III.—Further Remarks on the Coniston Limestone

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Tracking Vector Magnetograms with the Magnetic Induction Equation

The differential affine velocity estimator (DAVE) developed in Schuck (2006) for estimating velocities from line-of-sight magnetograms is modified to directly incorporate horizontal magnetic fields to produce a differential affine velocity estimator for vector magnetograms (DAVE4VM). The DAVE4VM's performance is demonstrated on the synthetic data from the anelastic pseudospectral ANMHD simulations that were used in the recent comparison of velocity inversion techniques by Welsch (2007). The DAVE4VM predicts roughly 95% of the helicity rate and 75% of the power transmitted through the simulation slice. Inter-comparison between DAVE4VM and DAVE and further analysis of the DAVE method demonstrates that line-of-sight tracking methods capture the shearing motion of magnetic footpoints but are insensitive to flux emergence -- the velocities determined from line-of-sight methods are more consistent with horizontal plasma velocities than with flux transport velocities. These results suggest that previous studies that rely on velocities determined from line-of-sight methods such as the DAVE or local correlation tracking may substantially misrepresent the total helicity rates and power through the photosphere.Comment: 30 pages, 13 figure

The Effect of Particle Strength on the Ballistic Resistance of Shear Thickening Fluids

The response of shear thickening fluids (STFs) under ballistic impact has received considerable attention due to its field-responsive nature. While efforts have primarily focused on the response of traditional ballistic fabrics impregnated with fluids, the response of pure STFs to penetration has received limited attention. In the present study, the ballistic response of pure STFs is investigated and the effect of fluid density and particle strength on ballistic performance is isolated. The loss of ballistic resistance of STFs at higher impact velocities is governed by particle strength, indicating the range of velocities over which they may provide effective armor solutions.Comment: 4 pages, 4 figure

Induced Gamma-band Activity Elicited by Visual Representation of Unattended Objects

Peer reviewedPostprin

Direct calculation of the hard-sphere crystal/melt interfacial free energy

We present a direct calculation by molecular-dynamics computer simulation of the crystal/melt interfacial free energy, $\gamma$, for a system of hard spheres of diameter $\sigma$. The calculation is performed by thermodynamic integration along a reversible path defined by cleaving, using specially constructed movable hard-sphere walls, separate bulk crystal and fluid systems, which are then merged to form an interface. We find the interfacial free energy to be slightly anisotropic with $\gamma$ = 0.62$\pm 0.01$, 0.64$\pm 0.01$ and 0.58$\pm 0.01 k_BT/\sigma^2$ for the (100), (110) and (111) fcc crystal/fluid interfaces, respectively. These values are consistent with earlier density functional calculations and recent experiments measuring the crystal nucleation rates from colloidal fluids of polystyrene spheres that have been interpreted [Marr and Gast, Langmuir {\bf 10}, 1348 (1994)] to give an estimate of $\gamma$ for the hard-sphere system of $0.55 \pm 0.02 k_BT/\sigma^2$, slightly lower than the directly determined value reported here.Comment: 4 pages, 4 figures, submitted to Physical Review Letter

Capturing Shape Information with Multi-Scale Topological Loss Terms for 3D Reconstruction

Reconstructing 3D objects from 2D images is both challenging for our brains and machine learning algorithms. To support this spatial reasoning task, contextual information about the overall shape of an object is critical. However, such information is not captured by established loss terms (e.g. Dice loss). We propose to complement geometrical shape information by including multi-scale topological features, such as connected components, cycles, and voids, in the reconstruction loss. Our method uses cubical complexes to calculate topological features of 3D volume data and employs an optimal transport distance to guide the reconstruction process. This topology-aware loss is fully differentiable, computationally efficient, and can be added to any neural network. We demonstrate the utility of our loss by incorporating it into SHAPR, a model for predicting the 3D cell shape of individual cells based on 2D microscopy images. Using a hybrid loss that leverages both geometrical and topological information of single objects to assess their shape, we find that topological information substantially improves the quality of reconstructions, thus highlighting its ability to extract more relevant features from image datasets.Comment: Accepted at the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI