Immunity of intersubband polaritons to inhomogeneous broadening

We demonstrate that intersubband (ISB) polaritons are robust to inhomogeneous effects originating from the presence of multiple quantum wells (MQWs). In a series of samples that exhibit mid-infrared ISB absorption transitions with broadenings varying by a factor of 5 (from 4 meV to 20meV), we have observed polariton linewidths always lying in the 4 - 7 meV range only. We have experimentally verified the dominantly inhomogeneous origin of the broadening of the ISB transition, and that the linewidth reduction effect of the polariton modes persists up to room-temperature. This immunity to inhomogeneous broadening is a direct consequence of the coupling of the large number of ISB oscillators to a single photonic mode. It is a precious tool to gauge the natural linewidth of the ISB plasmon , that is otherwise masked in such MQWs system , and is also beneficial in view of perspective applications such as intersubband polariton lasers

Effect of charging on CdSe/CdS dot-in-rods single-photon emission

The photon statistics of CdSe/CdS dot-in-rods nanocrystals is studied with a method involving post-selection of the photon detection events based on the photoluminescence count rate. We show that flickering between two states needs to be taken into account to interpret the single-photon emission properties. With post-selection we are able to identify two emitting states: the exciton and the charged exciton (trion), characterized by different lifetimes and different second order correlation functions. Measurements of the second order autocorrelation function at zero delay with post- selection shows a degradation of the single photon emission for CdSe/CdS dot-in-rods in a charged state that we explain by deriving the neutral and charged biexciton quantum yields.Comment: 10 pages, 5 figure

A multilocus sequence analysis of Xanthomonas campestris reveals a complex structure within crucifer-attacking pathovars of this species

Previous classification of Xanthomonas campestris has defined six pathovars (aberrans, armoraciae, barbareae, campestris, incanae, and raphani) that cause diseases on cruciferous plants. However, pathogenicity assays with a range of strains and different hosts identifies only three types of symptom: black rot, leaf spot and bacterial blight. These findings raise the question of the genetic relatedness between strains assigned to different pathovars or symptom phenotypes. Here we have addressed this issue by multilocus sequence analysis of 42 strains. The X. campestris species was polymorphic at the 8 loci analysed and had a high genetic diversity; 23 sequence types were identified of which 16 were unique. All strains that induce black rot (pathovars aberrans and campestris) were genetically close but split in two groups. Only three clonal complexes were found, all within pathovar campestris. The assignment of the genome-sequenced strain 756C to pathovar raphani suggested from disease symptoms was confirmed, although this group of strains was particularly polymorphic. Strains belonging to pathovars barbareae and incanae were closely related, but distinct from pathovar campestris. There is evidence of genetic exchanges of housekeeping genes within this species as deduced from a clear incongruence between individual gene phylogenies and from network structures from SplitsTree analysis. Overall this study showed that the high genetic diversity derived equally from recombination and point mutation accumulation. However, X. campestris remains a species with a clonal evolution driven by a differential adaptation to cruciferous hosts

Photon correlations for colloidal nanocrystals and their clusters

Images of semiconductor `dot in rods' and their small clusters are studied by measuring the second-order correlation function with a spatially resolving ICCD camera. This measurement allows one to distinguish between a single dot and a cluster and, to a certain extent, to estimate the number of dots in a cluster. A more advanced measurement is proposed, based on higher-order correlations, enabling more accurate determination of the number of dots in a small cluster. Nonclassical features of the light emitted by such a cluster are analyzed.Comment: 4 pages, 4 figure

High-resolution study of planktic foraminifera from the eastern Mediterranean over the last 13 cal ka BP

A unique high-resolution record from the Nile prodelta has been investigated in order to study past hydrological and climatic changes in the southeastern Levantine region over the last 13 cal ka BP. To this end, we used planktic foraminifera (accumulation rates, diversity, assemblages and size properties) as bioindicators of the ecological characteristics of the water column (temperature, salinity, primary production and hydrology). These characteristics were mainly connected to Nile discharges and thermohaline circulation which in turn were controlled by various global and regional climatic forcing factors (e.g., orbital forcing, African and Indian Monsoon, North Atlantic Oscillation (NAO)). Our data showed seven main climatic periods: 1) from 13.0 to 11.5 cal ka BP encompassing the Younger Dryas and characterized by rather cold productive and mixed waters; 2) from 11.5 to 10.1 cal ka BP matching the start of the Holocene and the onset of the African Humid Period (AHP). This period was defined by surface water warming and increasing stratification due to increased river outflow; 3) from 10.1 to 6.4 cal ka BP encompassing the Sapropel deposit (S1) and matching the maximum of the AHP with drastic ecological conditions and maximum water stratification. During this period, the dominant warm taxon Globigerinoides ruber increased significantly in size and accumulation rate marking an opportunistic behavior and a total adaptation to the less saline and stratified waters. After 8.8 cal ka BP, the increase in diversity marked a progressive return to normal conditions; 4) from 6.4 to 2.9 cal ka BP, a progressive aridification period was recorded and the planktic ecosystem returned progressively to equilibrium conditions due to the recovery of thermohaline circulation after S1 and the decrease in Nile runoff; 5) from 2.9 to 1.1 cal ka BP, particular dry conditions were recorded leading to a severe drop in planktic diversity. These conditions seemed to be connected to a negative state of the NAO marking the Roman Humid Period in the western Mediterranean and being anti-phased with the southeastern Mediterranean; 6) from 1.1 to 0.54 cal ka BP, a humid period was recorded matching the Medieval Warm Anomaly and this time connected to a positive NAO. The highest foraminiferal diversity was recorded and the increase in proportions of deep dwellers and eutrophic taxa marked highly productive and mixed waters; 7) from 0.54 cal ka BP to modern time encompassing the Little Ice Age and recorded in our data by a general aridity and surface water warming

Aggressive Emerging Pathovars of Xanthomonas arboricola Represent Widespread Epidemic Clones Distinct from Poorly Pathogenic Strains, as Revealed by Multilocus Sequence Typing

Deep and comprehensive knowledge of the genetic structure of pathogenic species is the cornerstone on which the design of precise molecular diagnostic tools is built. Xanthomonas arboricola is divided into pathovars, some of which are classified as quarantine organisms in many countries and are responsible for diseases on nut and stone fruit trees that have emerged worldwide. Recent taxonomic studies of the genus Xanthomonas showed that strains isolated from other hosts should be classified in X. arboricola, extending the host range of the species. To investigate the genetic structure of X. arboricola and the genetic relationships between highly pathogenic strains and strains apparently not relevant to plant health, we conducted multilocus sequence analyses on a collection of strains representative of the known diversity of the species. Most of the pathovars were clustered in separate monophyletic groups. The pathovars pruni, corylina, and juglandis, responsible for pandemics in specific hosts, were highly phylogenetically related and clustered in three distinct clonal complexes. In contrast, strains with no or uncertain pathogenicity were represented by numerous unrelated singletons scattered in the phylogenic tree. Depending on the pathovar, intra- and interspecies recombination played contrasting roles in generating nucleotide polymorphism. This work provides a population genetics framework for molecular epidemiological surveys of emerging plant pathogens within X. arboricola. Based on our results, we propose to reclassify three former pathovars of Xanthomonas campestris as X. arboricola pv. arracaciae comb. nov., X. arboricola pv. guizotiae comb. nov., and X. arboricola pv. zantedeschiae comb. nov. An emended description of X. arboricola Vauterin et al. 1995 is provided

RPANDA: an R package for macroevolutionary analyses on phylogenetic trees

A number of approaches for studying macroevolution using phylogenetic trees have been developed in the last few years. Here, we present RPANDA, an R package that implements model‐free and model‐based phylogenetic comparative methods for macroevolutionary analyses. The model‐free approaches implemented in RPANDA are recently developed approaches stemming from graph theory that allow summarizing the information contained in phylogenetic trees, computing distances between trees, and clustering them accordingly. They also allow identifying distinct branching patterns within single trees. RPANDA also implements likelihood‐based models for fitting various diversification models to phylogenetic trees. It includes birth–death models with i) constant, ii) time‐dependent and iii) environmental‐dependent speciation and extinction rates. It also includes models with equilibrium diversity derived from the coalescent process, as well as a likelihood‐based inference framework to fit the individual‐based model of Speciation by Genetic Differentiation, which is an extension of Hubbell's neutral theory of biodiversity. RPANDA can be used to (i) characterize trees by plotting their spectral density profiles (ii) compare trees and cluster them according to their similarities, (iii) identify and plot distinct branching patterns within trees, (iv) compare the fit of alternative diversification models to phylogenetic trees, (v) estimate rates of speciation and extinction, (vi) estimate and plot how these rates have varied with time and environmental variables and (vii) deduce and plot estimates of species richness through geological time. RPANDA provides investigators with a set of tools for exploring patterns in phylogenetic trees and fitting various models to these trees, thereby contributing to the ongoing development of phylogenetics in the life sciences

Analysis of a spatio-temporal advection-diffusion model for human behaviors during a catastrophic event

In this work, using the theory of first-order macroscopic crowd models, we introduce a compartmental advection-diffusion model, describing the spatio-temporal dynamics of a population in different human behaviors (alert, panic and control) during a catastrophic event. For this model, we prove the local existence, uniqueness and regularity of a solution, as well as the positivity and $L^1$--boundedness of this solution. Then, in order to study the spatio-temporal behavioral dynamics of a population during a catastrophic event, we present several numerical simulations for different evacuation scenarios.Comment: I will correct and modify some facts and I will submit again the new versio

Theory of coherent optical nonlinearities of intersubband transitions in semiconductor quantum wells

We theoretically study the coherent nonlinear response of electrons confined in semiconductor quantum wells under the effect of an electromagnetic radiation close to resonance with an intersubband transition. Our approach is based on the time-dependent Schr\"odinger-Poisson equation stemming from a Hartree description of Coulomb-interacting electrons. This equation is solved by standard numerical tools and the results are interpreted in terms of approximated analytical formulas. For growing intensity, we observe a redshift of the effective resonance frequency due to the reduction of the electric dipole moment and the corresponding suppression of the depolarization shift. The competition between coherent nonlinearities and incoherent saturation effects is discussed. The strength of the resulting optical nonlinearity is estimated across different frequency ranges from mid-IR to THz with an eye to ongoing experiments on Bose-Einstein condensation of intersubband polaritons and to the speculative exploration of quantum optical phenomena such as single-photon emission in the mid-IR and THz windows