140 research outputs found

    Preliminary results from characterization of the Iberian Peninsula sturgeon based on analysis of the mtDNA cytochrome b

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    Historically, the Atlantic sturgeon Acipenser sturio L., 1758 was considered the only sturgeon species that inhabited rivers of the Iberian Peninsula. Nevertheless, in a recent paper, Garrido- Ramos et al. (1997) identified specimen EBD 8174 (museum collection of the Doñana Biological Station, Spain), from the Guadalquivir River, as the Adriatic sturgeon Acipenser naccarii Bonaparte, 1836, suggesting that both A. sturio and A. naccarii could be native to Spain. To test this theory, we compared partial mitochondrial cytochrome b (cyt b) gene sequences obtained from museum specimens of A. sturio that originated from the Iberian Peninsula, the Adriatic and the North Sea, as well as from live individuals of the Gironde River population in France. Specimens of A. naccarii and of the Siberian sturgeon Acipenser baerii Brandt, 1869 from fish farms were also included in the study. DNA from museum specimens was successfully amplified using the protocol of France and Kocher (1996) for DNA extraction from formalin-fixed and ethanol-preserved samples. Phylogenetic analysis was performed on partial cyt b gene sequences (over 402-bp and 245-bp). We identified specimen EBD 8174 as A. sturio, confirming the opinion that A. sturio is the only sturgeon species of the Iberian Peninsula. Further molecular analyses of museum specimens are needed for a description of the historical intraspecies genetic variation within A. sturio. This information is crucial for any future recovery plan for this species. Our comparison also showed interspecies sequence divergence ranging from 6.91% (A. sturio/A. naccarii) to 7.43% (A. sturio/A. baerii).Históricamente, el esturión atlántico Acipenser sturio L., 1758 ha sido considerado la única especie de esturión que vive en los ríos de la península Ibérica, siendo así demostrado por múltiples estudios morfológicos recientes. Sin embargo, un trabajo reciente identificó el ejemplar del río Guadalquivir EBD 8174 como Acipenser naccarii Bonaparte, 1836, sugiriendo que ambas especies de esturión podrían ser nativas de España. Para comprobar esta nueva teoría, se han analizado las secuencias del gen citocromo b mitocondrial en muestras de esturión atlántico preservadas en varios museos procedentes de la península Ibérica, el mar Adriático y el mar del Norte, así como material fresco del río Garona. Además, se han estudiado con fines comparativos varias muestras de A. naccarii y Acipenser baerii Brandt, 1869 procedentes de piscifactorías. Las muestras de museos fueron amplificadas con éxito usando un protocolo específico utilizado para material fijado en formol y preservado en alcohol. La muestra de esturión de España (EBD 8174) fue identificada como A. sturio. Este resulta do confirma que A. sturio es la única especie de esturión en la península Ibérica. De cualquier manera, antes de abordar los planes de recuperación, sería necesario realizar análisis moleculares complementarios para describir las posibles variaciones genéticas existentes entre poblaciones. La comparación de las secuencias de citocromo b de A. sturio con A. naccarii y A. baerii mostró valores de divergencia de 6,91% y 7,43% respectivamente.Instituto Español de Oceanografí

    Leve diferenciación genética entre los límites occidental y oriental de distribución de Astroides calycularis (Pallas, 1776) (Anthozoa, Scleractinia, Dendrophylliidae), inferida a partir de secuencias de COI e ITS

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    Understanding population genetic structure and differentiation among populations is useful for the elaboration of management and conservation plans of threatened species. In this study, we use nuclear and mitochondrial markers (internal transcribed spacers -ITS and cytochrome oxidase subunit one -COI) for phylogenetics and nested clade analyses (NCA), thus providing the first assessment of the genetic structure of the threatened Mediterranean coral Astroides calycularis (Pallas, 1766), based on samples from 12 localities along its geographic distribution range. Overall, we found no population differentiation in the westernmost region of the Mediterranean; however, a slight differentiation was observed when comparing this region with the Tyrrhenian and Algerian basins.El estudio de la estructura de las poblaciones y su diferenciación a nivel genético es de gran utilidad para la elaboración de planes de manejo y conservación de especies amenazadas. En este estudio, utilizamos marcadores nucleares y mitocondriales (espaciadores internos de genes ribosomales -ITS y citocromo oxidasa, subunidad I -COI) y métodos de análisis filogenéticos y de clados anidados (NCA), para realizar la primera valoración de la estructura genética del coral naranja Astroides calycularis (Pallas, 1766), una especie amenazada del Mediterráneo, a partir de muestras de 12 localidades a lo largo de su área de distribución. En las localidades situadas en la región más occidental del Mediterráneo se encontró cierta homogeneidad genética, mientras que al comparar estas localidades con las de las cuencas argelina y del mar Tirreno se observó una ligera diferenciación

    Phylogeographic patterns of Capreolus capreolus in the centre of the Iberian peninsula

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    One hundred and one samples of muscle tissue were obtained from roe deer in the centre of the Iberian peninsula. We compared the sequences of the control region (D–loop) of the mitochondrial DNA of these samples with those obtained in previous studies. Adding the information from microsatellite markers and derived genetic parameters to study the population structure, we found a philopatric structure, with females maintaining mitochondrial haplotype diversity, while males showed a pattern of genome homogenization. The population can thus be considered panmictic. Different times of palaeohistory of the species may explain these results: glacial–interglacial stages of the Pleistocene and the reduction and recovery of populations throughout the 20th century

    Mitochondrial and nuclear markers reveal a lack of genetic structure in the entocommensal nemertean Malacobdella arrokeana in the Patagonian gulfs

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    Abstract Malacobdella arrokeana is an entocommensal nemertean exclusively found in the bivalve geoduck Panopea abbreviata, and it is the only representative of the genus in the southern hemisphere. To characterize its genetic diversity, population structure and recent demographic history, we conducted the first genetic survey on this species, using sequence data for the cytochrome oxidase I gene (COI), 16S rRNA (16S) and the internal transcribed spacer (ITS2). Only four different ITS2 genotypes were found in the whole sample, and the two main haplotypes identified in the mitochondrial dataset were present among all localities with a diversity ranging from 0.583 to 0.939. Nucleotide diversity was low (p = 0.001?0.002). No significant genetic structure was detected between populations, and mismatch distribution patterns and neutrality tests results are consistent with a population in expansion or under selection. Analysis of molecular variance (AMOVA) revealed that the largest level of variance observed was due to intrapopulation variation (100, 100 and 94.39 % for 16S, COI and ITS2, respectively). Fst values were also non-significant. The observed lack of population structure is likely due to high levels of genetic connectivity in combination with the lack or permeability of biogeographic barriers and episodes of habitat modification.Fil: Fernandez Alfaya, Jose Elias. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; ArgentinaFil: Bigatti, Gregorio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; ArgentinaFil: Machordom, Annie. Consejo Superior de Investigaciones Cientificas. Museo Nacional de Cs. Naturales; Españ
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