2,204 research outputs found

    Interplay between positive and negative activities that influence the role of Bicoid in transcription

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    The Drosophila mophogenetic protein Bicoid (Bcd) can activate transcription in a concentration-dependent manner in embryos. It contains a self-inhibitory domain that can interact with the co-repressor Sin3A. In this report, we study a Bcd mutant, Bcd(A57–61), which has a strengthened self-inhibitory function and is unable to activate the hb-CAT reporter in Drosophila cells, to analyze the role of co-factors in regulating Bcd function. We show that increased concentrations of the co-activator dCBP in cells can switch this protein from its inactive state to an active state on the hb-CAT reporter. The C-terminal portion of Bcd(A57–61) is required to mediate such activity-rescuing function of dCBP. Although capable of binding to DNA in vitro, Bcd(A57–61) is unable to access the hb enhancer element in cells, suggesting that its DNA binding defect is only manifested in a cellular context. Increased concentrations of dCBP restore not only the ability of Bcd(A57–61) to access the hb enhancer element in cells but also the occupancy of the general transcription factors TBP and TFIIB at the reporter promoter. These and other results suggest that an activator can undergo switches between its active and inactive states through sensing the opposing actions of positive and negative co-factors

    Ref-NMS: Breaking Proposal Bottlenecks in Two-Stage Referring Expression Grounding

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    The prevailing framework for solving referring expression grounding is based on a two-stage process: 1) detecting proposals with an object detector and 2) grounding the referent to one of the proposals. Existing two-stage solutions mostly focus on the grounding step, which aims to align the expressions with the proposals. In this paper, we argue that these methods overlook an obvious mismatch between the roles of proposals in the two stages: they generate proposals solely based on the detection confidence (i.e., expression-agnostic), hoping that the proposals contain all right instances in the expression (i.e., expression-aware). Due to this mismatch, current two-stage methods suffer from a severe performance drop between detected and ground-truth proposals. To this end, we propose Ref-NMS, which is the first method to yield expression-aware proposals at the first stage. Ref-NMS regards all nouns in the expression as critical objects, and introduces a lightweight module to predict a score for aligning each box with a critical object. These scores can guide the NMS operation to filter out the boxes irrelevant to the expression, increasing the recall of critical objects, resulting in a significantly improved grounding performance. Since Ref- NMS is agnostic to the grounding step, it can be easily integrated into any state-of-the-art two-stage method. Extensive ablation studies on several backbones, benchmarks, and tasks consistently demonstrate the superiority of Ref-NMS. Codes are available at: https://github.com/ChopinSharp/ref-nms.Comment: Appear in AAAI 2021, Codes are available at: https://github.com/ChopinSharp/ref-nm

    Cooperative three- and four- player quantum games

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    A cooperative multi-player quantum game played by 3 and 4 players has been studied. Quantum superposed operator is introduced in this work which solves the non-zero sum difficulty in previous treatment. The role of quantum entanglement of the initial state is discussed in details.Comment: 7 pages with 3 figures. To appear in Physics Letters

    Combustion Synthesis of Large Bulk Nanostructured Ni 65

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    A large bulk nanostructured Ni65Al21Cr14 alloy with dimensions of Φ 100 mm × 6 mm was produced by combustion synthesis technique followed with rapid solidification. The Ni65Al21Cr14 alloy was composed of γ′-Ni3Al/γ-Ni(Al, Cr) eutectic matrix and γ-Ni(Al, Cr) dendrite. The eutectic matrix consisted of 80–150 nm cuboidal γ′-Ni3Al and 2–5 nm γ-Ni(Al, Cr) boundary. The dentrite was comprised of high-density growth twins with about 3–20 nm in width. The nanostructured Ni65Al21Cr14 alloy exhibited simultaneously high fracture strength of 2200 MPa and good ductility of 26% in compression test

    Isospin dependence of projectile-like fragment production at intermediate energies

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    The cross sections of fragments produced in 140 AA MeV 40,48^{40,48}Ca + 9^9Be and 58,64^{58,64}Ni + 9^9Be reactions are calculated by the statistical abration-ablation(SAA) model and compared to the experimental results measured at the National Superconducting Cyclotron Laboratory (NSCL) at Michigan State University. The fragment isotopic and isotonic cross section distributions of 40^{40}Ca and 48^{48}Ca, 58^{58}Ni and 64^{64}Ni, 40^{40}Ca and 58^{58}Ni, and 48^{48}Ca and 64^{64}Ni are compared and the isospin dependence of the projectile fragmentation is studied. It is found that the isospin dependence decreases and disappears in the central collisions. The shapes of the fragment isotopic and isotonic cross section distributions are found to be very similar for symmetric projectile nuclei. The shapes of the fragment isotopic and isotonic distributions of different asymmetric projectiles produced in peripheral reactions are found very similar. The similarity of the distributions are related to the similar proton and neutron density distributions inside the nucleus in framework of the SAA model.Comment: 7 pages, 4 figures; to be published in Phys Rev

    iTRAQ-based quantitative proteomics analysis identifies host pathways modulated during toxoplasma gondii infection in swine

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    Toxoplasma gondii is a leading cause of foodborne illness and consumption of undercooked pig meat is a major risk factor for acquiring toxoplasmosis, which causes a substantial burden on society. Here, we used isobaric tags for relative and absolute quantification (iTRAQ) labelling coupled with liquid chromatography-tandem mass spectrometry (LC-MS/MS) to identify cellular proteins and pathways altered during T. gondii infection in pigs. We also used parallel reaction monitoring-based LC-MS/MS to verify the levels of protein expression of infected spleens and mesenteric lymph nodes (MLNs). At 6 days post-infection (dpi), 156, 391, 170, 292, and 200 differentially expressed proteins (DEPs) were detected in the brain, liver, lung, MLNs and spleen, respectively. At 18 dpi, 339, 351, 483, 388, and 303 DEPs were detected in the brain, liver, lung, MLNs and spleen, respectively. Although proteins involved in immune responses were upregulated in all infected tissues, protein expression signature in infected livers was dominated by downregulation of the metabolic processes. By weighted gene co-expression network analysis, we could further show that all proteins were clustered into 25 co-expression modules and that the pink module significantly correlated with the infection status. We also identified 163 potential anti-T. gondii proteins (PATPs) and provided evidence that two PATPs (HSP70.2 and PDIA3) can reduce T. gondii burden in porcine macrophages in vitro. This comprehensive proteomics analysis reveals new facets in the pathogenesis of T. gondii infection and identifies key proteins that may contribute to the pig’s defense against this infection

    catena-Poly[[(3-methyl­sulfanyl-1,2,4-thia­diazole-5-thiol­ato)sodium]di-μ-aqua-κ4 O:O]

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    The crystal structure of the title compound, [Na(C3H3N2S3)(H2O)2]n, features polymeric chains made up of O⋯O edge-shared NaSN(H2O)4 units running along the b axis. The Na+ ion and all non-H atoms of the thia­diazole ligand lie on a mirror plane
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