RNA Base Homodimers: Pyrimidines

We are presenting the electronic photofragment spectra of the protonated pyrimidine DNA base homodimers. Only the thymine dimer exhibits a well structured vibrational progression, while the protonated monomer shows broad vibrational bands. This shows that proton bonding can block some nonradiative processes present in the monomer.Fil: Feraud, Geraldine. Centre National de la Recherche Scientifique; FranciaFil: Berdakin, Matias. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Dedonder Lardeux, Claude. Centre National de la Recherche Scientifique; FranciaFil: Jouvet, Christophe. Centre National de la Recherche Scientifique; FranciaFil: Pino, Gustavo Ariel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentin

On the Ag+-Cytosine interaction: effect of microhydration probed by IR optical spectroscopy and density functional theory

The gas-phase structures of cytosine–Ag+ [CAg]+ and cytosine–Ag+–H2O [CAg–H2O]+ complexes have been studied by mass-selected infrared multiphoton dissociation (IRMPD) spectroscopy in the 900–1800 cm−1 spectral region using the Free Electron Laser facility in Orsay (CLIO). The IRMPD experimental spectra have been compared with the calculated IR absorption spectra of the different low-lying isomers (computed at the DFT level using the B3LYP functional and the 6-311G++(d,p) basis set for C, H, N and O atoms and the Stuttgart effective core potential for Ag). For the [CAg]+ complex, only one isomer with cytosine in the keto-amino (KA) tautomeric form and Ag+ interacting simultaneously with the C(2)[double bond, length as m-dash]O(7) group and N(3) of cytosine was observed. However, the mono-hydration of the complex in the gas phase leads to the stabilization of a two quasi-isoenergetic structure of the [CAg–H2O]+ complex, in which Ag+ interacts with the O atom of the water molecule and with the N(3) or C(2)[double bond, length as m-dash]O(7) group of cytosine. The relative populations of the two isomers determined from the IRMPD kinetics plot are in good agreement with the calculated values. Comparison of these results with those of protonated cytosine [CH]+ and its mono-hydrated complex [CH–H2O]+ shows some interesting differences between H+ and Ag+. In particular, while a single water molecule catalyzes the isomerization reaction in the case of [CH–H2O]+, it is found that in the case of [CAg–H2O]+ the addition of water leads to the stabilization of two isomers separated by small energy barrier (0.05 eV).Fil: Berdakin, Matias. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Steinmetz, Vincent. Université Paris Sud; FranciaFil: Maitre, Philippe. Université Paris Sud; FranciaFil: Pino, Gustavo Ariel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentin

Interplay between Intra- And Interband Transitions Associated with the Plasmon-Induced Hot Carrier Generation Process in Silver and Gold Nanoclusters

In the last decades, theoretical and experimental studies of nanostructured materials have gathered the efforts of a big slice of the scientific community. Light-nanostructure interaction has been a preponderant research topic fueled by the interest in the plasmonic properties of metallic nanostructures. More recently, the study of plasmon-induced hot carrier generation has drawn the attention of scientists because of their potential application in optoelectronics, photovoltaics, and photocatalysis. In this contribution, we study the real-time electronic dynamics associated with the generation of hot carriers in silver and gold nanoparticles focusing on their energy distribution and atomic shell population/depopulation dynamics. Revisiting our previous results from the perspective of a generalized 2D correlation analysis paves the way to disentangle complex dynamic outcomes, such as the dissipation of the sp-band energy absorbed during plasmonic excitation. We show that this mechanism is founded on the dynamic cross-correlation between sp-band and d-band electronic populations.Fil: Berdakin, Matias. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Douglas Gallardo, Oscar Alejandro. Universidad de Concepción; Chile. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Sanchez, Cristian Gabriel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Interdisciplinario de Ciencias Básicas. - Universidad Nacional de Cuyo. Instituto Interdisciplinario de Ciencias Básicas; Argentin

Plasmon-induced hot-carrier generation differences in gold and silver nanoclusters

In the last thirty years, the study of plasmonic properties of noble metal nanostructures has become a very dynamic research area. The design and manipulation of matter in the nanometric scale demands a deep understanding of the underlying physico-chemical processes that operate in this size regimen. Here, a fully atomistic study of the spectroscopic and photodynamic properties of different icosahedral silver and gold nanoclusters has been carried out by using a Time-Dependent Density Functional Tight-Binding (TD-DFTB) model. The optical absorption spectra of different icosahedral silver and gold nanoclusters of diameters between 1 and 4 nanometers have been simulated. Furthermore, the energy absorption process has been quantified by means of calculating a fully quantum absorption cross-section using the information contained in the reduced single-electron density matrix. This approach allows us take into account the quantum confinement effects dominating in this size regime. Likewise, the plasmon-induced hot-carrier generation process under laser illumination has been explored from a fully dynamical perspective. We have found noticeable differences in the energy absorption mechanisms and the plasmon-induced hot-carrier generation process in both metals which can be explained by their respective electronic structures. These differences can be attributed to the existence of ultra-fast electronic dissipation channels in gold nanoclusters that are absent in silver nanoclusters. To the best of our knowledge, this is the first report that addresses this topic from a real time fully atomistic time-dependent approach.Fil: Douglas Gallardo, Oscar Alejandro. Universidad de Concepción; Chile. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Berdakin, Matias. Universidad Nacional de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Frauenheim, Thomas. Universitat Bremen; AlemaniaFil: Sanchez, Cristian Gabriel. Universidad Nacional de Cuyo. Facultad de Ciencias Exactas y Naturales. Nodo Simulaciones Numericas, Modelado y Sistemas Complejos.; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin

Plasmon-Induced Hot-Carrier Generation differences in Gold and Silver Nanoclusters

In the last thirty years, the study of plasmonic properties of noble metal nanostructures has become a very dynamic research area. The design and manipulation of matter in the nanometric scale demand a deep understanding of the underlying physico-chemical processes that operate in this size regimen. Here, a fully atomistic study of the spectroscopic and photodynamic properties of different icosahedral silver and gold nanoclusters have been carried out by using Time-Dependent Density Functional Tight-Binding (TD-DFTB) model. Optical absorption spectra of different icosahedral silver and gold nanoclusters of diameters between 1 and 4 nanometers has been simulated. Furthermore, the energy absorption process have been quantified by means of calculating a fully quantum absorption cross-section using the information contained in the reduced single-electron density matrix. This approach allows us take into account for the quantum confinement effects dominating in this size regime. Likewise, the plasmon-induced hot-carrier generation process under laser illuminations have been explored from a fully dynamical perspective. We have found noticeable differences in the energy absorption mechanisms and the plasmon-induced hot-carrier generation process in both metals which can be explained by their respective electronic structures. These difference can be attributed to the existence of ultra-fast electronic dissipation channels in gold nanoclusters that are absented in silver nanoclusters. To the best of our knowledge, this is the first report that addresses this topic from a real time fully atomistic time-dependent approach. <br /