1,158 research outputs found
STELLA Facilitates Differentiation of Germ Cell and Endodermal Lineages of Human Embryonic Stem Cells
Stella is a developmentally regulated gene highly expressed in mouse embryonic stem (ES) cells and in primordial germ cells (PGCs). In human, the gene encoding the STELLA homologue lies on chromosome 12p, which is frequently amplified in long-term cultured human ES cells. However, the role played by STELLA in human ES cells has not been reported. In the present study, we show that during retinoic acid (RA)-induced differentiation of human ES cells, expression of STELLA follows that of VASA, a marker of germline differentiation. By contrast, human embryonal carcinoma cells express STELLA at a higher level compared with both karyotypically normal and abnormal human ES cell lines. We found that over-expression of STELLA does not interfere with maintenance of the stem cell state of human ES cells, but following retinoic acid induction it leads to up-regulation of germline- and endodermal-associated genes, whereas neural markers PAX6 and NEUROD1 are down-regulated. Further, STELLA over-expression facilitates the differentiation of human ES cells into BE12-positive cells, in which the expression of germline- and endodermal-associated genes is enriched, and suppresses differentiation of the neural lineage. Taken together, this finding suggests a role for STELLA in facilitating germline and endodermal differentiation of human ES cells
Stochastic slowdown in evolutionary processes
We examine birth--death processes with state dependent transition
probabilities and at least one absorbing boundary. In evolution, this describes
selection acting on two different types in a finite population where
reproductive events occur successively. If the two types have equal fitness the
system performs a random walk. If one type has a fitness advantage it is
favored by selection, which introduces a bias (asymmetry) in the transition
probabilities. How long does it take until advantageous mutants have invaded
and taken over? Surprisingly, we find that the average time of such a process
can increase, even if the mutant type always has a fitness advantage. We
discuss this finding for the Moran process and develop a simplified model which
allows a more intuitive understanding. We show that this effect can occur for
weak but non--vanishing bias (selection) in the state dependent transition
rates and infer the scaling with system size. We also address the Wright-Fisher
model commonly used in population genetics, which shows that this stochastic
slowdown is not restricted to birth-death processes.Comment: 8 pages, 3 figures, accepted for publicatio
On the interpretation of spin-polarized electron energy loss spectra
We study the origin of the structure in the spin-polarized electron energy
loss spectroscopy (SPEELS) spectra of ferromagnetic crystals. Our study is
based on a 3d tight-binding Fe model, with constant onsite Coulomb repulsion U
between electrons of opposite spin. We find it is not the total density of
Stoner states as a function of energy loss which determines the response of the
system in the Stoner region, as usually thought, but the densities of Stoner
states for only a few interband transitions. Which transitions are important
depends ultimately on how strongly umklapp processes couple the corresponding
bands. This allows us to show, in particular, that the Stoner peak in SPEELS
spectra does not necessarily indicate the value of the exchange splitting
energy. Thus, the common assumption that this peak allows us to estimate the
magnetic moment through its correlation with exchange splitting should be
reconsidered, both in bulk and surface studies. Furthermore, we are able to
show that the above mechanism is one of the main causes for the typical
broadness of experimental spectra. Finally, our model predicts that optical
spin waves should be excited in SPEELS experiments.Comment: 11 pages, 7 eps figures, REVTeX fil
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Fabric-based systems: model, tools, applications.
A Fabric Based System is a parameterized cellular architecture in which an array of computing cells communicates with an embedded processor through a global memory . This architecture is customizable to different classes of applications by funtional unit, interconnect, and memory parameters, and can be instantiated efficiently on platform FPGAs . In previous work, we have demonstrated the advantage of reconfigurable fabrics for image and signal processing applications . Recently, we have build a Fabric Generator, a Java-based toolset that greatly accelerates construction of the fabrics presented in. A module-generation library is used to define, instantiate, and interconnect cells' datapaths . FG generates customized sequencers for individual cells or collections of cells . We describe the Fabric-Based System model, the FG toolset, and concrete realizations offabric architectures generated by FG on the Altera Excalibur ARM that can deliver 4.5 GigaMACs/s (8/16 bit data, Multiply-Accumulate)
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New polymorphous computing fabric.
This paper introduces a new polymorphous computing Fabric well suited to DSP and Image Processing and describes its implementation on a Configurable System on a Chip (CSOC). The architecture is highly parameterized and enables customization of the synthesized Fabric to achieve high performance for a specific class of application. For this reason it can be considered to be a generic model for hardware accelerator synthesis from a high level specification. Another important innovation is the Fabric uses a global memory concept, which gives the host processor random access to all the variables and instructions on the Fabric. The Fabric supports different computing models including MIMD, SPMD and systolic flow and permits dynamic reconfiguration. We present a specific implementation of a bank of FIR filters on a Fabric composed of 52 cells on the Altera Excalibur ARM running at 33 MHz. The theoretical performance of this Fabric is 1.8 GMACh. For the FIR application we obtain 1.6 GMAC/s real performance. Some automatic tools have been developed like the tool to provide a host access utility and assembler
Microwave Spectroscopy
Contains reports on five research projects.United States Army Signal Corps (Contract DA36-039-sc-87376
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